Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Msx2

Gene Name Gene ID Reads Annotation
Msx2 ENSMUSG00000021469 389 msh homeobox 2 [Source:MGI Symbol;Acc:MGI:97169]







Genes with expression patterns similar to Msx2

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Msx2 ENSMUSG00000021469 389 6 1.000 1.000 1.000 1.000 1.000 1.000 msh homeobox 2 [Source:MGI Symbol;Acc:MGI:97169]
2. Asun 1660 1.732 - 0.914 - - 0.818 - asunder, spermatogenesis regulator, transcript variant X2
3. 2610035F20Rik ENSMUSG00000085555 139 0.966 - - - - 0.966 - RIKEN cDNA 2610035F20 gene [Source:MGI Symbol;Acc:MGI:1916498]
4. Gareml 193 0.952 - - - - 0.952 - GRB2 associated, regulator of MAPK1-like
5. Slc35f1 ENSMUSG00000038602 342 0.951 - - - - 0.951 - solute carrier family 35, member F1 [Source:MGI Symbol;Acc:MGI:2139810]
6. Zfp125 ENSMUSG00000069755 218 0.949 - - - - 0.949 - zinc finger protein 125 [Source:MGI Symbol;Acc:MGI:1336211]
7. Nr4a3 ENSMUSG00000028341 474 0.948 - - - - 0.948 - nuclear receptor subfamily 4, group A, member 3 [Source:MGI Symbol;Acc:MGI:1352457]
8. Rab39b ENSMUSG00000031202 360 0.947 - - - - 0.947 - RAB39B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1915040]
9. Ing5 ENSMUSG00000026283 657 0.945 - - - - 0.945 - inhibitor of growth family, member 5 [Source:MGI Symbol;Acc:MGI:1922816]
10. Tmed7 ENSMUSG00000033184 2427 0.945 - 0.945 - - - - transmembrane p24 trafficking protein 7 [Source:MGI Symbol;Acc:MGI:1913926]
11. Dhtkd1 ENSMUSG00000025815 258 0.942 - - - - 0.942 - dehydrogenase E1 and transketolase domain containing 1 [Source:MGI Symbol;Acc:MGI:2445096]
12. Ankrd13c ENSMUSG00000039988 429 0.939 - - - - 0.939 - ankyrin repeat domain 13c [Source:MGI Symbol;Acc:MGI:2139746]
13. Maz ENSMUSG00000030678 250 0.937 - - - - 0.937 - MYC-associated zinc finger protein (purine-binding transcription factor) [Source:MGI Symbol;Acc:MGI:1338823]
14. Mdga1 ENSMUSG00000043557 531 0.937 - - - - 0.937 - MAM domain containing glycosylphosphatidylinositol anchor 1 [Source:MGI Symbol;Acc:MGI:1922012]
15. Gm6136 ENSMUSG00000084106 261 0.936 - - - - 0.936 - predicted pseudogene 6136 [Source:MGI Symbol;Acc:MGI:3646897]
16. Shb ENSMUSG00000044813 322 0.935 - - - - 0.935 - src homology 2 domain-containing transforming protein B [Source:MGI Symbol;Acc:MGI:98294]
17. Sphk1 ENSMUSG00000061878 72 0.935 - - - - 0.935 - sphingosine kinase 1 [Source:MGI Symbol;Acc:MGI:1316649]
18. Tmem163 ENSMUSG00000026347 282 0.934 - - - - 0.934 - transmembrane protein 163 [Source:MGI Symbol;Acc:MGI:1919410]
19. Hap1 ENSMUSG00000006930 613 0.933 - - - - 0.933 - huntingtin-associated protein 1 [Source:MGI Symbol;Acc:MGI:1261831]
20. Gm11792 ENSMUSG00000083137 57 0.932 - - - - 0.932 - predicted gene 11792 [Source:MGI Symbol;Acc:MGI:3652127]
21. Gm26764 ENSMUSG00000097667 599 0.932 - - - - 0.932 - predicted gene, 26764 [Source:MGI Symbol;Acc:MGI:5477258]
22. Gm13132 ENSMUSG00000081276 68 0.932 - - - - 0.932 - predicted gene 13132 [Source:MGI Symbol;Acc:MGI:3651366]
23. Barhl2 ENSMUSG00000034384 99 0.932 - - - - 0.932 - BarH like homeobox 2 [Source:MGI Symbol;Acc:MGI:1859314]
24. Pinx1 ENSMUSG00000021958 1439 0.932 - - - - 0.932 - PIN2/TERF1 interacting, telomerase inhibitor 1 [Source:MGI Symbol;Acc:MGI:1919650]
25. Mrap ENSMUSG00000039956 92 0.932 - - - - 0.932 - melanocortin 2 receptor accessory protein [Source:MGI Symbol;Acc:MGI:1924287]
26. Cldn1 ENSMUSG00000022512 77 0.931 - - - - 0.931 - claudin 1 [Source:MGI Symbol;Acc:MGI:1276109]
27. Gtf2h4 ENSMUSG00000001524 502 0.931 - - - - 0.931 - general transcription factor II H, polypeptide 4 [Source:MGI Symbol;Acc:MGI:1338799]
28. Gm20605 ENSMUSG00000029720 375 0.931 - - - - 0.931 - predicted gene 20605 [Source:MGI Symbol;Acc:MGI:5306917]
29. Tchh ENSMUSG00000052415 60 0.929 - - - - 0.929 - trichohyalin [Source:MGI Symbol;Acc:MGI:2177944]
30. Adcy7 ENSMUSG00000031659 202 0.927 - - - - 0.927 - adenylate cyclase 7 [Source:MGI Symbol;Acc:MGI:102891]
31. C130036L24Rik ENSMUSG00000073627 155 0.927 - - - - 0.927 - RIKEN cDNA C130036L24 gene [Source:MGI Symbol;Acc:MGI:2441877]
32. Gm16551 ENSMUSG00000066477 147 0.926 - - - - 0.926 - predicted gene 16551 [Source:MGI Symbol;Acc:MGI:4414971]
33. Pabpn1 ENSMUSG00000022194 1359 0.926 - - - - 0.926 - poly(A) binding protein, nuclear 1 [Source:MGI Symbol;Acc:MGI:1859158]
34. Ptgr2 ENSMUSG00000072946 410 0.925 - - - - 0.925 - prostaglandin reductase 2 [Source:MGI Symbol;Acc:MGI:1916372]
35. Myo16 ENSMUSG00000039057 160 0.924 - - - - 0.924 - myosin XVI [Source:MGI Symbol;Acc:MGI:2685951]
36. Amz2 ENSMUSG00000020610 1283 0.923 - 0.923 - - - - archaelysin family metallopeptidase 2 [Source:MGI Symbol;Acc:MGI:104837]
37. Rps12l2 Rps12l2 94 0.923 - - - - 0.923 -
38. Grik5 ENSMUSG00000003378 363 0.923 - - - - 0.923 - glutamate receptor, ionotropic, kainate 5 (gamma 2) [Source:MGI Symbol;Acc:MGI:95818]
39. Adamtsl1 ENSMUSG00000066113 393 0.922 - - - - 0.922 - ADAMTS-like 1 [Source:MGI Symbol;Acc:MGI:1924989]
40. Gm12191 ENSMUSG00000083061 359 0.922 - - - - 0.922 - predicted gene 12191 [Source:MGI Symbol;Acc:MGI:3651293]
41. Wnt3 ENSMUSG00000000125 142 0.922 - - - - 0.922 - wingless-type MMTV integration site family, member 3 [Source:MGI Symbol;Acc:MGI:98955]
42. Lrp2 ENSMUSG00000027070 303 0.921 - - - - 0.921 - low density lipoprotein receptor-related protein 2 [Source:MGI Symbol;Acc:MGI:95794]
43. Zswim7 ENSMUSG00000014243 799 0.92 - - - - 0.920 - zinc finger SWIM-type containing 7 [Source:MGI Symbol;Acc:MGI:1916997]
44. Gm5863 ENSMUSG00000082927 407 0.92 - - - - 0.920 - predicted gene 5863 [Source:MGI Symbol;Acc:MGI:3648580]
45. Ticrr ENSMUSG00000046591 631 0.92 - - - - 0.920 - TOPBP1-interacting checkpoint and replication regulator [Source:MGI Symbol;Acc:MGI:1924261]
46. Trak1 ENSMUSG00000032536 705 0.919 - - - - 0.919 - trafficking protein, kinesin binding 1 [Source:MGI Symbol;Acc:MGI:1914345]
47. Sez6 ENSMUSG00000000632 145 0.918 - - - - 0.918 - seizure related gene 6 [Source:MGI Symbol;Acc:MGI:104745]
48. Hps3 ENSMUSG00000027615 596 0.918 - - - - 0.918 - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:MGI Symbol;Acc:MGI:2153839]
49. E130309D02Rik ENSMUSG00000039244 390 0.917 - - - - 0.917 - RIKEN cDNA E130309D02 gene [Source:MGI Symbol;Acc:MGI:2442621]
50. Wdr19 ENSMUSG00000037890 402 0.917 - - - - 0.917 - WD repeat domain 19 [Source:MGI Symbol;Acc:MGI:2443231]
51. Sik2 ENSMUSG00000037112 1369 0.917 - - - - 0.917 - salt inducible kinase 2 [Source:MGI Symbol;Acc:MGI:2445031]
52. Zfp414 ENSMUSG00000073423 326 0.915 - - - - 0.915 - zinc finger protein 414 [Source:MGI Symbol;Acc:MGI:1915641]
53. Mkrn3 ENSMUSG00000070527 269 0.914 - - - - 0.914 - makorin, ring finger protein, 3 [Source:MGI Symbol;Acc:MGI:2181178]
54. Arxes1 ENSMUSG00000048355 2222 0.914 - 0.914 - - - - adipocyte-related X-chromosome expressed sequence 1 [Source:MGI Symbol;Acc:MGI:1923469]
55. 4931414P19Rik ENSMUSG00000022179 746 0.913 - - - - 0.913 - RIKEN cDNA 4931414P19 gene [Source:MGI Symbol;Acc:MGI:1921609]
56. Sorbs3 ENSMUSG00000022091 397 0.913 - - - - 0.913 - sorbin and SH3 domain containing 3 [Source:MGI Symbol;Acc:MGI:700013]
57. Rbm38 ENSMUSG00000027510 566 0.912 - - - - 0.912 - RNA binding motif protein 38 [Source:MGI Symbol;Acc:MGI:1889294]
58. Gm26737 ENSMUSG00000097467 966 0.912 - - - - 0.912 - predicted gene, 26737 [Source:MGI Symbol;Acc:MGI:5477231]
59. Pard6b ENSMUSG00000044641 535 0.911 - - - - 0.911 - par-6 family cell polarity regulator beta [Source:MGI Symbol;Acc:MGI:2135605]
60. Gm11539 ENSMUSG00000083337 746 0.91 - - - - 0.910 - predicted gene 11539 [Source:MGI Symbol;Acc:MGI:3651911]
61. Tnrc18 ENSMUSG00000039477 1051 0.91 - - - - 0.910 - trinucleotide repeat containing 18 [Source:MGI Symbol;Acc:MGI:3648294]
62. Fam76a ENSMUSG00000028878 1028 0.909 - - - - 0.909 - family with sequence similarity 76, member A [Source:MGI Symbol;Acc:MGI:2385211]
63. Gm16287 ENSMUSG00000073739 273 0.908 - - - - 0.908 - predicted gene 16287 [Source:MGI Symbol;Acc:MGI:3650322]
64. Ypel3 ENSMUSG00000042675 3138 0.908 - - - - 0.908 - yippee like 3 [Source:MGI Symbol;Acc:MGI:1913340]
65. Amacr ENSMUSG00000022244 358 0.907 - - - - 0.907 - alpha-methylacyl-CoA racemase [Source:MGI Symbol;Acc:MGI:1098273]
66. 3110043O21Rik 488 0.907 - - - - 0.907 - RIKEN cDNA 3110043O21 gene, transcript variant X2
67. Kifap3 ENSMUSG00000026585 2025 0.906 - 0.906 - - - - kinesin-associated protein 3 [Source:MGI Symbol;Acc:MGI:107566]
68. Gm11961 ENSMUSG00000056288 300 0.905 - - - - 0.905 - predicted gene 11961 [Source:MGI Symbol;Acc:MGI:3652303]
69. Igfbpl1 ENSMUSG00000035551 856 0.904 - - - - 0.904 - insulin-like growth factor binding protein-like 1 [Source:MGI Symbol;Acc:MGI:1933198]
70. Vav2 ENSMUSG00000009621 1210 0.904 - - - - 0.904 - vav 2 oncogene [Source:MGI Symbol;Acc:MGI:102718]
71. Aifm2 ENSMUSG00000020085 140 0.904 - - - - 0.904 - apoptosis-inducing factor, mitochondrion-associated 2 [Source:MGI Symbol;Acc:MGI:1918611]
72. 2310035C23Rik 513 0.903 - - - - 0.903 - RIKEN cDNA 2310035C23 gene, transcript variant X14
73. Enthd2 271 0.902 - - - - 0.902 - ENTH domain containing 2, transcript variant X3
74. Slc1a3 ENSMUSG00000005360 3190 0.902 - 0.902 - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3 [Source:MGI Symbol;Acc:MGI:99917]
75. Trim45 ENSMUSG00000033233 404 0.902 - - - - 0.902 - tripartite motif-containing 45 [Source:MGI Symbol;Acc:MGI:1918187]
76. Tceal3 ENSMUSG00000044550 742 0.901 - - - - 0.901 - transcription elongation factor A (SII)-like 3 [Source:MGI Symbol;Acc:MGI:1913354]
77. Arl6 ENSMUSG00000022722 609 0.9 - - - - 0.900 - ADP-ribosylation factor-like 6 [Source:MGI Symbol;Acc:MGI:1927136]
78. Pknox1 ENSMUSG00000006705 1830 0.9 - 0.900 - - - - Pbx/knotted 1 homeobox [Source:MGI Symbol;Acc:MGI:1201409]
79. Gmpr ENSMUSG00000000253 996 0.899 - - - - 0.899 - guanosine monophosphate reductase [Source:MGI Symbol;Acc:MGI:1913605]
80. 1600002H07Rik 740 0.899 - - - - 0.899 - RIKEN cDNA 1600002H07 gene, transcript variant X2
81. Tmem63b ENSMUSG00000036026 357 0.899 - - - - 0.899 - transmembrane protein 63b [Source:MGI Symbol;Acc:MGI:2387609]
82. Fam73a 1247 0.898 - - - - 0.898 - family with sequence similarity 73, member A, transcript variant X2
83. 1110032F04Rik ENSMUSG00000046999 184 0.898 - - - - 0.898 - RIKEN cDNA 1110032F04 gene [Source:MGI Symbol;Acc:MGI:1915975]
84. Cep120 ENSMUSG00000048799 1152 0.898 - - - - 0.898 - centrosomal protein 120 [Source:MGI Symbol;Acc:MGI:2147298]
85. Tmem39a ENSMUSG00000002845 1066 0.898 - - - - 0.898 - transmembrane protein 39a [Source:MGI Symbol;Acc:MGI:1915096]
86. Nkain1 ENSMUSG00000078532 323 0.897 - - - - 0.897 - Na+/K+ transporting ATPase interacting 1 [Source:MGI Symbol;Acc:MGI:1914399]
87. Lrrc4b ENSMUSG00000047085 349 0.896 - - - - 0.896 - leucine rich repeat containing 4B [Source:MGI Symbol;Acc:MGI:3027390]
88. Nudt10 ENSMUSG00000073293 707 0.896 - - - - 0.896 - nudix (nucleoside diphosphate linked moiety X)-type motif 10 [Source:MGI Symbol;Acc:MGI:2147931]
89. Ift81 ENSMUSG00000029469 806 0.896 - - - - 0.896 - intraflagellar transport 81 [Source:MGI Symbol;Acc:MGI:1098597]
90. Lin37 ENSMUSG00000036845 280 0.896 - - - - 0.896 - lin-37 homolog (C. elegans) [Source:MGI Symbol;Acc:MGI:1922910]
91. Ubap1 ENSMUSG00000028437 2702 0.895 - - - - 0.895 - ubiquitin-associated protein 1 [Source:MGI Symbol;Acc:MGI:2149543]
92. Stk19 ENSMUSG00000061207 621 0.894 - - - - 0.894 - serine/threonine kinase 19 [Source:MGI Symbol;Acc:MGI:1860085]
93. Gm5776 ENSMUSG00000099647 589 0.894 - - - - 0.894 - predicted gene 5776 [Source:MGI Symbol;Acc:MGI:3647650]
94. Abcb8 ENSMUSG00000028973 649 0.894 - - - - 0.894 - ATP-binding cassette, sub-family B (MDR/TAP), member 8 [Source:MGI Symbol;Acc:MGI:1351667]
95. Alg8 ENSMUSG00000035704 1502 0.894 - - - - 0.894 - asparagine-linked glycosylation 8 (alpha-1,3-glucosyltransferase) [Source:MGI Symbol;Acc:MGI:2141959]
96. Zdhhc4 ENSMUSG00000001844 1297 0.894 - - - - 0.894 - zinc finger, DHHC domain containing 4 [Source:MGI Symbol;Acc:MGI:1920131]
97. Tmem204 ENSMUSG00000024168 307 0.893 - - - - 0.893 - transmembrane protein 204 [Source:MGI Symbol;Acc:MGI:3039635]
98. 1110034G24Rik 289 0.893 - - - - 0.893 - RIKEN cDNA 1110034G24 gene, transcript variant X6
99. Ept1 1334 0.893 - - - - 0.893 - ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)
100. Tmem138 ENSMUSG00000024666 1036 0.893 - - - - 0.893 - transmembrane protein 138 [Source:MGI Symbol;Acc:MGI:1920232]

There are 362 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA