Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Scaf1

Gene Name Gene ID Reads Annotation
Scaf1 ENSMUSG00000038406 346 SR-related CTD-associated factor 1 [Source:MGI Symbol;Acc:MGI:2141980]







Genes with expression patterns similar to Scaf1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Scaf1 ENSMUSG00000038406 346 6 1.000 1.000 1.000 1.000 1.000 1.000 SR-related CTD-associated factor 1 [Source:MGI Symbol;Acc:MGI:2141980]
2. E130311K13Rik ENSMUSG00000048581 4352 0.922 - 0.922 - - - - RIKEN cDNA E130311K13 gene [Source:MGI Symbol;Acc:MGI:3607716]
3. Tcte2 ENSMUSG00000038347 342 0.862 - 0.862 - - - - t-complex-associated testis expressed 2 [Source:MGI Symbol;Acc:MGI:98641]
4. Adam8 ENSMUSG00000025473 88 0.842 - - - - 0.842 - a disintegrin and metallopeptidase domain 8 [Source:MGI Symbol;Acc:MGI:107825]
5. Ifnar2 ENSMUSG00000022971 1291 0.84 - 0.840 - - - - interferon (alpha and beta) receptor 2 [Source:MGI Symbol;Acc:MGI:1098243]
6. Vill ENSMUSG00000038775 297 0.838 - 0.838 - - - - villin-like [Source:MGI Symbol;Acc:MGI:1201781]
7. Filip1l ENSMUSG00000043336 937 0.834 - 0.834 - - - - filamin A interacting protein 1-like [Source:MGI Symbol;Acc:MGI:1925999]
8. Slc35g1 ENSMUSG00000044026 156 0.826 - - - - 0.826 - solute carrier family 35, member G1 [Source:MGI Symbol;Acc:MGI:2444789]
9. Ap5s1 ENSMUSG00000068264 205 0.82 0.820 - - - - - adaptor-related protein 5 complex, sigma 1 subunit [Source:MGI Symbol;Acc:MGI:1916846]
10. Mar-02_1 Mar-02_1 445 0.814 - 0.814 - - - -
11. Slc52a2 ENSMUSG00000022560 369 0.812 - 0.812 - - - - solute carrier protein 52, member 2 [Source:MGI Symbol;Acc:MGI:1289288]
12. Tm2d3 ENSMUSG00000078681 1166 0.804 - 0.804 - - - - TM2 domain containing 3 [Source:MGI Symbol;Acc:MGI:1915884]
13. Etfdh ENSMUSG00000027809 498 0.802 - - - - - 0.802 electron transferring flavoprotein, dehydrogenase [Source:MGI Symbol;Acc:MGI:106100]
14. Plxdc2 ENSMUSG00000026748 757 0.8 - 0.800 - - - - plexin domain containing 2 [Source:MGI Symbol;Acc:MGI:1914698]
15. Ly96 ENSMUSG00000025779 116 0.796 - 0.796 - - - - lymphocyte antigen 96 [Source:MGI Symbol;Acc:MGI:1341909]
16. A330023F24Rik ENSMUSG00000096929 33 0.793 - - - - - 0.793 RIKEN cDNA A330023F24 gene [Source:MGI Symbol;Acc:MGI:2443958]
17. Rasa3 ENSMUSG00000031453 708 0.792 - 0.792 - - - - RAS p21 protein activator 3 [Source:MGI Symbol;Acc:MGI:1197013]
18. Kcnip4 ENSMUSG00000029088 110 0.791 - 0.791 - - - - Kv channel interacting protein 4 [Source:MGI Symbol;Acc:MGI:1933131]
19. Gm19705 ENSMUSG00000097113 65 0.791 - 0.791 - - - - predicted gene, 19705 [Source:MGI Symbol;Acc:MGI:5011890]
20. Map3k12 ENSMUSG00000023050 648 0.79 - 0.790 - - - - mitogen-activated protein kinase kinase kinase 12 [Source:MGI Symbol;Acc:MGI:1346881]
21. A730071L15Rik ENSMUSG00000096923 22 0.79 0.790 - - - - - RIKEN cDNA A730071L15Rik gene [Source:MGI Symbol;Acc:MGI:3642498]
22. Atp10d ENSMUSG00000046808 78 0.787 - 0.787 - - - - ATPase, class V, type 10D [Source:MGI Symbol;Acc:MGI:2450125]
23. Gm20538 ENSMUSG00000091471 138 0.787 - 0.787 - - - - predicted gene 20538 [Source:MGI Symbol;Acc:MGI:5142003]
24. Fcrls ENSMUSG00000015852 76 0.787 - 0.787 - - - - Fc receptor-like S, scavenger receptor [Source:MGI Symbol;Acc:MGI:1933397]
25. Gm17191 ENSMUSG00000091587 14 0.785 - 0.785 - - - - predicted gene 17191 [Source:MGI Symbol;Acc:MGI:4938018]
26. Gm5741 ENSMUSG00000095845 17 0.785 - 0.785 - - - - predicted gene 5741 [Source:MGI Symbol;Acc:MGI:3645690]
27. Cables2 ENSMUSG00000038990 923 0.785 - 0.785 - - - - CDK5 and Abl enzyme substrate 2 [Source:MGI Symbol;Acc:MGI:2182335]
28. Cd82 ENSMUSG00000027215 59 0.785 - 0.785 - - - - CD82 antigen [Source:MGI Symbol;Acc:MGI:104651]
29. Mgll ENSMUSG00000033174 157 0.782 0.782 - - - - - monoglyceride lipase [Source:MGI Symbol;Acc:MGI:1346042]
30. 3830403N18Rik ENSMUSG00000031125 31 0.781 - 0.781 - - - - RIKEN cDNA 3830403N18 gene [Source:MGI Symbol;Acc:MGI:1917941]
31. Gm5532 ENSMUSG00000073535 47 0.781 - 0.781 - - - - predicted gene 5532 [Source:MGI Symbol;Acc:MGI:3646828]
32. 0610012G03Rik ENSMUSG00000107002 421 0.781 - 0.781 - - - - RIKEN cDNA 0610012G03 gene [Source:MGI Symbol;Acc:MGI:1913301]
33. Negr1 ENSMUSG00000040037 312 0.781 - 0.781 - - - - neuronal growth regulator 1 [Source:MGI Symbol;Acc:MGI:2444846]
34. Dlx5 ENSMUSG00000029755 23 0.779 - 0.779 - - - - distal-less homeobox 5 [Source:MGI Symbol;Acc:MGI:101926]
35. Pofut2 ENSMUSG00000020260 2675 0.777 - 0.777 - - - - protein O-fucosyltransferase 2 [Source:MGI Symbol;Acc:MGI:1916863]
36. Rfwd3 ENSMUSG00000033596 648 0.775 - 0.775 - - - - ring finger and WD repeat domain 3 [Source:MGI Symbol;Acc:MGI:2384584]
37. Slc46a3 ENSMUSG00000029650 39 0.774 - 0.774 - - - - solute carrier family 46, member 3 [Source:MGI Symbol;Acc:MGI:1918956]
38. Itgb1bp1 ENSMUSG00000062352 1388 0.774 - 0.774 - - - - integrin beta 1 binding protein 1 [Source:MGI Symbol;Acc:MGI:1306802]
39. Gm20663 ENSMUSG00000093378 49 0.773 - 0.773 - - - - predicted gene 20663 [Source:MGI Symbol;Acc:MGI:5313110]
40. Gm26822 ENSMUSG00000096921 421 0.772 - - - - - 0.772 predicted gene, 26822 [Source:MGI Symbol;Acc:MGI:5477316]
41. 5730577I03Rik 5730577I03Rik 79 0.772 - 0.772 - - - -
42. Fam160b2 ENSMUSG00000022095 538 0.771 - 0.771 - - - - family with sequence similarity 160, member B2 [Source:MGI Symbol;Acc:MGI:3036290]
43. Gm7308 ENSMUSG00000081113 54 0.771 - 0.771 - - - - predicted pseudogene 7308 [Source:MGI Symbol;Acc:MGI:3644558]
44. Rps6ka5 ENSMUSG00000021180 94 0.769 - 0.769 - - - - ribosomal protein S6 kinase, polypeptide 5 [Source:MGI Symbol;Acc:MGI:1920336]
45. Fam110a ENSMUSG00000027459 755 0.768 0.768 - - - - - family with sequence similarity 110, member A [Source:MGI Symbol;Acc:MGI:1921097]
46. Slc40a1 ENSMUSG00000025993 484 0.768 - 0.768 - - - - solute carrier family 40 (iron-regulated transporter), member 1 [Source:MGI Symbol;Acc:MGI:1315204]
47. B630019K06Rik ENSMUSG00000052364 523 0.768 0.768 - - - - - RIKEN cDNA B630019K06 gene [Source:MGI Symbol;Acc:MGI:2147918]
48. Glis1 ENSMUSG00000034762 166 0.766 - 0.766 - - - - GLIS family zinc finger 1 [Source:MGI Symbol;Acc:MGI:2386723]
49. Tnni2 ENSMUSG00000031097 62 0.765 - 0.765 - - - - troponin I, skeletal, fast 2 [Source:MGI Symbol;Acc:MGI:105070]
50. 4731419I09Rik ENSMUSG00000097004 89 0.765 - 0.765 - - - - RIKEN cDNA 4731419I09 gene [Source:MGI Symbol;Acc:MGI:3704222]
51. 2700016F22Rik ENSMUSG00000097731 59 0.765 - 0.765 - - - - RIKEN cDNA 2700016F22 gene [Source:MGI Symbol;Acc:MGI:1919807]
52. Krt7 ENSMUSG00000023039 391 0.764 - 0.764 - - - - keratin 7 [Source:MGI Symbol;Acc:MGI:96704]
53. Tdrd3 ENSMUSG00000022019 777 0.762 - 0.762 - - - - tudor domain containing 3 [Source:MGI Symbol;Acc:MGI:2444023]
54. Xkr8 ENSMUSG00000037752 188 0.76 - 0.760 - - - - X-linked Kx blood group related 8 [Source:MGI Symbol;Acc:MGI:2685877]
55. Trmt13 ENSMUSG00000033439 240 0.759 - - - - - 0.759 tRNA methyltransferase 13 [Source:MGI Symbol;Acc:MGI:1925219]
56. Snx8 ENSMUSG00000029560 535 0.758 - 0.758 - - - - sorting nexin 8 [Source:MGI Symbol;Acc:MGI:2443816]
57. Prpf40b ENSMUSG00000023007 1271 0.757 - - - - - 0.757 pre-mRNA processing factor 40B [Source:MGI Symbol;Acc:MGI:1925583]
58. Tmx4 ENSMUSG00000034723 1604 0.756 - - - - 0.756 - thioredoxin-related transmembrane protein 4 [Source:MGI Symbol;Acc:MGI:106558]
59. Itga5 ENSMUSG00000000555 28 0.756 0.756 - - - - - integrin alpha 5 (fibronectin receptor alpha) [Source:MGI Symbol;Acc:MGI:96604]
60. Sall1 ENSMUSG00000031665 769 0.755 - 0.755 - - - - spalt like transcription factor 1 [Source:MGI Symbol;Acc:MGI:1889585]
61. Vti1a ENSMUSG00000024983 189 0.754 0.754 - - - - - vesicle transport through interaction with t-SNAREs 1A [Source:MGI Symbol;Acc:MGI:1855699]
62. Gata2 ENSMUSG00000015053 838 0.754 - 0.754 - - - - GATA binding protein 2 [Source:MGI Symbol;Acc:MGI:95662]
63. Gm6768 ENSMUSG00000021908 225 0.753 - 0.753 - - - - predicted gene 6768 [Source:MGI Symbol;Acc:MGI:3648259]
64. Glb1l ENSMUSG00000026200 115 0.751 - 0.751 - - - - galactosidase, beta 1-like [Source:MGI Symbol;Acc:MGI:1921827]
65. Usp13 ENSMUSG00000056900 668 0.751 - 0.751 - - - - ubiquitin specific peptidase 13 (isopeptidase T-3) [Source:MGI Symbol;Acc:MGI:1919857]
66. 2610021A01Rik ENSMUSG00000091474 463 0.751 - 0.751 - - - - RIKEN cDNA 2610021A01 gene [Source:MGI Symbol;Acc:MGI:1922662]
67. Fam101b 1093 0.751 - - - - - 0.751 family with sequence similarity 101, member B
68. Adamts2 ENSMUSG00000036545 385 0.751 - 0.751 - - - - a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 2 [Source:MGI Symbol;Acc:MGI:1347356]
69. 1110020A21Rik ENSMUSG00000097047 49 0.75 0.750 - - - - - RIKEN cDNA 1110020A21 gene [Source:MGI Symbol;Acc:MGI:1915781]
70. Pkp3 ENSMUSG00000054065 110 0.75 - 0.750 - - - - plakophilin 3 [Source:MGI Symbol;Acc:MGI:1891830]
71. ATF7 ATF7 652 0.75 - 0.750 - - - -
72. Gm16938 ENSMUSG00000097749 62 0.749 - 0.749 - - - - predicted gene, 16938 [Source:MGI Symbol;Acc:MGI:4439862]
73. Cyp26a1 ENSMUSG00000024987 68 0.749 - 0.749 - - - - cytochrome P450, family 26, subfamily a, polypeptide 1 [Source:MGI Symbol;Acc:MGI:1096359]
74. Slc25a22 ENSMUSG00000019082 749 0.749 - 0.749 - - - - solute carrier family 25 (mitochondrial carrier, glutamate), member 22 [Source:MGI Symbol;Acc:MGI:1915517]
75. Glb1l2 ENSMUSG00000036395 169 0.747 - 0.747 - - - - galactosidase, beta 1-like 2 [Source:MGI Symbol;Acc:MGI:2388283]
76. Sppl2b ENSMUSG00000035206 541 0.746 - - - - 0.746 - signal peptide peptidase like 2B [Source:MGI Symbol;Acc:MGI:1920468]
77. Gm20707 ENSMUSG00000093594 116 0.746 - 0.746 - - - - predicted gene 20707 [Source:MGI Symbol;Acc:MGI:5313154]
78. Fgd3 ENSMUSG00000037946 123 0.745 - 0.745 - - - - FYVE, RhoGEF and PH domain containing 3 [Source:MGI Symbol;Acc:MGI:1353657]
79. Chmp6 ENSMUSG00000025371 1369 0.745 - - - - 0.745 - charged multivesicular body protein 6 [Source:MGI Symbol;Acc:MGI:3583942]
80. Dyrk1b ENSMUSG00000002409 201 0.744 0.744 - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b [Source:MGI Symbol;Acc:MGI:1330302]
81. Cdca5 ENSMUSG00000024791 569 0.744 - 0.744 - - - - cell division cycle associated 5 [Source:MGI Symbol;Acc:MGI:1915099]
82. Gm22813 ENSMUSG00000105450, ENSMUSG00000105886 91 0.744 - 0.744 - - - - predicted gene, 22813 [Source:MGI Symbol;Acc:MGI:5452590]
83. Caprin2 ENSMUSG00000030309 884 0.742 - 0.742 - - - - caprin family member 2 [Source:MGI Symbol;Acc:MGI:2448541]
84. Jdp2 ENSMUSG00000034271 175 0.741 - - - - 0.741 - Jun dimerization protein 2 [Source:MGI Symbol;Acc:MGI:1932093]
85. Ephx1 ENSMUSG00000038776 79 0.741 0.741 - - - - - epoxide hydrolase 1, microsomal [Source:MGI Symbol;Acc:MGI:95405]
86. Mier2 ENSMUSG00000042570 1463 0.74 - 0.740 - - - - MIER family member 2 [Source:MGI Symbol;Acc:MGI:1917677]
87. Bmp1 ENSMUSG00000022098 699 0.739 0.739 - - - - - bone morphogenetic protein 1 [Source:MGI Symbol;Acc:MGI:88176]
88. Snora75 ENSMUSG00000064837 33 0.738 0.738 - - - - - small nucleolar RNA, H/ACA box 75 [Source:MGI Symbol;Acc:MGI:3819511]
89. Nsun7 ENSMUSG00000029206 288 0.738 - 0.738 - - - - NOL1/NOP2/Sun domain family, member 7 [Source:MGI Symbol;Acc:MGI:1918168]
90. Ginm1 ENSMUSG00000040006, ENSMUSG00000115999 540 0.737 - 0.737 - - - - glycoprotein integral membrane 1 [Source:MGI Symbol;Acc:MGI:2384905]
91. Fads6 ENSMUSG00000044788 88 0.736 - 0.736 - - - - fatty acid desaturase domain family, member 6 [Source:MGI Symbol;Acc:MGI:3039592]
92. Pptc7 ENSMUSG00000038582 156 0.735 - 0.735 - - - - PTC7 protein phosphatase homolog [Source:MGI Symbol;Acc:MGI:2444593]
93. Gm16973 ENSMUSG00000097743 731 0.734 - 0.734 - - - - predicted gene, 16973 [Source:MGI Symbol;Acc:MGI:4439897]
94. Cspg4 ENSMUSG00000032911 468 0.734 - 0.734 - - - - chondroitin sulfate proteoglycan 4 [Source:MGI Symbol;Acc:MGI:2153093]
95. Tmem170 ENSMUSG00000031953 67 0.733 0.733 - - - - - transmembrane protein 170 [Source:MGI Symbol;Acc:MGI:106426]
96. Map7 ENSMUSG00000019996 135 0.732 0.732 - - - - - microtubule-associated protein 7 [Source:MGI Symbol;Acc:MGI:1328328]
97. Carm1 ENSMUSG00000032185 70 0.732 - 0.732 - - - - coactivator-associated arginine methyltransferase 1 [Source:MGI Symbol;Acc:MGI:1913208]
98. Gm14295 ENSMUSG00000078877 50 0.731 - - - - 0.731 - predicted gene 14295 [Source:MGI Symbol;Acc:MGI:3709624]
99. Kif20b ENSMUSG00000024795 2808 0.731 - - - - - 0.731 kinesin family member 20B [Source:MGI Symbol;Acc:MGI:2444576]
100. Stk36 ENSMUSG00000033276 310 0.731 - 0.731 - - - - serine/threonine kinase 36 [Source:MGI Symbol;Acc:MGI:1920831]

There are 109 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA