Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Scarna17

Gene Name Gene ID Reads Annotation
Scarna17 ENSMUSG00000088689 0 small Cajal body-specific RNA 17 [Source:MGI Symbol;Acc:MGI:3819483]







Genes with expression patterns similar to Scarna17

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Trim66 ENSMUSG00000031026 3 1 - - 1.000 - - - tripartite motif-containing 66 [Source:MGI Symbol;Acc:MGI:2152406]
2. Scarna17 ENSMUSG00000088689 0 1 - - 1.000 - - - small Cajal body-specific RNA 17 [Source:MGI Symbol;Acc:MGI:3819483]
3. Gm12716 ENSMUSG00000081584 9 0.943 - - 0.943 - - - predicted gene 12716 [Source:MGI Symbol;Acc:MGI:3650738]
4. Arhgef38 ENSMUSG00000040969 6 0.943 - - 0.943 - - - Rho guanine nucleotide exchange factor (GEF) 38 [Source:MGI Symbol;Acc:MGI:1924919]
5. RP23-386K20.2 RP23-386K20.2 11 0.891 - - 0.891 - - -
6. Gsta1 ENSMUSG00000074183 0 0.864 - - 0.864 - - - glutathione S-transferase, alpha 1 (Ya) [Source:MGI Symbol;Acc:MGI:1095417]
7. Gm5356 ENSMUSG00000069962 9 0.864 - - 0.864 - - - predicted pseudogene 5356 [Source:MGI Symbol;Acc:MGI:3643649]
8. Krt28 ENSMUSG00000055937 4 0.864 - - 0.864 - - - keratin 28 [Source:MGI Symbol;Acc:MGI:1918093]
9. Gm4937 Gm4937 0 0.864 - - 0.864 - - -
10. Gm12198 ENSMUSG00000085564 18 0.864 - - 0.864 - - - predicted gene 12198 [Source:MGI Symbol;Acc:MGI:3650407]
11. Klri2 ENSMUSG00000043932 8 0.864 - - 0.864 - - - killer cell lectin-like receptor family I member 2 [Source:MGI Symbol;Acc:MGI:2443965]
12. Tlr1 ENSMUSG00000044827 9 0.864 - - 0.864 - - - toll-like receptor 1 [Source:MGI Symbol;Acc:MGI:1341295]
13. Gm14002 ENSMUSG00000086416 2 0.864 - - 0.864 - - - predicted gene 14002 [Source:MGI Symbol;Acc:MGI:3650401]
14. Gm26514 ENSMUSG00000097151 19 0.864 - - 0.864 - - - predicted gene, 26514 [Source:MGI Symbol;Acc:MGI:5477008]
15. mt-Nd4l ENSMUSG00000065947 12 0.864 - - 0.864 - - - mitochondrially encoded NADH dehydrogenase 4L [Source:MGI Symbol;Acc:MGI:102497]
16. Gm5570 ENSMUSG00000073045 3 0.864 - - 0.864 - - - predicted gene 5570 [Source:MGI Symbol;Acc:MGI:3644382]
17. Hoxd11 ENSMUSG00000042499 16 0.864 - - 0.864 - - - homeobox D11 [Source:MGI Symbol;Acc:MGI:96203]
18. Gm25188 ENSMUSG00000065847 6 0.864 - - 0.864 - - - predicted gene, 25188 [Source:MGI Symbol;Acc:MGI:5454965]
19. Gm2302 Gm2302 2 0.864 - - 0.864 - - -
20. Tcf23 ENSMUSG00000006642 5 0.864 - - 0.864 - - - transcription factor 23 [Source:MGI Symbol;Acc:MGI:1934960]
21. Gm5934 ENSMUSG00000084063 3 0.864 - - 0.864 - - - predicted gene 5934 [Source:MGI Symbol;Acc:MGI:3643862]
22. Gm136 ENSMUSG00000071015 1 0.864 - - 0.864 - - - predicted gene 136 [Source:MGI Symbol;Acc:MGI:2684982]
23. Spata21 ENSMUSG00000045004 3 0.864 - - 0.864 - - - spermatogenesis associated 21 [Source:MGI Symbol;Acc:MGI:3607787]
24. 2410057H14Rik 2410057H14Rik 1 0.864 - - 0.864 - - -
25. 1700066O22Rik ENSMUSG00000085800 0 0.864 - - 0.864 - - - RIKEN cDNA 1700066O22 gene [Source:MGI Symbol;Acc:MGI:1920651]
26. Fmo6 ENSMUSG00000095576 1 0.864 - - 0.864 - - - flavin containing monooxygenase 6 [Source:MGI Symbol;Acc:MGI:2681841]
27. 1700029H14Rik ENSMUSG00000031452 0 0.864 - - 0.864 - - - RIKEN cDNA 1700029H14 gene [Source:MGI Symbol;Acc:MGI:1913751]
28. Gm7984 ENSMUSG00000049891 3 0.864 - - 0.864 - - - predicted gene 7984 [Source:MGI Symbol;Acc:MGI:3645839]
29. Gm16073 ENSMUSG00000079915 0 0.864 - - 0.864 - - - predicted gene 16073 [Source:MGI Symbol;Acc:MGI:3802177]
30. Gm15527 ENSMUSG00000086946 1 0.864 - - 0.864 - - - predicted gene 15527 [Source:MGI Symbol;Acc:MGI:3782974]
31. Gm26819 ENSMUSG00000097033 3 0.864 - - 0.864 - - - predicted gene, 26819 [Source:MGI Symbol;Acc:MGI:5477313]
32. Dnase1 ENSMUSG00000005980 0 0.864 - - 0.864 - - - deoxyribonuclease I [Source:MGI Symbol;Acc:MGI:103157]
33. Cpa5 ENSMUSG00000029788 11 0.864 - - 0.864 - - - carboxypeptidase A5 [Source:MGI Symbol;Acc:MGI:1921899]
34. Gm15767 ENSMUSG00000086021 0 0.864 - - 0.864 - - - predicted gene 15767 [Source:MGI Symbol;Acc:MGI:3783209]
35. Pkp1 ENSMUSG00000026413 5 0.864 - - 0.864 - - - plakophilin 1 [Source:MGI Symbol;Acc:MGI:1328359]
36. Gm10490 ENSMUSG00000073290 2 0.864 - - 0.864 - - - predicted gene 10490 [Source:MGI Symbol;Acc:MGI:3642001]
37. Tex101 ENSMUSG00000062773 0 0.864 - - 0.864 - - - testis expressed gene 101 [Source:MGI Symbol;Acc:MGI:1930791]
38. Tmem72 ENSMUSG00000048108 3 0.864 - - 0.864 - - - transmembrane protein 72 [Source:MGI Symbol;Acc:MGI:2442707]
39. Gm16119 Gm16119 2 0.864 - - 0.864 - - -
40. Oaz3 ENSMUSG00000028141 3 0.864 - - 0.864 - - - ornithine decarboxylase antizyme 3 [Source:MGI Symbol;Acc:MGI:1858170]
41. Cpn2 ENSMUSG00000023176 3 0.864 - - 0.864 - - - carboxypeptidase N, polypeptide 2 [Source:MGI Symbol;Acc:MGI:1919006]
42. Pde6a ENSMUSG00000024575 9 0.864 - - 0.864 - - - phosphodiesterase 6A, cGMP-specific, rod, alpha [Source:MGI Symbol;Acc:MGI:97524]
43. Sbspon ENSMUSG00000032719 9 0.857 - - 0.857 - - - somatomedin B and thrombospondin, type 1 domain containing [Source:MGI Symbol;Acc:MGI:2684952]
44. Oxtr ENSMUSG00000049112 37 0.831 - - 0.831 - - - oxytocin receptor [Source:MGI Symbol;Acc:MGI:109147]
45. Gm16754 ENSMUSG00000097439 8 0.827 - - 0.827 - - - predicted gene, 16754 [Source:MGI Symbol;Acc:MGI:4439678]
46. Cntn4 ENSMUSG00000064293 29 0.826 - - 0.826 - - - contactin 4 [Source:MGI Symbol;Acc:MGI:1095737]
47. Gm12844 ENSMUSG00000084260 13 0.826 - - 0.826 - - - predicted gene 12844 [Source:MGI Symbol;Acc:MGI:3651053]
48. Ppapdc1a Ppapdc1a 23 0.814 - - 0.814 - - -
49. Cldn19 ENSMUSG00000066058 14 0.802 - - 0.802 - - - claudin 19 [Source:MGI Symbol;Acc:MGI:3033992]
50. Gm13648 ENSMUSG00000086549 21 0.791 - - 0.791 - - - predicted gene 13648 [Source:MGI Symbol;Acc:MGI:3652033]
51. Sstr3 ENSMUSG00000044933 6 0.78 - - 0.780 - - - somatostatin receptor 3 [Source:MGI Symbol;Acc:MGI:98329]
52. 1700007K09Rik 12 0.767 - - 0.767 - - - RIKEN cDNA 1700007K09 gene, transcript variant X1
53. Klhl14 ENSMUSG00000042514 45 0.766 - - 0.766 - - - kelch-like 14 [Source:MGI Symbol;Acc:MGI:1921249]
54. Stmnd1 ENSMUSG00000063529 14 0.759 - - 0.759 - - - stathmin domain containing 1 [Source:MGI Symbol;Acc:MGI:2686420]
55. Pax8 ENSMUSG00000026976 430 0.753 - - 0.753 - - - paired box 8 [Source:MGI Symbol;Acc:MGI:97492]
56. Nlrp10 ENSMUSG00000049709 16 0.749 - - 0.749 - - - NLR family, pyrin domain containing 10 [Source:MGI Symbol;Acc:MGI:2444084]
57. Gm5083 ENSMUSG00000089815 11 0.742 - - 0.742 - - - predicted gene 5083 [Source:MGI Symbol;Acc:MGI:3779454]
58. Gm14277 ENSMUSG00000084113 5 0.742 - - 0.742 - - - predicted gene 14277 [Source:MGI Symbol;Acc:MGI:3650350]
59. Rpl21-ps3 ENSMUSG00000060566 7 0.742 - - 0.742 - - - ribosomal protein L21, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3646431]
60. Chd5 ENSMUSG00000005045 7 0.727 - - 0.727 - - - chromodomain helicase DNA binding protein 5 [Source:MGI Symbol;Acc:MGI:3036258]
61. H2-DMb2 ENSMUSG00000037548 10 0.714 - - 0.714 - - - histocompatibility 2, class II, locus Mb2 [Source:MGI Symbol;Acc:MGI:95923]
62. Gna15 ENSMUSG00000034792 26 0.706 - - 0.706 - - - guanine nucleotide binding protein, alpha 15 [Source:MGI Symbol;Acc:MGI:95770]
63. Acss3 ENSMUSG00000035948 40 0.703 - - 0.703 - - - acyl-CoA synthetase short-chain family member 3 [Source:MGI Symbol;Acc:MGI:2685720]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA