Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Prdm13

Gene Name Gene ID Reads Annotation
Prdm13 ENSMUSG00000040478 193 PR domain containing 13 [Source:MGI Symbol;Acc:MGI:2448528]







Genes with expression patterns similar to Prdm13

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Prdm13 ENSMUSG00000040478 193 6 1.000 1.000 1.000 1.000 1.000 1.000 PR domain containing 13 [Source:MGI Symbol;Acc:MGI:2448528]
2. Gbx2 ENSMUSG00000034486 478 3.373 0.755 - 0.858 0.877 - 0.883 gastrulation brain homeobox 2 [Source:MGI Symbol;Acc:MGI:95668]
3. Sox2 ENSMUSG00000074637 8409 2.988 0.732 - - 0.758 0.760 0.738 SRY (sex determining region Y)-box 2 [Source:MGI Symbol;Acc:MGI:98364]
4. Gsx1 ENSMUSG00000053129 137 2.6 - - 0.951 0.871 - 0.778 GS homeobox 1 [Source:MGI Symbol;Acc:MGI:95842]
5. Sox3 ENSMUSG00000045179 1137 2.358 - - - 0.799 0.747 0.812 SRY (sex determining region Y)-box 3 [Source:MGI Symbol;Acc:MGI:98365]
6. Lect1 122 2.354 - - 0.885 0.768 - 0.701 leukocyte cell derived chemotaxin 1, transcript variant X3
7. Sox1 ENSMUSG00000096014 349 2.323 - 0.764 - 0.740 - 0.819 SRY (sex determining region Y)-box 1 [Source:MGI Symbol;Acc:MGI:98357]
8. Fabp7 ENSMUSG00000019874 3183 2.323 0.740 - - 0.777 - 0.806 fatty acid binding protein 7, brain [Source:MGI Symbol;Acc:MGI:101916]
9. Phyhipl ENSMUSG00000037747 636 2.322 - - 0.764 0.785 0.773 - phytanoyl-CoA hydroxylase interacting protein-like [Source:MGI Symbol;Acc:MGI:1918161]
10. Scube2 ENSMUSG00000007279 406 2.239 - 0.715 0.778 0.746 - - signal peptide, CUB domain, EGF-like 2 [Source:MGI Symbol;Acc:MGI:1928765]
11. Lbx1 ENSMUSG00000025216 160 1.665 - - 0.932 0.733 - - ladybird homeobox 1 [Source:MGI Symbol;Acc:MGI:104867]
12. Otp ENSMUSG00000021685 170 1.659 - - - 0.799 - 0.860 orthopedia homeobox [Source:MGI Symbol;Acc:MGI:99835]
13. Msx3 ENSMUSG00000025469 236 1.597 0.825 - - - 0.772 - msh homeobox 3 [Source:MGI Symbol;Acc:MGI:106587]
14. Slain1 ENSMUSG00000055717 237 1.59 - - 0.747 - 0.843 - SLAIN motif family, member 1 [Source:MGI Symbol;Acc:MGI:2145578]
15. Robo3 ENSMUSG00000032128 389 1.588 - - - 0.765 - 0.823 roundabout guidance receptor 3 [Source:MGI Symbol;Acc:MGI:1343102]
16. Pax3 ENSMUSG00000004872 3095 1.565 - - 0.780 0.785 - - paired box 3 [Source:MGI Symbol;Acc:MGI:97487]
17. Wscd1 ENSMUSG00000020811 318 1.528 0.800 - - - 0.728 - WSC domain containing 1 [Source:MGI Symbol;Acc:MGI:2448493]
18. Dcc ENSMUSG00000060534 107 1.52 - - 0.757 - 0.763 - deleted in colorectal carcinoma [Source:MGI Symbol;Acc:MGI:94869]
19. Nppc ENSMUSG00000026241 26 1.505 0.768 - - - 0.737 - natriuretic peptide type C [Source:MGI Symbol;Acc:MGI:97369]
20. Zic4 ENSMUSG00000036972 1968 1.479 - - - 0.723 0.756 - zinc finger protein of the cerebellum 4 [Source:MGI Symbol;Acc:MGI:107201]
21. Rfx4 ENSMUSG00000020037 455 1.467 0.766 - 0.701 - - - regulatory factor X, 4 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:1918387]
22. Ildr2 ENSMUSG00000040612 1142 1.447 - - - 0.733 0.714 - immunoglobulin-like domain containing receptor 2 [Source:MGI Symbol;Acc:MGI:1196370]
23. Zic1 ENSMUSG00000032368 7734 1.443 - - - 0.724 - 0.719 zinc finger protein of the cerebellum 1 [Source:MGI Symbol;Acc:MGI:106683]
24. Ptf1a ENSMUSG00000026735 35 0.871 - - - - - 0.871 pancreas specific transcription factor, 1a [Source:MGI Symbol;Acc:MGI:1328312]
25. B130011K05Rik ENSMUSG00000085113 12 0.869 - 0.869 - - - - RIKEN cDNA B130011K05 gene [Source:MGI Symbol;Acc:MGI:2443995]
26. Irx2 ENSMUSG00000001504 819 0.854 0.854 - - - - - Iroquois homeobox 2 [Source:MGI Symbol;Acc:MGI:1197526]
27. Lhx5 ENSMUSG00000029595 102 0.853 0.853 - - - - - LIM homeobox protein 5 [Source:MGI Symbol;Acc:MGI:107792]
28. Dgkg ENSMUSG00000022861 38 0.848 - 0.848 - - - - diacylglycerol kinase, gamma [Source:MGI Symbol;Acc:MGI:105060]
29. Sp5 ENSMUSG00000075304 106 0.834 0.834 - - - - - trans-acting transcription factor 5 [Source:MGI Symbol;Acc:MGI:1927715]
30. Mmp8 ENSMUSG00000005800 22 0.826 - 0.826 - - - - matrix metallopeptidase 8 [Source:MGI Symbol;Acc:MGI:1202395]
31. Gm26730 ENSMUSG00000097117 6 0.826 - 0.826 - - - - predicted gene, 26730 [Source:MGI Symbol;Acc:MGI:5477224]
32. Gm94 ENSMUSG00000071858 1 0.826 - 0.826 - - - - predicted gene 94 [Source:MGI Symbol;Acc:MGI:2684940]
33. Ccdc38 ENSMUSG00000036168 3 0.826 - 0.826 - - - - coiled-coil domain containing 38 [Source:MGI Symbol;Acc:MGI:2444738]
34. A730090N16Rik ENSMUSG00000090120 19 0.826 - 0.826 - - - - RIKEN cDNA A730090N16 gene [Source:MGI Symbol;Acc:MGI:2442748]
35. D630036G22Rik D630036G22Rik 18 0.826 - 0.826 - - - -
36. Gm3571 ENSMUSG00000090610 11 0.826 - 0.826 - - - - predicted gene 3571 [Source:MGI Symbol;Acc:MGI:3781748]
37. Gm11424 ENSMUSG00000082726 2 0.826 - 0.826 - - - - predicted gene 11424 [Source:MGI Symbol;Acc:MGI:3651336]
38. Gm9097 ENSMUSG00000081230 1 0.826 - 0.826 - - - - predicted gene 9097 [Source:MGI Symbol;Acc:MGI:3648601]
39. Hspa1l ENSMUSG00000007033 4 0.826 - 0.826 - - - - heat shock protein 1-like [Source:MGI Symbol;Acc:MGI:96231]
40. Gm13864 ENSMUSG00000082920 13 0.826 - 0.826 - - - - predicted gene 13864 [Source:MGI Symbol;Acc:MGI:3651491]
41. Gm4353 ENSMUSG00000091900 44 0.826 - 0.826 - - - - predicted gene 4353 [Source:MGI Symbol;Acc:MGI:3782538]
42. Hoxd1 ENSMUSG00000042448 332 0.826 - - - 0.826 - - homeobox D1 [Source:MGI Symbol;Acc:MGI:96201]
43. Mmel1 ENSMUSG00000058183 3 0.826 - 0.826 - - - - membrane metallo-endopeptidase-like 1 [Source:MGI Symbol;Acc:MGI:1351603]
44. A930039A15Rik A930039A15Rik 1 0.826 - 0.826 - - - -
45. Gm6345 ENSMUSG00000096964 7 0.826 - 0.826 - - - - predicted gene 6345 [Source:MGI Symbol;Acc:MGI:3647370]
46. H2-Q5 ENSMUSG00000055413 11 0.826 - 0.826 - - - - histocompatibility 2, Q region locus 5 [Source:MGI Symbol;Acc:MGI:95934]
47. Sgcz ENSMUSG00000039539 10 0.826 - 0.826 - - - - sarcoglycan zeta [Source:MGI Symbol;Acc:MGI:2388820]
48. Pax7 ENSMUSG00000028736 356 0.824 - - 0.824 - - - paired box 7 [Source:MGI Symbol;Acc:MGI:97491]
49. Slc1a1 ENSMUSG00000024935 7 0.817 - - 0.817 - - - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:MGI Symbol;Acc:MGI:105083]
50. Gm16675 ENSMUSG00000097534 4 0.815 - - 0.815 - - - predicted gene, 16675 [Source:MGI Symbol;Acc:MGI:4439599]
51. Barhl2 ENSMUSG00000034384 99 0.815 - - 0.815 - - - BarH like homeobox 2 [Source:MGI Symbol;Acc:MGI:1859314]
52. Lce1h ENSMUSG00000049593 2 0.815 - - 0.815 - - - late cornified envelope 1H [Source:MGI Symbol;Acc:MGI:1914968]
53. A530072M11Rik ENSMUSG00000085112 8 0.815 - - 0.815 - - - RIKEN cDNA gene A530072M11 [Source:MGI Symbol;Acc:MGI:4440477]
54. Gm17210 ENSMUSG00000090459 18 0.815 - - 0.815 - - - predicted gene 17210 [Source:MGI Symbol;Acc:MGI:4938037]
55. F2rl2 ENSMUSG00000021675 41 0.815 - - 0.815 - - - coagulation factor II (thrombin) receptor-like 2 [Source:MGI Symbol;Acc:MGI:1298208]
56. Ccl6 ENSMUSG00000018927 44 0.802 - 0.802 - - - - chemokine (C-C motif) ligand 6 [Source:MGI Symbol;Acc:MGI:98263]
57. Sema5b ENSMUSG00000052133 891 0.801 0.801 - - - - - sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B [Source:MGI Symbol;Acc:MGI:107555]
58. Zic3 ENSMUSG00000067860 549 0.8 - - - 0.800 - - zinc finger protein of the cerebellum 3 [Source:MGI Symbol;Acc:MGI:106676]
59. Trim30a ENSMUSG00000030921 72 0.798 - 0.798 - - - - tripartite motif-containing 30A [Source:MGI Symbol;Acc:MGI:98178]
60. Pcdh8 ENSMUSG00000036422 452 0.794 0.794 - - - - - protocadherin 8 [Source:MGI Symbol;Acc:MGI:1306800]
61. Lrrc39 ENSMUSG00000027961 7 0.79 - 0.790 - - - - leucine rich repeat containing 39 [Source:MGI Symbol;Acc:MGI:1924557]
62. Rmst ENSMUSG00000112117 594 0.786 0.786 - - - - - rhabdomyosarcoma 2 associated transcript (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1099806]
63. 4921528I07Rik ENSMUSG00000064299 2 0.782 - 0.782 - - - - RIKEN cDNA 4921528I07 gene [Source:MGI Symbol;Acc:MGI:1924299]
64. Kirrel2 ENSMUSG00000036915 42 0.782 - - - - - 0.782 kirre like nephrin family adhesion molecule 2 [Source:MGI Symbol;Acc:MGI:2442334]
65. Hes3 ENSMUSG00000028946 73 0.782 - 0.782 - - - - hes family bHLH transcription factor 3 [Source:MGI Symbol;Acc:MGI:104877]
66. Dppa5a ENSMUSG00000060461 67 0.782 - 0.782 - - - - developmental pluripotency associated 5A [Source:MGI Symbol;Acc:MGI:101800]
67. Gm11953 ENSMUSG00000082816 13 0.782 - 0.782 - - - - predicted gene 11953 [Source:MGI Symbol;Acc:MGI:3649564]
68. Pou3f1 ENSMUSG00000090125 496 0.78 0.780 - - - - - POU domain, class 3, transcription factor 1 [Source:MGI Symbol;Acc:MGI:101896]
69. Emid1 ENSMUSG00000034164 456 0.779 0.779 - - - - - EMI domain containing 1 [Source:MGI Symbol;Acc:MGI:2155091]
70. Cntn3 ENSMUSG00000030075 24 0.776 - 0.776 - - - - contactin 3 [Source:MGI Symbol;Acc:MGI:99534]
71. Skor1 ENSMUSG00000022245 61 0.773 - - 0.773 - - - SKI family transcriptional corepressor 1 [Source:MGI Symbol;Acc:MGI:2443473]
72. Pou3f3 ENSMUSG00000045515 5137 0.772 - - - 0.772 - - POU domain, class 3, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102564]
73. Fam181a ENSMUSG00000096753 73 0.768 - - 0.768 - - - family with sequence similarity 181, member A [Source:MGI Symbol;Acc:MGI:3647570]
74. C130071C03Rik ENSMUSG00000050334 1582 0.767 0.767 - - - - - RIKEN cDNA C130071C03 gene [Source:MGI Symbol;Acc:MGI:2443574]
75. mmu-mir-6943 mmu-mir-6943 2 0.767 - 0.767 - - - -
76. Cldn14 ENSMUSG00000047109 8 0.766 - - - - - 0.766 claudin 14 [Source:MGI Symbol;Acc:MGI:1860425]
77. Oasl1 ENSMUSG00000041827 13 0.763 - 0.763 - - - - 2'-5' oligoadenylate synthetase-like 1 [Source:MGI Symbol;Acc:MGI:2180849]
78. Nedd9 ENSMUSG00000021365 1501 0.753 0.753 - - - - - neural precursor cell expressed, developmentally down-regulated gene 9 [Source:MGI Symbol;Acc:MGI:97302]
79. Sphk1 ENSMUSG00000061878 72 0.751 - - 0.751 - - - sphingosine kinase 1 [Source:MGI Symbol;Acc:MGI:1316649]
80. Gm12253 ENSMUSG00000058287 6 0.751 - - - - - 0.751 predicted gene 12253 [Source:MGI Symbol;Acc:MGI:3651568]
81. Sox21 ENSMUSG00000061517 464 0.749 - - - 0.749 - - SRY (sex determining region Y)-box 21 [Source:MGI Symbol;Acc:MGI:2654070]
82. Hgd ENSMUSG00000022821 4 0.749 - 0.749 - - - - homogentisate 1, 2-dioxygenase [Source:MGI Symbol;Acc:MGI:96078]
83. Zic2 ENSMUSG00000061524 472 0.746 0.746 - - - - - zinc finger protein of the cerebellum 2 [Source:MGI Symbol;Acc:MGI:106679]
84. Dll1 ENSMUSG00000014773 633 0.746 - - - - 0.746 - delta like canonical Notch ligand 1 [Source:MGI Symbol;Acc:MGI:104659]
85. H2-K1 ENSMUSG00000061232 613 0.745 0.745 - - - - - histocompatibility 2, K1, K region [Source:MGI Symbol;Acc:MGI:95904]
86. 2610034M16Rik 2610034M16Rik 71 0.74 - - 0.740 - - -
87. Celsr1 ENSMUSG00000016028 500 0.737 0.737 - - - - - cadherin, EGF LAG seven-pass G-type receptor 1 [Source:MGI Symbol;Acc:MGI:1100883]
88. Stk33 ENSMUSG00000031027 43 0.735 - - 0.735 - - - serine/threonine kinase 33 [Source:MGI Symbol;Acc:MGI:2152419]
89. Hap1 ENSMUSG00000006930 613 0.734 0.734 - - - - - huntingtin-associated protein 1 [Source:MGI Symbol;Acc:MGI:1261831]
90. Hoxb2 ENSMUSG00000075588 9 0.734 0.734 - - - - - homeobox B2 [Source:MGI Symbol;Acc:MGI:96183]
91. Fgf15 ENSMUSG00000031073 527 0.732 0.732 - - - - - fibroblast growth factor 15 [Source:MGI Symbol;Acc:MGI:1096383]
92. Adrb3 ENSMUSG00000031489 85 0.731 - 0.731 - - - - adrenergic receptor, beta 3 [Source:MGI Symbol;Acc:MGI:87939]
93. Gcnt4 ENSMUSG00000091387 60 0.73 - - 0.730 - - - glucosaminyl (N-acetyl) transferase 4, core 2 (beta-1,6-N-acetylglucosaminyltransferase) [Source:MGI Symbol;Acc:MGI:2684919]
94. 2700081L22Rik 2700081L22Rik 44 0.73 - 0.730 - - - -
95. 0610040B09Rik 0610040B09Rik 333 0.729 - - 0.729 - - -
96. Prr15 ENSMUSG00000045725 35 0.729 - - 0.729 - - - proline rich 15 [Source:MGI Symbol;Acc:MGI:1925254]
97. Gnb5 ENSMUSG00000032192 6 0.726 - - - - 0.726 - guanine nucleotide binding protein (G protein), beta 5 [Source:MGI Symbol;Acc:MGI:101848]
98. Gm14562 ENSMUSG00000085073 2 0.725 - - 0.725 - - - predicted gene 14562 [Source:MGI Symbol;Acc:MGI:3641982]
99. A730017C20Rik ENSMUSG00000050875 517 0.723 - 0.723 - - - - RIKEN cDNA A730017C20 gene [Source:MGI Symbol;Acc:MGI:2442934]
100. Gm11470 ENSMUSG00000082665 8 0.723 - 0.723 - - - - predicted gene 11470 [Source:MGI Symbol;Acc:MGI:3649221]

There are 18 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA