Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Rfx3

Gene Name Gene ID Reads Annotation
Rfx3 ENSMUSG00000040929 1635 regulatory factor X, 3 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:106582]







Genes with expression patterns similar to Rfx3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Rfx3 ENSMUSG00000040929 1635 6 1.000 1.000 1.000 1.000 1.000 1.000 regulatory factor X, 3 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:106582]
2. Ndufb2 ENSMUSG00000002416 566 1.44 0.733 - 0.707 - - - NADH:ubiquinone oxidoreductase subunit B2 [Source:MGI Symbol;Acc:MGI:1915448]
3. Sf3b5 ENSMUSG00000078348 4648 0.848 0.848 - - - - - splicing factor 3b, subunit 5 [Source:MGI Symbol;Acc:MGI:1913375]
4. Fgfr1op ENSMUSG00000069135 1508 0.842 0.842 - - - - - Fgfr1 oncogene partner [Source:MGI Symbol;Acc:MGI:1922546]
5. Zc3hc1 ENSMUSG00000039130 2638 0.841 0.841 - - - - - zinc finger, C3HC type 1 [Source:MGI Symbol;Acc:MGI:1916023]
6. Lyrm2 ENSMUSG00000045854 1187 0.834 0.834 - - - - - LYR motif containing 2 [Source:MGI Symbol;Acc:MGI:1917573]
7. Maoa ENSMUSG00000025037 1731 0.823 0.823 - - - - - monoamine oxidase A [Source:MGI Symbol;Acc:MGI:96915]
8. Hnrnph2 ENSMUSG00000045427 6648 0.816 0.816 - - - - - heterogeneous nuclear ribonucleoprotein H2 [Source:MGI Symbol;Acc:MGI:1201779]
9. Prkcsh ENSMUSG00000003402 3565 0.803 0.803 - - - - - protein kinase C substrate 80K-H [Source:MGI Symbol;Acc:MGI:107877]
10. Srek1ip1 ENSMUSG00000021716 2652 0.803 0.803 - - - - - splicing regulatory glutamine/lysine-rich protein 1interacting protein 1 [Source:MGI Symbol;Acc:MGI:1914538]
11. Mob1a ENSMUSG00000043131 4032 0.802 0.802 - - - - - MOB kinase activator 1A [Source:MGI Symbol;Acc:MGI:2442631]
12. Tor2a ENSMUSG00000009563 950 0.802 0.802 - - - - - torsin family 2, member A [Source:MGI Symbol;Acc:MGI:1353596]
13. Epb4.1l3 Epb4.1l3 4534 0.801 0.801 - - - - -
14. Trip10 ENSMUSG00000019487 485 0.8 0.800 - - - - - thyroid hormone receptor interactor 10 [Source:MGI Symbol;Acc:MGI:2146901]
15. Trmt10b ENSMUSG00000035601 676 0.798 0.798 - - - - - tRNA methyltransferase 10B [Source:MGI Symbol;Acc:MGI:1917184]
16. Rps23-ps Rps23-ps 449 0.796 0.796 - - - - -
17. B3galtl B3galtl 1530 0.793 0.793 - - - - -
18. Mrps30 ENSMUSG00000021731 1840 0.79 0.790 - - - - - mitochondrial ribosomal protein S30 [Source:MGI Symbol;Acc:MGI:1926237]
19. Clec14a ENSMUSG00000045930 330 0.788 - - 0.788 - - - C-type lectin domain family 14, member a [Source:MGI Symbol;Acc:MGI:1914114]
20. Dlst ENSMUSG00000004789 1541 0.787 0.787 - - - - - dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) [Source:MGI Symbol;Acc:MGI:1926170]
21. Pigp ENSMUSG00000022940 3394 0.785 0.785 - - - - - phosphatidylinositol glycan anchor biosynthesis, class P [Source:MGI Symbol;Acc:MGI:1860433]
22. Ebpl ENSMUSG00000021928 826 0.783 0.783 - - - - - emopamil binding protein-like [Source:MGI Symbol;Acc:MGI:1915427]
23. Fkbp2 ENSMUSG00000056629 1183 0.781 0.781 - - - - - FK506 binding protein 2 [Source:MGI Symbol;Acc:MGI:95542]
24. Cnot10 ENSMUSG00000056167 1313 0.78 0.780 - - - - - CCR4-NOT transcription complex, subunit 10 [Source:MGI Symbol;Acc:MGI:1926143]
25. Naf1 ENSMUSG00000014907 1379 0.779 - - 0.779 - - - nuclear assembly factor 1 ribonucleoprotein [Source:MGI Symbol;Acc:MGI:2682306]
26. Dis3l ENSMUSG00000032396 662 0.779 0.779 - - - - - DIS3 like exosome 3'-5' exoribonuclease [Source:MGI Symbol;Acc:MGI:2143272]
27. Pten ENSMUSG00000013663 1937 0.778 0.778 - - - - - phosphatase and tensin homolog [Source:MGI Symbol;Acc:MGI:109583]
28. Nfil3 ENSMUSG00000056749 612 0.777 0.777 - - - - - nuclear factor, interleukin 3, regulated [Source:MGI Symbol;Acc:MGI:109495]
29. Znrf2 ENSMUSG00000058446 742 0.776 0.776 - - - - - zinc and ring finger 2 [Source:MGI Symbol;Acc:MGI:1196246]
30. Rptor ENSMUSG00000025583 783 0.775 0.775 - - - - - regulatory associated protein of MTOR, complex 1 [Source:MGI Symbol;Acc:MGI:1921620]
31. Vasn ENSMUSG00000039646 1210 0.773 0.773 - - - - - vasorin [Source:MGI Symbol;Acc:MGI:2177651]
32. Mcfd2 ENSMUSG00000024150 1376 0.773 0.773 - - - - - multiple coagulation factor deficiency 2 [Source:MGI Symbol;Acc:MGI:2183439]
33. Etfb ENSMUSG00000004610 1827 0.773 0.773 - - - - - electron transferring flavoprotein, beta polypeptide [Source:MGI Symbol;Acc:MGI:106098]
34. Acap2 ENSMUSG00000049076 1853 0.771 0.771 - - - - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:MGI Symbol;Acc:MGI:1925868]
35. Rp2h Rp2h 483 0.771 0.771 - - - - -
36. Fastkd3 ENSMUSG00000021532 1330 0.77 0.770 - - - - - FAST kinase domains 3 [Source:MGI Symbol;Acc:MGI:1916827]
37. Hs1bp3 ENSMUSG00000020605 1168 0.767 0.767 - - - - - HCLS1 binding protein 3 [Source:MGI Symbol;Acc:MGI:1913224]
38. Hsd17b12 ENSMUSG00000027195 1176 0.767 0.767 - - - - - hydroxysteroid (17-beta) dehydrogenase 12 [Source:MGI Symbol;Acc:MGI:1926967]
39. Ccdc47 ENSMUSG00000078622 3526 0.766 0.766 - - - - - coiled-coil domain containing 47 [Source:MGI Symbol;Acc:MGI:1914413]
40. Zfp236 ENSMUSG00000041258 968 0.766 0.766 - - - - - zinc finger protein 236 [Source:MGI Symbol;Acc:MGI:1926950]
41. Araf ENSMUSG00000001127 2162 0.765 0.765 - - - - - Araf proto-oncogene, serine/threonine kinase [Source:MGI Symbol;Acc:MGI:88065]
42. Msl3 ENSMUSG00000031358 644 0.764 0.764 - - - - - MSL complex subunit 3 [Source:MGI Symbol;Acc:MGI:1341851]
43. Sdccag8 ENSMUSG00000026504 196 0.764 0.764 - - - - - serologically defined colon cancer antigen 8 [Source:MGI Symbol;Acc:MGI:1924066]
44. Zfp521 ENSMUSG00000024420 1899 0.764 0.764 - - - - - zinc finger protein 521 [Source:MGI Symbol;Acc:MGI:95459]
45. Mrpl10 ENSMUSG00000001445 1186 0.763 0.763 - - - - - mitochondrial ribosomal protein L10 [Source:MGI Symbol;Acc:MGI:1333801]
46. Pfdn4 ENSMUSG00000052033 2812 0.763 - - 0.763 - - - prefoldin 4 [Source:MGI Symbol;Acc:MGI:1923512]
47. Hras ENSMUSG00000025499 4044 0.761 0.761 - - - - - Harvey rat sarcoma virus oncogene [Source:MGI Symbol;Acc:MGI:96224]
48. Armcx4 ENSMUSG00000049804 5793 0.761 - - 0.761 - - - armadillo repeat containing, X-linked 4 [Source:MGI Symbol;Acc:MGI:2147887]
49. Zfp810 ENSMUSG00000066829 697 0.76 0.760 - - - - - zinc finger protein 810 [Source:MGI Symbol;Acc:MGI:2384563]
50. Ccdc104 Ccdc104 1111 0.758 0.758 - - - - -
51. Helz ENSMUSG00000020721 3743 0.758 0.758 - - - - - helicase with zinc finger domain [Source:MGI Symbol;Acc:MGI:1925705]
52. St3gal3 ENSMUSG00000028538 520 0.757 0.757 - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 3 [Source:MGI Symbol;Acc:MGI:1316659]
53. Neo1 ENSMUSG00000032340 4225 0.757 0.757 - - - - - neogenin [Source:MGI Symbol;Acc:MGI:1097159]
54. Acp2 ENSMUSG00000002103 1293 0.757 0.757 - - - - - acid phosphatase 2, lysosomal [Source:MGI Symbol;Acc:MGI:87882]
55. Nr2f6 ENSMUSG00000002393 812 0.757 0.757 - - - - - nuclear receptor subfamily 2, group F, member 6 [Source:MGI Symbol;Acc:MGI:1352453]
56. Tspan5 ENSMUSG00000028152 1645 0.756 0.756 - - - - - tetraspanin 5 [Source:MGI Symbol;Acc:MGI:1928096]
57. Sfmbt1 ENSMUSG00000006527 1043 0.755 0.755 - - - - - Scm-like with four mbt domains 1 [Source:MGI Symbol;Acc:MGI:1859609]
58. Xrcc5 ENSMUSG00000026187 1592 0.755 0.755 - - - - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:MGI Symbol;Acc:MGI:104517]
59. Trim59 ENSMUSG00000034317 2969 0.755 0.755 - - - - - tripartite motif-containing 59 [Source:MGI Symbol;Acc:MGI:1914199]
60. Lamp3 ENSMUSG00000041247 195 0.754 0.754 - - - - - lysosomal-associated membrane protein 3 [Source:MGI Symbol;Acc:MGI:2441659]
61. Ppp1r26 ENSMUSG00000035829 1404 0.754 0.754 - - - - - protein phosphatase 1, regulatory subunit 26 [Source:MGI Symbol;Acc:MGI:2685193]
62. Emc8 ENSMUSG00000031819 1988 0.752 0.752 - - - - - ER membrane protein complex subunit 8 [Source:MGI Symbol;Acc:MGI:1343095]
63. Tmem68 ENSMUSG00000028232 669 0.752 0.752 - - - - - transmembrane protein 68 [Source:MGI Symbol;Acc:MGI:1919348]
64. Fnip1 ENSMUSG00000035992 1355 0.751 0.751 - - - - - folliculin interacting protein 1 [Source:MGI Symbol;Acc:MGI:2444668]
65. Cenpj ENSMUSG00000064128 642 0.751 - - 0.751 - - - centromere protein J [Source:MGI Symbol;Acc:MGI:2684927]
66. Zfp809 ENSMUSG00000057982 230 0.75 0.750 - - - - - zinc finger protein 809 [Source:MGI Symbol;Acc:MGI:2143362]
67. Ckap2 ENSMUSG00000037725 3722 0.75 0.750 - - - - - cytoskeleton associated protein 2 [Source:MGI Symbol;Acc:MGI:1931797]
68. Tecpr2 ENSMUSG00000021275 325 0.749 0.749 - - - - - tectonin beta-propeller repeat containing 2 [Source:MGI Symbol;Acc:MGI:2144865]
69. Celf4 ENSMUSG00000024268 1261 0.749 0.749 - - - - - CUGBP, Elav-like family member 4 [Source:MGI Symbol;Acc:MGI:1932407]
70. Pdgfc ENSMUSG00000028019 1297 0.749 0.749 - - - - - platelet-derived growth factor, C polypeptide [Source:MGI Symbol;Acc:MGI:1859631]
71. Loxl1 ENSMUSG00000032334 701 0.748 0.748 - - - - - lysyl oxidase-like 1 [Source:MGI Symbol;Acc:MGI:106096]
72. Kctd3 ENSMUSG00000026608 1856 0.748 0.748 - - - - - potassium channel tetramerisation domain containing 3 [Source:MGI Symbol;Acc:MGI:2444629]
73. Tada2a ENSMUSG00000018651 1094 0.747 0.747 - - - - - transcriptional adaptor 2A [Source:MGI Symbol;Acc:MGI:2144471]
74. Ackr3 ENSMUSG00000044337 800 0.747 - - 0.747 - - - atypical chemokine receptor 3 [Source:MGI Symbol;Acc:MGI:109562]
75. Usp33 ENSMUSG00000025437 1184 0.747 0.747 - - - - - ubiquitin specific peptidase 33 [Source:MGI Symbol;Acc:MGI:2159711]
76. 1700123O20Rik ENSMUSG00000040822 1367 0.746 0.746 - - - - - RIKEN cDNA 1700123O20 gene [Source:MGI Symbol;Acc:MGI:1920893]
77. 2210017G18Rik 2210017G18Rik 582 0.746 0.746 - - - - -
78. Cyb561d2 ENSMUSG00000037190 164 0.746 0.746 - - - - - cytochrome b-561 domain containing 2 [Source:MGI Symbol;Acc:MGI:1929280]
79. Med31 ENSMUSG00000020801 458 0.745 0.745 - - - - - mediator complex subunit 31 [Source:MGI Symbol;Acc:MGI:1914529]
80. Epdr1 ENSMUSG00000002808 561 0.745 0.745 - - - - - ependymin related protein 1 (zebrafish) [Source:MGI Symbol;Acc:MGI:2145369]
81. Polg2 ENSMUSG00000020718 273 0.744 - - - - - 0.744 polymerase (DNA directed), gamma 2, accessory subunit [Source:MGI Symbol;Acc:MGI:1354947]
82. Mrpl20 ENSMUSG00000029066 1337 0.744 0.744 - - - - - mitochondrial ribosomal protein L20 [Source:MGI Symbol;Acc:MGI:2137221]
83. Sec11a ENSMUSG00000025724 5429 0.744 0.744 - - - - - SEC11 homolog A, signal peptidase complex subunit [Source:MGI Symbol;Acc:MGI:1929464]
84. Arhgap11a ENSMUSG00000041219 1605 0.743 0.743 - - - - - Rho GTPase activating protein 11A [Source:MGI Symbol;Acc:MGI:2444300]
85. Cfp ENSMUSG00000001128 267 0.743 0.743 - - - - - complement factor properdin [Source:MGI Symbol;Acc:MGI:97545]
86. Pcmt1 ENSMUSG00000019795, ENSMUSG00000116405 2517 0.742 0.742 - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 [Source:MGI Symbol;Acc:MGI:97502]
87. Efemp1 ENSMUSG00000020467 735 0.742 0.742 - - - - - epidermal growth factor-containing fibulin-like extracellular matrix protein 1 [Source:MGI Symbol;Acc:MGI:1339998]
88. Ppp2r3c ENSMUSG00000021022 750 0.742 0.742 - - - - - protein phosphatase 2, regulatory subunit B'', gamma [Source:MGI Symbol;Acc:MGI:1930009]
89. Nfam1 ENSMUSG00000058099 140 0.741 - - - - - 0.741 Nfat activating molecule with ITAM motif 1 [Source:MGI Symbol;Acc:MGI:1921289]
90. Cyr61 ENSMUSG00000028195 563 0.741 0.741 - - - - - cysteine rich protein 61 [Source:MGI Symbol;Acc:MGI:88613]
91. Fkbp5 ENSMUSG00000024222 1005 0.741 0.741 - - - - - FK506 binding protein 5 [Source:MGI Symbol;Acc:MGI:104670]
92. Trp53inp2 ENSMUSG00000038375 1466 0.741 0.741 - - - - - transformation related protein 53 inducible nuclear protein 2 [Source:MGI Symbol;Acc:MGI:1915978]
93. Plcxd3 ENSMUSG00000049148 107 0.74 0.740 - - - - - phosphatidylinositol-specific phospholipase C, X domain containing 3 [Source:MGI Symbol;Acc:MGI:2442605]
94. Lmbr1 ENSMUSG00000010721 572 0.74 0.740 - - - - - limb region 1 [Source:MGI Symbol;Acc:MGI:1861746]
95. Nbeal1 ENSMUSG00000073664 749 0.74 0.740 - - - - - neurobeachin like 1 [Source:MGI Symbol;Acc:MGI:2444343]
96. Sfxn4 ENSMUSG00000063698 313 0.74 0.740 - - - - - sideroflexin 4 [Source:MGI Symbol;Acc:MGI:2137680]
97. 3110082I17Rik ENSMUSG00000053553 775 0.74 0.740 - - - - - RIKEN cDNA 3110082I17 gene [Source:MGI Symbol;Acc:MGI:1920462]
98. 2810006K23Rik ENSMUSG00000047635 1607 0.739 0.739 - - - - - RIKEN cDNA 2810006K23 gene [Source:MGI Symbol;Acc:MGI:1919900]
99. Cmklr1 ENSMUSG00000042190 154 0.739 - - - - - 0.739 chemokine-like receptor 1 [Source:MGI Symbol;Acc:MGI:109603]
100. Fbxo46 ENSMUSG00000050428 225 0.739 0.739 - - - - - F-box protein 46 [Source:MGI Symbol;Acc:MGI:2444918]

There are 141 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA