Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Scarf2

Gene Name Gene ID Reads Annotation
Scarf2 ENSMUSG00000012017 2585 scavenger receptor class F, member 2 [Source:MGI Symbol;Acc:MGI:1858430]







Genes with expression patterns similar to Scarf2

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Scarf2 ENSMUSG00000012017 2585 6 1.000 1.000 1.000 1.000 1.000 1.000 scavenger receptor class F, member 2 [Source:MGI Symbol;Acc:MGI:1858430]
2. Anxa2 ENSMUSG00000032231 4432 1.659 0.808 - 0.851 - - - annexin A2 [Source:MGI Symbol;Acc:MGI:88246]
3. Dlst ENSMUSG00000004789 1541 1.488 0.732 0.756 - - - - dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) [Source:MGI Symbol;Acc:MGI:1926170]
4. Zswim7 ENSMUSG00000014243 799 1.463 0.727 0.736 - - - - zinc finger SWIM-type containing 7 [Source:MGI Symbol;Acc:MGI:1916997]
5. Cyr61 ENSMUSG00000028195 563 1.411 0.703 0.708 - - - - cysteine rich protein 61 [Source:MGI Symbol;Acc:MGI:88613]
6. Tagap1 ENSMUSG00000052031 1290 0.916 0.916 - - - - - T cell activation GTPase activating protein 1 [Source:MGI Symbol;Acc:MGI:1919786]
7. AA987161 AA987161 597 0.915 0.915 - - - - -
8. Nsun3 ENSMUSG00000050312 572 0.902 0.902 - - - - - NOL1/NOP2/Sun domain family member 3 [Source:MGI Symbol;Acc:MGI:2146565]
9. Lrrc8c ENSMUSG00000054720 1420 0.901 0.901 - - - - - leucine rich repeat containing 8 family, member C [Source:MGI Symbol;Acc:MGI:2140839]
10. 4930522L14Rik ENSMUSG00000072762 481 0.896 0.896 - - - - - RIKEN cDNA 4930522L14 gene [Source:MGI Symbol;Acc:MGI:1925270]
11. Cklf ENSMUSG00000054400 589 0.896 0.896 - - - - - chemokine-like factor [Source:MGI Symbol;Acc:MGI:1922708]
12. Gm24056 ENSMUSG00000089242 346 0.894 0.894 - - - - - predicted gene, 24056 [Source:MGI Symbol;Acc:MGI:5453833]
13. Trit1 ENSMUSG00000028653 603 0.89 0.890 - - - - - tRNA isopentenyltransferase 1 [Source:MGI Symbol;Acc:MGI:1914216]
14. Lsm11 ENSMUSG00000044847 1665 0.885 0.885 - - - - - U7 snRNP-specific Sm-like protein LSM11 [Source:MGI Symbol;Acc:MGI:1919540]
15. Atl1 ENSMUSG00000021066 485 0.883 0.883 - - - - - atlastin GTPase 1 [Source:MGI Symbol;Acc:MGI:1921241]
16. Slc30a5 ENSMUSG00000021629 839 0.882 0.882 - - - - - solute carrier family 30 (zinc transporter), member 5 [Source:MGI Symbol;Acc:MGI:1916298]
17. Jmjd4 ENSMUSG00000036819 851 0.881 0.881 - - - - - jumonji domain containing 4 [Source:MGI Symbol;Acc:MGI:2144404]
18. Zfp697 ENSMUSG00000050064 638 0.879 0.879 - - - - - zinc finger protein 697 [Source:MGI Symbol;Acc:MGI:2139736]
19. Abr ENSMUSG00000017631 1461 0.878 0.878 - - - - - active BCR-related gene [Source:MGI Symbol;Acc:MGI:107771]
20. Loxl1 ENSMUSG00000032334 701 0.874 0.874 - - - - - lysyl oxidase-like 1 [Source:MGI Symbol;Acc:MGI:106096]
21. Aes ENSMUSG00000054452 6067 0.863 0.863 - - - - - amino-terminal enhancer of split [Source:MGI Symbol;Acc:MGI:95806]
22. Pecam1 ENSMUSG00000020717 1814 0.851 0.851 - - - - - platelet/endothelial cell adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:97537]
23. Wls ENSMUSG00000028173 4467 0.846 0.846 - - - - - wntless WNT ligand secretion mediator [Source:MGI Symbol;Acc:MGI:1915401]
24. Nbn ENSMUSG00000028224 1101 0.845 0.845 - - - - - nibrin [Source:MGI Symbol;Acc:MGI:1351625]
25. Cdh3 ENSMUSG00000061048 2519 0.84 0.840 - - - - - cadherin 3 [Source:MGI Symbol;Acc:MGI:88356]
26. Upp2 ENSMUSG00000026839 138 0.835 - - 0.835 - - - uridine phosphorylase 2 [Source:MGI Symbol;Acc:MGI:1923904]
27. Map3k1 ENSMUSG00000021754 2844 0.83 - 0.830 - - - - mitogen-activated protein kinase kinase kinase 1 [Source:MGI Symbol;Acc:MGI:1346872]
28. Tada2a ENSMUSG00000018651 1094 0.828 0.828 - - - - - transcriptional adaptor 2A [Source:MGI Symbol;Acc:MGI:2144471]
29. Cyp20a1 ENSMUSG00000049439 1294 0.826 0.826 - - - - - cytochrome P450, family 20, subfamily a, polypeptide 1 [Source:MGI Symbol;Acc:MGI:1925201]
30. Clspn ENSMUSG00000042489 2876 0.825 0.825 - - - - - claspin [Source:MGI Symbol;Acc:MGI:2445153]
31. Clpb ENSMUSG00000001829 1855 0.822 0.822 - - - - - ClpB caseinolytic peptidase B [Source:MGI Symbol;Acc:MGI:1100517]
32. Dgcr8 ENSMUSG00000022718, ENSMUSG00000106687 841 0.82 0.820 - - - - - DGCR8, microprocessor complex subunit [Source:MGI Symbol;Acc:MGI:2151114]
33. Slc12a9 ENSMUSG00000037344 666 0.819 - - 0.819 - - - solute carrier family 12 (potassium/chloride transporters), member 9 [Source:MGI Symbol;Acc:MGI:1933532]
34. Pdzrn3 ENSMUSG00000035357 1961 0.817 - 0.817 - - - - PDZ domain containing RING finger 3 [Source:MGI Symbol;Acc:MGI:1933157]
35. Pcmt1 ENSMUSG00000019795, ENSMUSG00000116405 2517 0.817 0.817 - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 [Source:MGI Symbol;Acc:MGI:97502]
36. Noa1 ENSMUSG00000036285 1081 0.815 0.815 - - - - - nitric oxide associated 1 [Source:MGI Symbol;Acc:MGI:1914306]
37. Pisd ENSMUSG00000023452 1396 0.814 0.814 - - - - - phosphatidylserine decarboxylase [Source:MGI Symbol;Acc:MGI:2445114]
38. Tmem14c ENSMUSG00000021361 2424 0.814 0.814 - - - - - transmembrane protein 14C [Source:MGI Symbol;Acc:MGI:1913404]
39. Tmem39a ENSMUSG00000002845 1066 0.814 - 0.814 - - - - transmembrane protein 39a [Source:MGI Symbol;Acc:MGI:1915096]
40. Lrrc3b ENSMUSG00000045201 96 0.812 - - 0.812 - - - leucine rich repeat containing 3B [Source:MGI Symbol;Acc:MGI:2384996]
41. Wrb ENSMUSG00000023147 2544 0.812 0.812 - - - - - tryptophan rich basic protein [Source:MGI Symbol;Acc:MGI:2136882]
42. Pitx1 ENSMUSG00000021506 2270 0.809 - - 0.809 - - - paired-like homeodomain transcription factor 1 [Source:MGI Symbol;Acc:MGI:107374]
43. Echs1 ENSMUSG00000025465 3845 0.805 - - 0.805 - - - enoyl Coenzyme A hydratase, short chain, 1, mitochondrial [Source:MGI Symbol;Acc:MGI:2136460]
44. N4bp1 ENSMUSG00000031652 1689 0.802 - 0.802 - - - - NEDD4 binding protein 1 [Source:MGI Symbol;Acc:MGI:2136825]
45. Rps27 ENSMUSG00000090733 17 0.8 - - 0.800 - - - ribosomal protein S27 [Source:MGI Symbol;Acc:MGI:1888676]
46. Aen ENSMUSG00000030609 963 0.8 - 0.800 - - - - apoptosis enhancing nuclease [Source:MGI Symbol;Acc:MGI:1915298]
47. Pvrl2 Pvrl2 3155 0.798 - 0.798 - - - -
48. Cdc42se1 ENSMUSG00000046722 1904 0.796 0.796 - - - - - CDC42 small effector 1 [Source:MGI Symbol;Acc:MGI:1889510]
49. Rinl ENSMUSG00000051735 71 0.796 - - 0.796 - - - Ras and Rab interactor-like [Source:MGI Symbol;Acc:MGI:2444024]
50. Ugcg ENSMUSG00000028381 2096 0.795 0.795 - - - - - UDP-glucose ceramide glucosyltransferase [Source:MGI Symbol;Acc:MGI:1332243]
51. Gm4944 968 0.795 0.795 - - - - - predicted gene 4944
52. Npr3 ENSMUSG00000022206 2321 0.794 - 0.794 - - - - natriuretic peptide receptor 3 [Source:MGI Symbol;Acc:MGI:97373]
53. Tgfbrap1 ENSMUSG00000070939 1413 0.793 - 0.793 - - - - transforming growth factor, beta receptor associated protein 1 [Source:MGI Symbol;Acc:MGI:2447427]
54. Gm25072 ENSMUSG00000092974 251 0.793 - - 0.793 - - - predicted gene, 25072 [Source:MGI Symbol;Acc:MGI:5454849]
55. Gfi1 ENSMUSG00000029275 21 0.792 - - 0.792 - - - growth factor independent 1 [Source:MGI Symbol;Acc:MGI:103170]
56. 4732491K20Rik ENSMUSG00000097350 92 0.791 - - 0.791 - - - RIKEN cDNA 4732491K20 gene [Source:MGI Symbol;Acc:MGI:3026975]
57. Six5 ENSMUSG00000040841 2834 0.79 - 0.790 - - - - sine oculis-related homeobox 5 [Source:MGI Symbol;Acc:MGI:106220]
58. Smoc2 ENSMUSG00000023886 712 0.786 - 0.786 - - - - SPARC related modular calcium binding 2 [Source:MGI Symbol;Acc:MGI:1929881]
59. Nus1 ENSMUSG00000023068 4291 0.785 0.785 - - - - - NUS1 dehydrodolichyl diphosphate synthase subunit [Source:MGI Symbol;Acc:MGI:1196365]
60. Ppie ENSMUSG00000028651 1271 0.785 0.785 - - - - - peptidylprolyl isomerase E (cyclophilin E) [Source:MGI Symbol;Acc:MGI:1917118]
61. Neat1 ENSMUSG00000092274 205 0.785 - - 0.785 - - - nuclear paraspeckle assembly transcript 1 (non-protein coding) [Source:MGI Symbol;Acc:MGI:1914211]
62. Fermt2 ENSMUSG00000037712 2474 0.785 0.785 - - - - - fermitin family member 2 [Source:MGI Symbol;Acc:MGI:2385001]
63. Ddt ENSMUSG00000001666 1681 0.784 0.784 - - - - - D-dopachrome tautomerase [Source:MGI Symbol;Acc:MGI:1298381]
64. Cyp4f16 ENSMUSG00000048440 183 0.783 - - 0.783 - - - cytochrome P450, family 4, subfamily f, polypeptide 16 [Source:MGI Symbol;Acc:MGI:1917351]
65. Ipo9 ENSMUSG00000041879 7282 0.783 - 0.783 - - - - importin 9 [Source:MGI Symbol;Acc:MGI:1918944]
66. Tac2 ENSMUSG00000025400 746 0.783 - - 0.783 - - - tachykinin 2 [Source:MGI Symbol;Acc:MGI:98476]
67. Tmbim1 ENSMUSG00000006301 297 0.782 - - 0.782 - - - transmembrane BAX inhibitor motif containing 1 [Source:MGI Symbol;Acc:MGI:1916910]
68. Zfp91 ENSMUSG00000024695 4157 0.781 0.781 - - - - - zinc finger protein 91 [Source:MGI Symbol;Acc:MGI:104854]
69. Fastkd1 ENSMUSG00000027086 217 0.78 - - 0.780 - - - FAST kinase domains 1 [Source:MGI Symbol;Acc:MGI:2444596]
70. Fam179b 2386 0.78 0.780 - - - - - family with sequence similarity 179, member B, transcript variant X5
71. Gigyf2 ENSMUSG00000048000 2033 0.779 - 0.779 - - - - GRB10 interacting GYF protein 2 [Source:MGI Symbol;Acc:MGI:2138584]
72. Chd8 ENSMUSG00000053754 3885 0.778 - - 0.778 - - - chromodomain helicase DNA binding protein 8 [Source:MGI Symbol;Acc:MGI:1915022]
73. Ptpn21 ENSMUSG00000021009 282 0.777 0.777 - - - - - protein tyrosine phosphatase, non-receptor type 21 [Source:MGI Symbol;Acc:MGI:1344406]
74. Runx2 ENSMUSG00000039153 319 0.774 - - 0.774 - - - runt related transcription factor 2 [Source:MGI Symbol;Acc:MGI:99829]
75. Kctd20 ENSMUSG00000005936 2088 0.774 0.774 - - - - - potassium channel tetramerisation domain containing 20 [Source:MGI Symbol;Acc:MGI:1914239]
76. Odf2l ENSMUSG00000028256 245 0.773 - - 0.773 - - - outer dense fiber of sperm tails 2-like [Source:MGI Symbol;Acc:MGI:1098600]
77. Cdk14 ENSMUSG00000028926 1781 0.773 0.773 - - - - - cyclin-dependent kinase 14 [Source:MGI Symbol;Acc:MGI:894318]
78. Dok4 ENSMUSG00000040631 143 0.771 0.771 - - - - - docking protein 4 [Source:MGI Symbol;Acc:MGI:2148865]
79. Zadh2 ENSMUSG00000049090 1018 0.77 0.770 - - - - - zinc binding alcohol dehydrogenase, domain containing 2 [Source:MGI Symbol;Acc:MGI:2444835]
80. Rgs3 ENSMUSG00000059810 1089 0.77 - 0.770 - - - - regulator of G-protein signaling 3 [Source:MGI Symbol;Acc:MGI:1354734]
81. Kcnk2 ENSMUSG00000037624 670 0.769 - - 0.769 - - - potassium channel, subfamily K, member 2 [Source:MGI Symbol;Acc:MGI:109366]
82. Rfc1 ENSMUSG00000029191 4343 0.769 0.769 - - - - - replication factor C (activator 1) 1 [Source:MGI Symbol;Acc:MGI:97891]
83. Anxa5 ENSMUSG00000027712 2404 0.767 0.767 - - - - - annexin A5 [Source:MGI Symbol;Acc:MGI:106008]
84. Mib2 ENSMUSG00000029060 369 0.767 - - 0.767 - - - mindbomb E3 ubiquitin protein ligase 2 [Source:MGI Symbol;Acc:MGI:2679684]
85. Lipa ENSMUSG00000024781 1278 0.767 - 0.767 - - - - lysosomal acid lipase A [Source:MGI Symbol;Acc:MGI:96789]
86. Pcnxl3 Pcnxl3 1231 0.766 - 0.766 - - - -
87. Trip6 ENSMUSG00000023348 4183 0.766 0.766 - - - - - thyroid hormone receptor interactor 6 [Source:MGI Symbol;Acc:MGI:1343458]
88. Slc35c2 ENSMUSG00000017664 2381 0.765 - 0.765 - - - - solute carrier family 35, member C2 [Source:MGI Symbol;Acc:MGI:2385166]
89. Nfkbiz ENSMUSG00000035356 213 0.765 0.765 - - - - - nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta [Source:MGI Symbol;Acc:MGI:1931595]
90. Grhl3 ENSMUSG00000037188 211 0.765 - - 0.765 - - - grainyhead like transcription factor 3 [Source:MGI Symbol;Acc:MGI:2655333]
91. H6pd ENSMUSG00000028980 296 0.764 0.764 - - - - - hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) [Source:MGI Symbol;Acc:MGI:2140356]
92. Kbtbd13 ENSMUSG00000054978 79 0.764 - - 0.764 - - - kelch repeat and BTB (POZ) domain containing 13 [Source:MGI Symbol;Acc:MGI:1921742]
93. Neo1 ENSMUSG00000032340 4225 0.764 0.764 - - - - - neogenin [Source:MGI Symbol;Acc:MGI:1097159]
94. Plxnb1 ENSMUSG00000053646 2044 0.764 - 0.764 - - - - plexin B1 [Source:MGI Symbol;Acc:MGI:2154238]
95. Dsc2 ENSMUSG00000024331 374 0.763 - - 0.763 - - - desmocollin 2 [Source:MGI Symbol;Acc:MGI:103221]
96. Mcam ENSMUSG00000032135 610 0.762 - 0.762 - - - - melanoma cell adhesion molecule [Source:MGI Symbol;Acc:MGI:1933966]
97. Taf1b ENSMUSG00000059669 413 0.762 - 0.762 - - - - TATA-box binding protein associated factor, RNA polymerase I, B [Source:MGI Symbol;Acc:MGI:109577]
98. Pi4kb ENSMUSG00000038861 97 0.761 0.761 - - - - - phosphatidylinositol 4-kinase beta [Source:MGI Symbol;Acc:MGI:1334433]
99. Gm4149 ENSMUSG00000074800 1265 0.761 - 0.761 - - - - predicted pseudogene 4149 [Source:MGI Symbol;Acc:MGI:3782325]
100. Mcoln1 ENSMUSG00000004567 281 0.761 0.761 - - - - - mucolipin 1 [Source:MGI Symbol;Acc:MGI:1890498]

There are 323 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA