Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Msr1

Gene Name Gene ID Reads Annotation
Msr1 ENSMUSG00000025044 18 macrophage scavenger receptor 1 [Source:MGI Symbol;Acc:MGI:98257]







Genes with expression patterns similar to Msr1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Msr1 ENSMUSG00000025044 18 6 1.000 1.000 1.000 1.000 1.000 1.000 macrophage scavenger receptor 1 [Source:MGI Symbol;Acc:MGI:98257]
2. Spns3 ENSMUSG00000020798 11 1.963 - 0.963 1.000 - - - spinster homolog 3 [Source:MGI Symbol;Acc:MGI:1924827]
3. C230004F18Rik ENSMUSG00000071753 15 1.871 - 0.963 - - - 0.908 RIKEN cDNA C230004F18 gene [Source:MGI Symbol;Acc:MGI:3041217]
4. Wdr63 ENSMUSG00000043020 2 1.738 - 0.738 1.000 - - - WD repeat domain 63 [Source:MGI Symbol;Acc:MGI:3045269]
5. Traf1 ENSMUSG00000026875 9 1.69 - 0.963 - - 0.727 - TNF receptor-associated factor 1 [Source:MGI Symbol;Acc:MGI:101836]
6. Ttc24 ENSMUSG00000051036 3 1.69 - 0.963 - - 0.727 - tetratricopeptide repeat domain 24 [Source:MGI Symbol;Acc:MGI:2443841]
7. D930030I03Rik ENSMUSG00000097576 21 1 1.000 - - - - - RIKEN cDNA D930030I03 gene [Source:MGI Symbol;Acc:MGI:2444245]
8. Slc44a4 ENSMUSG00000007034 1 1 1.000 - - - - - solute carrier family 44, member 4 [Source:MGI Symbol;Acc:MGI:1917379]
9. D7Ertd443e ENSMUSG00000030994 4 1 1.000 - - - - - DNA segment, Chr 7, ERATO Doi 443, expressed [Source:MGI Symbol;Acc:MGI:1196431]
10. Gm1305 2 1 1.000 - - - - - predicted gene 1305
11. Fxyd3 ENSMUSG00000057092 0 1 - - 1.000 - - - FXYD domain-containing ion transport regulator 3 [Source:MGI Symbol;Acc:MGI:107497]
12. Gm3571 ENSMUSG00000090610 11 1 1.000 - - - - - predicted gene 3571 [Source:MGI Symbol;Acc:MGI:3781748]
13. Gm26761 ENSMUSG00000097668 3 1 - - 1.000 - - - predicted gene, 26761 [Source:MGI Symbol;Acc:MGI:5477255]
14. Gm13879 ENSMUSG00000082845 1 1 1.000 - - - - - predicted gene 13879 [Source:MGI Symbol;Acc:MGI:3649538]
15. Rps12-ps14 ENSMUSG00000095499 0 1 - - 1.000 - - - ribosomal protein S12, pseudogene 14 [Source:MGI Symbol;Acc:MGI:3646259]
16. Slc25a34 ENSMUSG00000040740 6 1 1.000 - - - - - solute carrier family 25, member 34 [Source:MGI Symbol;Acc:MGI:2686215]
17. Cyp4f17 ENSMUSG00000091586 2 1 - - 1.000 - - - cytochrome P450, family 4, subfamily f, polypeptide 17 [Source:MGI Symbol;Acc:MGI:3646233]
18. Cryge ENSMUSG00000070870 4 1 1.000 - - - - - crystallin, gamma E [Source:MGI Symbol;Acc:MGI:88525]
19. Gm22804 ENSMUSG00000088677 0 1 1.000 - - - - - predicted gene, 22804 [Source:MGI Symbol;Acc:MGI:5452581]
20. AY512915 ENSMUSG00000068180 3 1 1.000 - - - - - cDNA sequence AY512915 [Source:MGI Symbol;Acc:MGI:3041245]
21. Gm14858 ENSMUSG00000085568 1 1 1.000 - - - - - predicted gene 14858 [Source:MGI Symbol;Acc:MGI:3705120]
22. Gm15400 ENSMUSG00000080842 2 1 - - 1.000 - - - predicted gene 15400 [Source:MGI Symbol;Acc:MGI:3705651]
23. 9530027J09Rik ENSMUSG00000097197 5 1 1.000 - - - - - RIKEN cDNA 9530027J09 gene [Source:MGI Symbol;Acc:MGI:4820557]
24. Olfr173 ENSMUSG00000049362 0 1 1.000 - - - - - olfactory receptor 173 [Source:MGI Symbol;Acc:MGI:3030007]
25. Gm3510 ENSMUSG00000096936 5 1 1.000 - - - - - predicted gene 3510 [Source:MGI Symbol;Acc:MGI:3781687]
26. Cdh9 ENSMUSG00000025370 9 1 1.000 - - - - - cadherin 9 [Source:MGI Symbol;Acc:MGI:107433]
27. Il12b ENSMUSG00000004296 0 1 1.000 - - - - - interleukin 12b [Source:MGI Symbol;Acc:MGI:96540]
28. Ckmt1 ENSMUSG00000000308 27 1 1.000 - - - - - creatine kinase, mitochondrial 1, ubiquitous [Source:MGI Symbol;Acc:MGI:99441]
29. Card11 ENSMUSG00000036526 3 1 - - 1.000 - - - caspase recruitment domain family, member 11 [Source:MGI Symbol;Acc:MGI:1916978]
30. Cyp2b9 ENSMUSG00000040660 0 1 1.000 - - - - - cytochrome P450, family 2, subfamily b, polypeptide 9 [Source:MGI Symbol;Acc:MGI:88600]
31. Gm15877 ENSMUSG00000081550 1 1 - - 1.000 - - - predicted gene 15877 [Source:MGI Symbol;Acc:MGI:3801978]
32. Gm26592 ENSMUSG00000097535 2 1 - - 1.000 - - - predicted gene, 26592 [Source:MGI Symbol;Acc:MGI:5477086]
33. Gm2716 ENSMUSG00000110719 0 1 - - 1.000 - - - predicted gene 2716 [Source:MGI Symbol;Acc:MGI:3780885]
34. Gm16153 ENSMUSG00000085687 6 1 1.000 - - - - - predicted gene 16153 [Source:MGI Symbol;Acc:MGI:3802057]
35. Xlr3c ENSMUSG00000058147 7 1 1.000 - - - - - X-linked lymphocyte-regulated 3C [Source:MGI Symbol;Acc:MGI:3047103]
36. Ceacam10 ENSMUSG00000054169 3 1 - - 1.000 - - - carcinoembryonic antigen-related cell adhesion molecule 10 [Source:MGI Symbol;Acc:MGI:1347248]
37. Zg16 ENSMUSG00000049350 2 1 - - 1.000 - - - zymogen granule protein 16 [Source:MGI Symbol;Acc:MGI:1916286]
38. Rps19-ps12 ENSMUSG00000097552 1 1 - - 1.000 - - - ribosomal protein S19, pseudogene 12 [Source:MGI Symbol;Acc:MGI:3645928]
39. Gm7879 ENSMUSG00000033036 6 1 - - 1.000 - - - predicted pseudogene 7879 [Source:MGI Symbol;Acc:MGI:3645078]
40. Gm8865 ENSMUSG00000086420 9 1 - - 1.000 - - - predicted gene 8865 [Source:MGI Symbol;Acc:MGI:3647567]
41. Gm10499 ENSMUSG00000073403 0 1 1.000 - - - - - predicted gene 10499 [Source:MGI Symbol;Acc:MGI:3702919]
42. Gm6570 5 1 1.000 - - - - - predicted gene 6570
43. Gm15506 ENSMUSG00000086477 7 1 1.000 - - - - - predicted gene 15506 [Source:MGI Symbol;Acc:MGI:3782954]
44. Gm15929 ENSMUSG00000086032 3 1 1.000 - - - - - predicted gene 15929 [Source:MGI Symbol;Acc:MGI:3802090]
45. Defb48 ENSMUSG00000075574 1 1 1.000 - - - - - defensin beta 48 [Source:MGI Symbol;Acc:MGI:3646223]
46. E130215H24Rik ENSMUSG00000087406 1 1 - - 1.000 - - - RIKEN cDNA E130215H24 gene [Source:MGI Symbol;Acc:MGI:1926091]
47. Slfn14 ENSMUSG00000082101, ENSMUSG00000116327 14 1 - - 1.000 - - - schlafen 14 [Source:MGI Symbol;Acc:MGI:2684866]
48. Zfp853 ENSMUSG00000093910 3 1 1.000 - - - - - zinc finger protein 853 [Source:MGI Symbol;Acc:MGI:2685638]
49. B230322F03Rik ENSMUSG00000097509 5 1 1.000 - - - - - RIKEN cDNA B230322F03 gene [Source:MGI Symbol;Acc:MGI:3704291]
50. Clec4n ENSMUSG00000023349 4 1 1.000 - - - - - C-type lectin domain family 4, member n [Source:MGI Symbol;Acc:MGI:1861231]
51. Cyct ENSMUSG00000056436 7 1 1.000 - - - - - cytochrome c, testis [Source:MGI Symbol;Acc:MGI:88579]
52. 1700040D17Rik ENSMUSG00000097515 9 1 1.000 - - - - - RIKEN cDNA 1700040D17 gene [Source:MGI Symbol;Acc:MGI:1923852]
53. Gm15905 ENSMUSG00000085993 17 1 - - 1.000 - - - predicted gene 15905 [Source:MGI Symbol;Acc:MGI:3802059]
54. Lancl3 ENSMUSG00000047344 10 1 1.000 - - - - - LanC lantibiotic synthetase component C-like 3 (bacterial) [Source:MGI Symbol;Acc:MGI:2443335]
55. 4930597O21Rik ENSMUSG00000053442 1 1 - - 1.000 - - - RIKEN cDNA 4930597O21 gene [Source:MGI Symbol;Acc:MGI:1922623]
56. Gm26008 ENSMUSG00000089422 6 1 - - 1.000 - - - predicted gene, 26008 [Source:MGI Symbol;Acc:MGI:5455785]
57. Gm5864 ENSMUSG00000107211 11 1 - - 1.000 - - - predicted gene 5864 [Source:MGI Symbol;Acc:MGI:3648579]
58. Mroh3 ENSMUSG00000087230 6 1 1.000 - - - - - maestro heat-like repeat family member 3 [Source:MGI Symbol;Acc:MGI:1923672]
59. Tnfrsf17 ENSMUSG00000022496 2 1 - - 1.000 - - - tumor necrosis factor receptor superfamily, member 17 [Source:MGI Symbol;Acc:MGI:1343050]
60. Tmem181b-ps ENSMUSG00000096780 8 1 1.000 - - - - - transmembrane protein 181B, pseudogene [Source:MGI Symbol;Acc:MGI:3779544]
61. Gm12050 ENSMUSG00000085856 4 1 1.000 - - - - - predicted gene 12050 [Source:MGI Symbol;Acc:MGI:3652080]
62. n-R5s29 ENSMUSG00000064770 0 1 1.000 - - - - - nuclear encoded rRNA 5S 29 [Source:MGI Symbol;Acc:MGI:4421874]
63. Capn9 ENSMUSG00000031981 7 1 1.000 - - - - - calpain 9 [Source:MGI Symbol;Acc:MGI:1920897]
64. Trim30b ENSMUSG00000052749 1 1 1.000 - - - - - tripartite motif-containing 30B [Source:MGI Symbol;Acc:MGI:4821256]
65. Gm26860 ENSMUSG00000097008 3 1 1.000 - - - - - predicted gene, 26860 [Source:MGI Symbol;Acc:MGI:5477354]
66. Slc44a3 ENSMUSG00000039865 1 1 1.000 - - - - - solute carrier family 44, member 3 [Source:MGI Symbol;Acc:MGI:2384860]
67. Glra3 ENSMUSG00000038257 8 1 1.000 - - - - - glycine receptor, alpha 3 subunit [Source:MGI Symbol;Acc:MGI:95749]
68. Gm23100 ENSMUSG00000065389 0 1 1.000 - - - - - predicted gene, 23100 [Source:MGI Symbol;Acc:MGI:5452877]
69. Rps27 ENSMUSG00000090733 17 1 1.000 - - - - - ribosomal protein S27 [Source:MGI Symbol;Acc:MGI:1888676]
70. Slc22a30 ENSMUSG00000052562 5 1 1.000 - - - - - solute carrier family 22, member 30 [Source:MGI Symbol;Acc:MGI:2442750]
71. Gm14537 ENSMUSG00000082855 7 1 1.000 - - - - - predicted gene 14537 [Source:MGI Symbol;Acc:MGI:3648060]
72. 5730588L14Rik 5730588L14Rik 1 1 - - 1.000 - - -
73. Gm5082 ENSMUSG00000054258 1 1 1.000 - - - - - predicted gene 5082 [Source:MGI Symbol;Acc:MGI:3644232]
74. Gm5068 Gm5068 1 1 1.000 - - - - -
75. Ccdc33 ENSMUSG00000037716 9 1 - - 1.000 - - - coiled-coil domain containing 33 [Source:MGI Symbol;Acc:MGI:1922464]
76. Gm26815 ENSMUSG00000097384 0 1 - - 1.000 - - - predicted gene, 26815 [Source:MGI Symbol;Acc:MGI:5477309]
77. Gm6506 ENSMUSG00000082233 0 1 - - 1.000 - - - predicted gene 6506 [Source:MGI Symbol;Acc:MGI:3645107]
78. Gm12219 ENSMUSG00000080768 1 1 - - 1.000 - - - predicted gene 12219 [Source:MGI Symbol;Acc:MGI:3649338]
79. Sep-05 Sep-05 16 1 1.000 - - - - -
80. Pla2g4e ENSMUSG00000050211 1 1 - - 1.000 - - - phospholipase A2, group IVE [Source:MGI Symbol;Acc:MGI:1919144]
81. Gm11714 ENSMUSG00000087113 3 1 1.000 - - - - - predicted gene 11714 [Source:MGI Symbol;Acc:MGI:3649214]
82. Klkb1 ENSMUSG00000109764 4 1 1.000 - - - - - kallikrein B, plasma 1 [Source:MGI Symbol;Acc:MGI:102849]
83. Gm10260 ENSMUSG00000069117 0 1 - - 1.000 - - - predicted gene 10260 [Source:MGI Symbol;Acc:MGI:3642298]
84. Sycp2l ENSMUSG00000038651 1 1 1.000 - - - - - synaptonemal complex protein 2-like [Source:MGI Symbol;Acc:MGI:2685114]
85. Gm16565 ENSMUSG00000089829 3 1 1.000 - - - - - predicted gene 16565 [Source:MGI Symbol;Acc:MGI:4414985]
86. Cxcl1 ENSMUSG00000029380 4 1 1.000 - - - - - chemokine (C-X-C motif) ligand 1 [Source:MGI Symbol;Acc:MGI:108068]
87. 1700067K01Rik ENSMUSG00000046408 12 1 - - 1.000 - - - RIKEN cDNA 1700067K01 gene [Source:MGI Symbol;Acc:MGI:1920703]
88. Hspe1-ps3 ENSMUSG00000092344 0 1 1.000 - - - - - heat shock protein 1 (chaperonin 10), pseudogene 3 [Source:MGI Symbol;Acc:MGI:1935163]
89. Pfn3 ENSMUSG00000044444 1 1 1.000 - - - - - profilin 3 [Source:MGI Symbol;Acc:MGI:2178800]
90. Muc20 ENSMUSG00000035638 1 1 1.000 - - - - - mucin 20 [Source:MGI Symbol;Acc:MGI:2385039]
91. 9230105E05Rik ENSMUSG00000090191 5 1 1.000 - - - - - RIKEN cDNA 9230105E05 gene [Source:MGI Symbol;Acc:MGI:2444388]
92. Gm25076 ENSMUSG00000095477 5 1 - - 1.000 - - - predicted gene, 25076 [Source:MGI Symbol;Acc:MGI:5454853]
93. 4930423M02Rik ENSMUSG00000086066 0 1 1.000 - - - - - RIKEN cDNA 4930423M02 gene [Source:MGI Symbol;Acc:MGI:1921122]
94. Gm16793 ENSMUSG00000097357 5 1 1.000 - - - - - predicted gene, 16793 [Source:MGI Symbol;Acc:MGI:4439717]
95. Scn7a ENSMUSG00000034810 23 1 1.000 - - - - - sodium channel, voltage-gated, type VII, alpha [Source:MGI Symbol;Acc:MGI:102965]
96. Il27ra ENSMUSG00000005465 3 1 1.000 - - - - - interleukin 27 receptor, alpha [Source:MGI Symbol;Acc:MGI:1355318]
97. Kcne4 ENSMUSG00000047330 52 1 1.000 - - - - - potassium voltage-gated channel, Isk-related subfamily, gene 4 [Source:MGI Symbol;Acc:MGI:1891125]
98. Ccr4 ENSMUSG00000047898 7 1 - - 1.000 - - - chemokine (C-C motif) receptor 4 [Source:MGI Symbol;Acc:MGI:107824]
99. Gm15302 ENSMUSG00000084377 8 1 - - 1.000 - - - predicted gene 15302 [Source:MGI Symbol;Acc:MGI:3705638]
100. Gm11373 ENSMUSG00000087662 0 1 1.000 - - - - - predicted gene 11373 [Source:MGI Symbol;Acc:MGI:3651828]

There are 296 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA