Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Prpf40b

Gene Name Gene ID Reads Annotation
Prpf40b ENSMUSG00000023007 1271 pre-mRNA processing factor 40B [Source:MGI Symbol;Acc:MGI:1925583]







Genes with expression patterns similar to Prpf40b

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Prpf40b ENSMUSG00000023007 1271 6 1.000 1.000 1.000 1.000 1.000 1.000 pre-mRNA processing factor 40B [Source:MGI Symbol;Acc:MGI:1925583]
2. Gin1 ENSMUSG00000026333 428 0.832 - - - - - 0.832 gypsy retrotransposon integrase 1 [Source:MGI Symbol;Acc:MGI:2182036]
3. A330023F24Rik ENSMUSG00000096929 33 0.807 - - - - - 0.807 RIKEN cDNA A330023F24 gene [Source:MGI Symbol;Acc:MGI:2443958]
4. Fam101b 1093 0.802 - - - - - 0.802 family with sequence similarity 101, member B
5. Trmt13 ENSMUSG00000033439 240 0.797 - - - - - 0.797 tRNA methyltransferase 13 [Source:MGI Symbol;Acc:MGI:1925219]
6. Bcap29 ENSMUSG00000020650 559 0.785 - - - - - 0.785 B cell receptor associated protein 29 [Source:MGI Symbol;Acc:MGI:101917]
7. Zscan12 ENSMUSG00000036721 678 0.78 - - - - - 0.780 zinc finger and SCAN domain containing 12 [Source:MGI Symbol;Acc:MGI:1099444]
8. Gm26822 ENSMUSG00000096921 421 0.775 - - - - - 0.775 predicted gene, 26822 [Source:MGI Symbol;Acc:MGI:5477316]
9. Tmem11 ENSMUSG00000043284 789 0.772 - - - - - 0.772 transmembrane protein 11 [Source:MGI Symbol;Acc:MGI:2144726]
10. B630019K06Rik ENSMUSG00000052364 523 0.766 - - - - - 0.766 RIKEN cDNA B630019K06 gene [Source:MGI Symbol;Acc:MGI:2147918]
11. Gm16195 ENSMUSG00000087308 86 0.766 - - - - - 0.766 predicted gene 16195 [Source:MGI Symbol;Acc:MGI:3801774]
12. Gemin6 ENSMUSG00000055760 841 0.76 - - - - - 0.760 gem nuclear organelle associated protein 6 [Source:MGI Symbol;Acc:MGI:1914492]
13. Scaf1 ENSMUSG00000038406 346 0.757 - - - - - 0.757 SR-related CTD-associated factor 1 [Source:MGI Symbol;Acc:MGI:2141980]
14. Surf1 ENSMUSG00000015790 287 0.754 - - - - - 0.754 surfeit gene 1 [Source:MGI Symbol;Acc:MGI:98443]
15. Hist1h1e ENSMUSG00000051627 604 0.752 - - - - - 0.752 histone cluster 1, H1e [Source:MGI Symbol;Acc:MGI:1931527]
16. Mamld1 ENSMUSG00000059401 44 0.748 - - - - - 0.748 mastermind-like domain containing 1 [Source:MGI Symbol;Acc:MGI:3045303]
17. Sec61g ENSMUSG00000078974 132 0.747 - - - - - 0.747 SEC61, gamma subunit [Source:MGI Symbol;Acc:MGI:1202066]
18. Brd9 ENSMUSG00000057649 1862 0.747 - 0.747 - - - - bromodomain containing 9 [Source:MGI Symbol;Acc:MGI:2145317]
19. Kif20b ENSMUSG00000024795 2808 0.745 - - - - - 0.745 kinesin family member 20B [Source:MGI Symbol;Acc:MGI:2444576]
20. Acaa1a ENSMUSG00000036138 561 0.741 - - - - - 0.741 acetyl-Coenzyme A acyltransferase 1A [Source:MGI Symbol;Acc:MGI:2148491]
21. Slc45a4 ENSMUSG00000079020 632 0.74 - - - - - 0.740 solute carrier family 45, member 4 [Source:MGI Symbol;Acc:MGI:2146236]
22. Hacl1 ENSMUSG00000021884 169 0.736 - - - - - 0.736 2-hydroxyacyl-CoA lyase 1 [Source:MGI Symbol;Acc:MGI:1929657]
23. Shisa5 ENSMUSG00000025647 1562 0.736 - - - - - 0.736 shisa family member 5 [Source:MGI Symbol;Acc:MGI:1915044]
24. Aldh16a1 ENSMUSG00000007833 444 0.736 - - - - - 0.736 aldehyde dehydrogenase 16 family, member A1 [Source:MGI Symbol;Acc:MGI:1916998]
25. Gm12577 ENSMUSG00000083834 78 0.736 - - - - - 0.736 predicted gene 12577 [Source:MGI Symbol;Acc:MGI:3651713]
26. Ptprm ENSMUSG00000033278 279 0.736 - - - - - 0.736 protein tyrosine phosphatase, receptor type, M [Source:MGI Symbol;Acc:MGI:102694]
27. Smarca5-ps ENSMUSG00000052912 83 0.736 - - - - - 0.736 SWI/SNF related, matrix associated, actin depenent ragulator of chromatin, subfamily a, member 5, pseudogene [Source:MGI Symbol;Acc:MGI:2443330]
28. Ptpro ENSMUSG00000030223 65 0.735 - - - - - 0.735 protein tyrosine phosphatase, receptor type, O [Source:MGI Symbol;Acc:MGI:1097152]
29. Gm15688 ENSMUSG00000089737 18 0.734 - - - - - 0.734 predicted gene 15688 [Source:MGI Symbol;Acc:MGI:3647549]
30. 6530403H02Rik ENSMUSG00000098097 13 0.734 - - - - - 0.734 RIKEN cDNA 6530403H02 gene [Source:MGI Symbol;Acc:MGI:2444638]
31. Gm11975 ENSMUSG00000084231 70 0.734 - - - - - 0.734 predicted gene 11975 [Source:MGI Symbol;Acc:MGI:3650057]
32. Gm13815 ENSMUSG00000080860 47 0.733 - - - - - 0.733 predicted gene 13815 [Source:MGI Symbol;Acc:MGI:3649318]
33. Pias3 ENSMUSG00000028101 1756 0.733 - - - - - 0.733 protein inhibitor of activated STAT 3 [Source:MGI Symbol;Acc:MGI:1913126]
34. Ptgir ENSMUSG00000043017 22 0.732 - - - - - 0.732 prostaglandin I receptor (IP) [Source:MGI Symbol;Acc:MGI:99535]
35. Cdc6 ENSMUSG00000017499 1721 0.732 - - - - - 0.732 cell division cycle 6 [Source:MGI Symbol;Acc:MGI:1345150]
36. Gm5258 ENSMUSG00000091806 123 0.732 - - - - - 0.732 predicted gene 5258 [Source:MGI Symbol;Acc:MGI:3647794]
37. Gm13423 ENSMUSG00000081648 80 0.731 - - - - - 0.731 predicted gene 13423 [Source:MGI Symbol;Acc:MGI:3650165]
38. Gm6625 ENSMUSG00000094790 615 0.731 - - - - - 0.731 predicted gene 6625 [Source:MGI Symbol;Acc:MGI:3647663]
39. Gm26205 ENSMUSG00000064841 78 0.731 - - - - - 0.731 predicted gene, 26205 [Source:MGI Symbol;Acc:MGI:5455982]
40. Orc1 ENSMUSG00000028587 332 0.729 - - - - - 0.729 origin recognition complex, subunit 1 [Source:MGI Symbol;Acc:MGI:1328337]
41. Kcnc2 ENSMUSG00000035681 30 0.729 - - - - - 0.729 potassium voltage gated channel, Shaw-related subfamily, member 2 [Source:MGI Symbol;Acc:MGI:96668]
42. Sdpr 506 0.729 - - - - - 0.729 serum deprivation response
43. AU023871 AU023871 49 0.728 - - - - - 0.728
44. Rps15-ps2 ENSMUSG00000071419 155 0.728 - - - - - 0.728 ribosomal protein S15, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3647234]
45. Gm13186 ENSMUSG00000081278 857 0.726 - - - - - 0.726 predicted gene 13186 [Source:MGI Symbol;Acc:MGI:3649441]
46. Slc35d3 ENSMUSG00000050473 84 0.72 - - - - - 0.720 solute carrier family 35, member D3 [Source:MGI Symbol;Acc:MGI:1923407]
47. Fbxo27 ENSMUSG00000037463 111 0.718 - - - - - 0.718 F-box protein 27 [Source:MGI Symbol;Acc:MGI:2685007]
48. 1700021K19Rik 1700021K19Rik 830 0.718 - - 0.718 - - -
49. Herc3 ENSMUSG00000029804 205 0.718 - - - - - 0.718 hect domain and RLD 3 [Source:MGI Symbol;Acc:MGI:1921248]
50. Ubxn2a ENSMUSG00000020634 544 0.716 - - - - - 0.716 UBX domain protein 2A [Source:MGI Symbol;Acc:MGI:2442310]
51. Sdhd ENSMUSG00000000171 609 0.715 - - - - - 0.715 succinate dehydrogenase complex, subunit D, integral membrane protein [Source:MGI Symbol;Acc:MGI:1914175]
52. Rasef ENSMUSG00000043003 55 0.715 - - - - - 0.715 RAS and EF hand domain containing [Source:MGI Symbol;Acc:MGI:2448565]
53. Bphl ENSMUSG00000038286 501 0.715 - - - - - 0.715 biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen) [Source:MGI Symbol;Acc:MGI:1915271]
54. Parp8 ENSMUSG00000021725 131 0.714 - - - - - 0.714 poly (ADP-ribose) polymerase family, member 8 [Source:MGI Symbol;Acc:MGI:1098713]
55. Gm11033 ENSMUSG00000079011 144 0.714 - - - - - 0.714 predicted gene 11033 [Source:MGI Symbol;Acc:MGI:3779256]
56. Gpi1 ENSMUSG00000036427 9343 0.713 - 0.713 - - - - glucose phosphate isomerase 1 [Source:MGI Symbol;Acc:MGI:95797]
57. Zcchc2 ENSMUSG00000038866 450 0.713 - - - - - 0.713 zinc finger, CCHC domain containing 2 [Source:MGI Symbol;Acc:MGI:2444114]
58. Mier3 ENSMUSG00000032727 1789 0.713 - - - - - 0.713 MIER family member 3 [Source:MGI Symbol;Acc:MGI:2442317]
59. Dock5 ENSMUSG00000044447 284 0.712 - - - - - 0.712 dedicator of cytokinesis 5 [Source:MGI Symbol;Acc:MGI:2652871]
60. Cyyr1 ENSMUSG00000041134 278 0.711 - - - - - 0.711 cysteine and tyrosine-rich protein 1 [Source:MGI Symbol;Acc:MGI:2152187]
61. Depdc1b ENSMUSG00000021697 283 0.711 - - - - - 0.711 DEP domain containing 1B [Source:MGI Symbol;Acc:MGI:2145425]
62. Ush1c ENSMUSG00000030838 191 0.71 - - - - - 0.710 USH1 protein network component harmonin [Source:MGI Symbol;Acc:MGI:1919338]
63. Tenm2 ENSMUSG00000049336 166 0.709 - - - - - 0.709 teneurin transmembrane protein 2 [Source:MGI Symbol;Acc:MGI:1345184]
64. C730034F03Rik ENSMUSG00000079242 111 0.709 - - - - - 0.709 RIKEN cDNA C730034F03 gene [Source:MGI Symbol;Acc:MGI:2441921]
65. Gm11739 ENSMUSG00000086826 102 0.709 - - - - - 0.709 predicted gene 11739 [Source:MGI Symbol;Acc:MGI:3650571]
66. Sumo1 ENSMUSG00000026021 5835 0.708 - - - - - 0.708 small ubiquitin-like modifier 1 [Source:MGI Symbol;Acc:MGI:1197010]
67. Ust ENSMUSG00000047712 319 0.708 - - - - - 0.708 uronyl-2-sulfotransferase [Source:MGI Symbol;Acc:MGI:2442406]
68. Ctns ENSMUSG00000005949 964 0.708 - - - - - 0.708 cystinosis, nephropathic [Source:MGI Symbol;Acc:MGI:1932872]
69. Dnase2a ENSMUSG00000003812 117 0.708 - - - - - 0.708 deoxyribonuclease II alpha [Source:MGI Symbol;Acc:MGI:1329019]
70. Etfdh ENSMUSG00000027809 498 0.707 - - - - - 0.707 electron transferring flavoprotein, dehydrogenase [Source:MGI Symbol;Acc:MGI:106100]
71. Srpx2 ENSMUSG00000031253 68 0.707 - - - - - 0.707 sushi-repeat-containing protein, X-linked 2 [Source:MGI Symbol;Acc:MGI:1916042]
72. Kcnq3 ENSMUSG00000056258 146 0.707 - - - - - 0.707 potassium voltage-gated channel, subfamily Q, member 3 [Source:MGI Symbol;Acc:MGI:1336181]
73. Tsen54 ENSMUSG00000020781 106 0.706 - - - - - 0.706 tRNA splicing endonuclease subunit 54 [Source:MGI Symbol;Acc:MGI:1923515]
74. Cpne2 ENSMUSG00000034361 315 0.705 - - - - - 0.705 copine II [Source:MGI Symbol;Acc:MGI:2387578]
75. Rhno1 ENSMUSG00000048668 97 0.705 - - - - - 0.705 RAD9-HUS1-RAD1 interacting nuclear orphan 1 [Source:MGI Symbol;Acc:MGI:1915315]
76. Ggct ENSMUSG00000002797 199 0.704 - - - - - 0.704 gamma-glutamyl cyclotransferase [Source:MGI Symbol;Acc:MGI:95700]
77. Dusp10 ENSMUSG00000039384 256 0.704 - - - - - 0.704 dual specificity phosphatase 10 [Source:MGI Symbol;Acc:MGI:1927070]
78. Nat14 ENSMUSG00000035285 53 0.703 - - - - - 0.703 N-acetyltransferase 14 [Source:MGI Symbol;Acc:MGI:3039561]
79. Cd34 ENSMUSG00000016494 921 0.702 - - - - - 0.702 CD34 antigen [Source:MGI Symbol;Acc:MGI:88329]
80. Siglec1 ENSMUSG00000027322 95 0.702 - - - - - 0.702 sialic acid binding Ig-like lectin 1, sialoadhesin [Source:MGI Symbol;Acc:MGI:99668]
81. Begain ENSMUSG00000040867 270 0.701 - - - - - 0.701 brain-enriched guanylate kinase-associated [Source:MGI Symbol;Acc:MGI:3044626]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA