Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Pcif1

Gene Name Gene ID Reads Annotation
Pcif1 ENSMUSG00000039849 2702 PDX1 C-terminal inhibiting factor 1 [Source:MGI Symbol;Acc:MGI:2443858]







Genes with expression patterns similar to Pcif1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Pcif1 ENSMUSG00000039849 2702 6 1.000 1.000 1.000 1.000 1.000 1.000 PDX1 C-terminal inhibiting factor 1 [Source:MGI Symbol;Acc:MGI:2443858]
2. Lysmd4 ENSMUSG00000043831 336 1.48 - 0.740 - - 0.740 - LysM, putative peptidoglycan-binding, domain containing 4 [Source:MGI Symbol;Acc:MGI:1922349]
3. Zyx ENSMUSG00000029860 4088 0.865 - 0.865 - - - - zyxin [Source:MGI Symbol;Acc:MGI:103072]
4. Rap1b ENSMUSG00000052681 5282 0.827 - 0.827 - - - - RAS related protein 1b [Source:MGI Symbol;Acc:MGI:894315]
5. Ctsd ENSMUSG00000007891 898 0.824 - 0.824 - - - - cathepsin D [Source:MGI Symbol;Acc:MGI:88562]
6. Sdk2 ENSMUSG00000041592 3074 0.819 - 0.819 - - - - sidekick cell adhesion molecule 2 [Source:MGI Symbol;Acc:MGI:2443847]
7. Rxra ENSMUSG00000015846 670 0.814 - 0.814 - - - - retinoid X receptor alpha [Source:MGI Symbol;Acc:MGI:98214]
8. Soat1 ENSMUSG00000026600 1274 0.809 - 0.809 - - - - sterol O-acyltransferase 1 [Source:MGI Symbol;Acc:MGI:104665]
9. Zc4h2 ENSMUSG00000035062 3245 0.807 - 0.807 - - - - zinc finger, C4H2 domain containing [Source:MGI Symbol;Acc:MGI:2679294]
10. Zc3hc1 ENSMUSG00000039130 2638 0.805 - 0.805 - - - - zinc finger, C3HC type 1 [Source:MGI Symbol;Acc:MGI:1916023]
11. Rbm3 ENSMUSG00000031167 840 0.804 - 0.804 - - - - RNA binding motif (RNP1, RRM) protein 3 [Source:MGI Symbol;Acc:MGI:1099460]
12. Xrcc5 ENSMUSG00000026187 1592 0.803 - 0.803 - - - - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:MGI Symbol;Acc:MGI:104517]
13. Nup62 ENSMUSG00000109511 3016 0.798 - 0.798 - - - - nucleoporin 62 [Source:MGI Symbol;Acc:MGI:1351500]
14. Ttc13 ENSMUSG00000037300 1595 0.798 - 0.798 - - - - tetratricopeptide repeat domain 13 [Source:MGI Symbol;Acc:MGI:2384573]
15. 5530601H04Rik ENSMUSG00000087174 1849 0.797 - 0.797 - - - - RIKEN cDNA 5530601H04 gene [Source:MGI Symbol;Acc:MGI:1918695]
16. Wwp1 ENSMUSG00000041058 1490 0.795 - 0.795 - - - - WW domain containing E3 ubiquitin protein ligase 1 [Source:MGI Symbol;Acc:MGI:1861728]
17. Zbtb39 ENSMUSG00000044617 771 0.793 - 0.793 - - - - zinc finger and BTB domain containing 39 [Source:MGI Symbol;Acc:MGI:2443316]
18. Ube2q1 ENSMUSG00000042572 3580 0.792 - 0.792 - - - - ubiquitin-conjugating enzyme E2Q family member 1 [Source:MGI Symbol;Acc:MGI:1917343]
19. Dhx57 ENSMUSG00000035051 1722 0.789 - 0.789 - - - - DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Source:MGI Symbol;Acc:MGI:2147067]
20. Arid3a ENSMUSG00000019564 2116 0.789 - 0.789 - - - - AT rich interactive domain 3A (BRIGHT-like) [Source:MGI Symbol;Acc:MGI:1328360]
21. Med14 ENSMUSG00000064127 1226 0.788 - 0.788 - - - - mediator complex subunit 14 [Source:MGI Symbol;Acc:MGI:1349442]
22. Lrp5 ENSMUSG00000024913 277 0.788 - 0.788 - - - - low density lipoprotein receptor-related protein 5 [Source:MGI Symbol;Acc:MGI:1278315]
23. Mum1l1 ENSMUSG00000042515 1576 0.787 - 0.787 - - - - melanoma associated antigen (mutated) 1-like 1 [Source:MGI Symbol;Acc:MGI:2445062]
24. Bace1 ENSMUSG00000032086 1360 0.787 - - - - 0.787 - beta-site APP cleaving enzyme 1 [Source:MGI Symbol;Acc:MGI:1346542]
25. Nup93 ENSMUSG00000032939 4440 0.786 0.786 - - - - - nucleoporin 93 [Source:MGI Symbol;Acc:MGI:1919055]
26. Secisbp2l ENSMUSG00000035093 3291 0.785 - 0.785 - - - - SECIS binding protein 2-like [Source:MGI Symbol;Acc:MGI:1917604]
27. Timeless ENSMUSG00000039994 1680 0.784 - 0.784 - - - - timeless circadian clock 1 [Source:MGI Symbol;Acc:MGI:1321393]
28. Tns1 ENSMUSG00000055322 2459 0.783 - 0.783 - - - - tensin 1 [Source:MGI Symbol;Acc:MGI:104552]
29. Irak1 ENSMUSG00000031392 3219 0.782 - 0.782 - - - - interleukin-1 receptor-associated kinase 1 [Source:MGI Symbol;Acc:MGI:107420]
30. Map2k3 ENSMUSG00000018932 3443 0.781 - 0.781 - - - - mitogen-activated protein kinase kinase 3 [Source:MGI Symbol;Acc:MGI:1346868]
31. Slain2 ENSMUSG00000036087 2983 0.781 - 0.781 - - - - SLAIN motif family, member 2 [Source:MGI Symbol;Acc:MGI:1923241]
32. Dap ENSMUSG00000039168 1762 0.781 - 0.781 - - - - death-associated protein [Source:MGI Symbol;Acc:MGI:1918190]
33. Hectd3 ENSMUSG00000046861 921 0.78 - 0.780 - - - - HECT domain E3 ubiquitin protein ligase 3 [Source:MGI Symbol;Acc:MGI:1923858]
34. Rp9 ENSMUSG00000032239 2338 0.779 - 0.779 - - - - retinitis pigmentosa 9 (human) [Source:MGI Symbol;Acc:MGI:2157166]
35. Prrx2 ENSMUSG00000039476 1259 0.779 - 0.779 - - - - paired related homeobox 2 [Source:MGI Symbol;Acc:MGI:98218]
36. Ints9 ENSMUSG00000021975 2085 0.778 - 0.778 - - - - integrator complex subunit 9 [Source:MGI Symbol;Acc:MGI:1098533]
37. Slc39a9 ENSMUSG00000048833 2916 0.777 0.777 - - - - - solute carrier family 39 (zinc transporter), member 9 [Source:MGI Symbol;Acc:MGI:1914820]
38. Mpzl1 ENSMUSG00000026566 11257 0.777 0.777 - - - - - myelin protein zero-like 1 [Source:MGI Symbol;Acc:MGI:1915731]
39. Smim19 ENSMUSG00000031534 1771 0.777 - 0.777 - - - - small integral membrane protein 19 [Source:MGI Symbol;Acc:MGI:2142501]
40. Bnip3 ENSMUSG00000078566 3134 0.777 - 0.777 - - - - BCL2/adenovirus E1B interacting protein 3 [Source:MGI Symbol;Acc:MGI:109326]
41. Phpt1 ENSMUSG00000036504 2457 0.774 - 0.774 - - - - phosphohistidine phosphatase 1 [Source:MGI Symbol;Acc:MGI:1922704]
42. Erh ENSMUSG00000021131 10295 0.774 - 0.774 - - - - ERH mRNA splicing and mitosis factor [Source:MGI Symbol;Acc:MGI:108089]
43. Shprh ENSMUSG00000090112 1191 0.773 0.773 - - - - - SNF2 histone linker PHD RING helicase [Source:MGI Symbol;Acc:MGI:1917581]
44. Pacs1 ENSMUSG00000024855 1048 0.771 - 0.771 - - - - phosphofurin acidic cluster sorting protein 1 [Source:MGI Symbol;Acc:MGI:1277113]
45. Dhx16 ENSMUSG00000024422 828 0.771 - 0.771 - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Source:MGI Symbol;Acc:MGI:1916442]
46. Leprot ENSMUSG00000035212 3389 0.77 - 0.770 - - - - leptin receptor overlapping transcript [Source:MGI Symbol;Acc:MGI:2687005]
47. Gm10086 ENSMUSG00000060730 2124 0.77 0.770 - - - - - predicted pseudogene 10086 [Source:MGI Symbol;Acc:MGI:3642342]
48. Hist1h3a ENSMUSG00000069265 213 0.769 - 0.769 - - - - histone cluster 1, H3a [Source:MGI Symbol;Acc:MGI:2668828]
49. Exoc7 ENSMUSG00000020792 1779 0.769 - 0.769 - - - - exocyst complex component 7 [Source:MGI Symbol;Acc:MGI:1859270]
50. 2410006H16Rik ENSMUSG00000086841 2953 0.769 - 0.769 - - - - RIKEN cDNA 2410006H16 gene [Source:MGI Symbol;Acc:MGI:1916471]
51. Akr1e1 ENSMUSG00000045410 1240 0.767 - 0.767 - - - - aldo-keto reductase family 1, member E1 [Source:MGI Symbol;Acc:MGI:1914758]
52. Chic2 ENSMUSG00000029229 3175 0.766 - 0.766 - - - - cysteine-rich hydrophobic domain 2 [Source:MGI Symbol;Acc:MGI:1921527]
53. Cdc25c ENSMUSG00000044201 1273 0.766 - 0.766 - - - - cell division cycle 25C [Source:MGI Symbol;Acc:MGI:88350]
54. Cdr2 ENSMUSG00000030878 1237 0.766 0.766 - - - - - cerebellar degeneration-related 2 [Source:MGI Symbol;Acc:MGI:1100885]
55. Gtse1 ENSMUSG00000022385 1450 0.766 - 0.766 - - - - G two S phase expressed protein 1 [Source:MGI Symbol;Acc:MGI:1352755]
56. Plod3 ENSMUSG00000004846 1917 0.765 - 0.765 - - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 [Source:MGI Symbol;Acc:MGI:1347008]
57. Pcdh7 ENSMUSG00000029108 1122 0.765 - 0.765 - - - - protocadherin 7 [Source:MGI Symbol;Acc:MGI:1860487]
58. Vps54 ENSMUSG00000020128 980 0.764 0.764 - - - - - VPS54 GARP complex subunit [Source:MGI Symbol;Acc:MGI:2178798]
59. Tmem41b ENSMUSG00000047554 1081 0.763 0.763 - - - - - transmembrane protein 41B [Source:MGI Symbol;Acc:MGI:1289225]
60. Prkcsh ENSMUSG00000003402 3565 0.762 - 0.762 - - - - protein kinase C substrate 80K-H [Source:MGI Symbol;Acc:MGI:107877]
61. Cul7 ENSMUSG00000038545 1615 0.761 - 0.761 - - - - cullin 7 [Source:MGI Symbol;Acc:MGI:1913765]
62. Ddx54 ENSMUSG00000029599 3371 0.76 0.760 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Source:MGI Symbol;Acc:MGI:1919240]
63. Rchy1 ENSMUSG00000029397 1938 0.76 - 0.760 - - - - ring finger and CHY zinc finger domain containing 1 [Source:MGI Symbol;Acc:MGI:1915348]
64. Cox19 ENSMUSG00000045438 1299 0.76 - 0.760 - - - - cytochrome c oxidase assembly protein 19 [Source:MGI Symbol;Acc:MGI:1915283]
65. Atxn2 ENSMUSG00000042605 3051 0.76 - 0.760 - - - - ataxin 2 [Source:MGI Symbol;Acc:MGI:1277223]
66. Eid2 ENSMUSG00000046058 2010 0.758 0.758 - - - - - EP300 interacting inhibitor of differentiation 2 [Source:MGI Symbol;Acc:MGI:2681174]
67. Mbnl2 ENSMUSG00000022139 3296 0.758 - 0.758 - - - - muscleblind like splicing factor 2 [Source:MGI Symbol;Acc:MGI:2145597]
68. Gm24803 ENSMUSG00000065627 772 0.756 - 0.756 - - - - predicted gene, 24803 [Source:MGI Symbol;Acc:MGI:5454580]
69. Rnf217 ENSMUSG00000063760 460 0.755 - 0.755 - - - - ring finger protein 217 [Source:MGI Symbol;Acc:MGI:3610311]
70. Dusp5 ENSMUSG00000034765 478 0.754 - 0.754 - - - - dual specificity phosphatase 5 [Source:MGI Symbol;Acc:MGI:2685183]
71. Eea1 ENSMUSG00000036499 1413 0.753 - 0.753 - - - - early endosome antigen 1 [Source:MGI Symbol;Acc:MGI:2442192]
72. Zmynd8 ENSMUSG00000039671 7033 0.751 - 0.751 - - - - zinc finger, MYND-type containing 8 [Source:MGI Symbol;Acc:MGI:1918025]
73. Vrk3 ENSMUSG00000002205 1453 0.75 - 0.750 - - - - vaccinia related kinase 3 [Source:MGI Symbol;Acc:MGI:2182465]
74. Tenm3 ENSMUSG00000031561 2123 0.749 - 0.749 - - - - teneurin transmembrane protein 3 [Source:MGI Symbol;Acc:MGI:1345183]
75. Cthrc1 ENSMUSG00000054196, ENSMUSG00000106929 1536 0.749 - 0.749 - - - - collagen triple helix repeat containing 1 [Source:MGI Symbol;Acc:MGI:1915838]
76. Bap1 ENSMUSG00000021901 2474 0.748 - 0.748 - - - - Brca1 associated protein 1 [Source:MGI Symbol;Acc:MGI:1206586]
77. Gm13349 ENSMUSG00000082520 302 0.748 - 0.748 - - - - predicted gene 13349 [Source:MGI Symbol;Acc:MGI:3649966]
78. Polm ENSMUSG00000020474 386 0.748 - 0.748 - - - - polymerase (DNA directed), mu [Source:MGI Symbol;Acc:MGI:1860191]
79. Mrps6 ENSMUSG00000039680 1637 0.747 - 0.747 - - - - mitochondrial ribosomal protein S6 [Source:MGI Symbol;Acc:MGI:2153111]
80. Ddx19a ENSMUSG00000015023 3351 0.747 - 0.747 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a [Source:MGI Symbol;Acc:MGI:99526]
81. Gm17167 ENSMUSG00000091542 371 0.747 - 0.747 - - - - predicted gene 17167 [Source:MGI Symbol;Acc:MGI:4937994]
82. Cdk12 ENSMUSG00000003119 2101 0.747 - 0.747 - - - - cyclin-dependent kinase 12 [Source:MGI Symbol;Acc:MGI:1098802]
83. Srpk1 ENSMUSG00000004865 5361 0.746 - 0.746 - - - - serine/arginine-rich protein specific kinase 1 [Source:MGI Symbol;Acc:MGI:106908]
84. Pias2 ENSMUSG00000025423 2581 0.746 - 0.746 - - - - protein inhibitor of activated STAT 2 [Source:MGI Symbol;Acc:MGI:1096566]
85. Cenpf ENSMUSG00000026605 6278 0.746 - - - - 0.746 - centromere protein F [Source:MGI Symbol;Acc:MGI:1313302]
86. A130010J15Rik ENSMUSG00000079144 763 0.746 - - - - 0.746 - RIKEN cDNA A130010J15 gene [Source:MGI Symbol;Acc:MGI:2441776]
87. Kat7 ENSMUSG00000038909 2653 0.746 - 0.746 - - - - K(lysine) acetyltransferase 7 [Source:MGI Symbol;Acc:MGI:2182799]
88. Zmynd11 ENSMUSG00000021156 12876 0.746 - 0.746 - - - - zinc finger, MYND domain containing 11 [Source:MGI Symbol;Acc:MGI:1913755]
89. Rnaseh2c ENSMUSG00000024925 2015 0.745 0.745 - - - - - ribonuclease H2, subunit C [Source:MGI Symbol;Acc:MGI:1915459]
90. Eif2ak1 ENSMUSG00000029613 4174 0.745 0.745 - - - - - eukaryotic translation initiation factor 2 alpha kinase 1 [Source:MGI Symbol;Acc:MGI:1353448]
91. 4933434E20Rik ENSMUSG00000027942 2164 0.745 - 0.745 - - - - RIKEN cDNA 4933434E20 gene [Source:MGI Symbol;Acc:MGI:1914027]
92. Thumpd3 ENSMUSG00000030264 1038 0.745 - 0.745 - - - - THUMP domain containing 3 [Source:MGI Symbol;Acc:MGI:1277973]
93. Gng11 ENSMUSG00000032766 1581 0.744 - 0.744 - - - - guanine nucleotide binding protein (G protein), gamma 11 [Source:MGI Symbol;Acc:MGI:1913316]
94. Lig4 ENSMUSG00000049717 564 0.744 0.744 - - - - - ligase IV, DNA, ATP-dependent [Source:MGI Symbol;Acc:MGI:1335098]
95. Pfdn1 ENSMUSG00000024346 2808 0.743 0.743 - - - - - prefoldin 1 [Source:MGI Symbol;Acc:MGI:1914449]
96. Ddx52 ENSMUSG00000020677 2667 0.743 - - - - 0.743 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Source:MGI Symbol;Acc:MGI:1925644]
97. Tbc1d19 ENSMUSG00000039178 1119 0.743 0.743 - - - - - TBC1 domain family, member 19 [Source:MGI Symbol;Acc:MGI:1914499]
98. Mfsd5 ENSMUSG00000045665 541 0.743 - 0.743 - - - - major facilitator superfamily domain containing 5 [Source:MGI Symbol;Acc:MGI:2145901]
99. Zmym5 ENSMUSG00000040123 1253 0.743 - 0.743 - - - - zinc finger, MYM-type 5 [Source:MGI Symbol;Acc:MGI:3041170]
100. Zfp740 ENSMUSG00000046897 1171 0.742 - 0.742 - - - - zinc finger protein 740 [Source:MGI Symbol;Acc:MGI:1915994]

There are 172 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA