Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Msh2

Gene Name Gene ID Reads Annotation
Msh2 ENSMUSG00000024151 1663 mutS homolog 2 [Source:MGI Symbol;Acc:MGI:101816]







Genes with expression patterns similar to Msh2

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Msh2 ENSMUSG00000024151 1663 6 1.000 1.000 1.000 1.000 1.000 1.000 mutS homolog 2 [Source:MGI Symbol;Acc:MGI:101816]
2. Alg8 ENSMUSG00000035704 1502 0.854 - 0.854 - - - - asparagine-linked glycosylation 8 (alpha-1,3-glucosyltransferase) [Source:MGI Symbol;Acc:MGI:2141959]
3. Snrnp48 ENSMUSG00000021431 2417 0.824 - 0.824 - - - - small nuclear ribonucleoprotein 48 (U11/U12) [Source:MGI Symbol;Acc:MGI:1915047]
4. Scamp2 ENSMUSG00000040188 1163 0.82 - 0.820 - - - - secretory carrier membrane protein 2 [Source:MGI Symbol;Acc:MGI:1346518]
5. Leprotl1 ENSMUSG00000031513 1832 0.814 - 0.814 - - - - leptin receptor overlapping transcript-like 1 [Source:MGI Symbol;Acc:MGI:1915442]
6. Ccm2 ENSMUSG00000000378 851 0.812 - 0.812 - - - - cerebral cavernous malformation 2 [Source:MGI Symbol;Acc:MGI:2384924]
7. Hexdc ENSMUSG00000039307 420 0.809 - 0.809 - - - - hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing [Source:MGI Symbol;Acc:MGI:3605542]
8. Zfand6 ENSMUSG00000030629 5868 0.807 - 0.807 - - - - zinc finger, AN1-type domain 6 [Source:MGI Symbol;Acc:MGI:1929510]
9. Rnf7 ENSMUSG00000051234 6537 0.806 - 0.806 - - - - ring finger protein 7 [Source:MGI Symbol;Acc:MGI:1337096]
10. Asb7 ENSMUSG00000030509 1675 0.804 - 0.804 - - - - ankyrin repeat and SOCS box-containing 7 [Source:MGI Symbol;Acc:MGI:2152835]
11. Wash Wash 803 0.802 - 0.802 - - - -
12. Ankrd44 ENSMUSG00000052331 984 0.801 - 0.801 - - - - ankyrin repeat domain 44 [Source:MGI Symbol;Acc:MGI:3045243]
13. Mlycd ENSMUSG00000074064 268 0.801 - 0.801 - - - - malonyl-CoA decarboxylase [Source:MGI Symbol;Acc:MGI:1928485]
14. Pabpn1 ENSMUSG00000022194 1359 0.801 - 0.801 - - - - poly(A) binding protein, nuclear 1 [Source:MGI Symbol;Acc:MGI:1859158]
15. Mtmr3 ENSMUSG00000034354 1240 0.8 - 0.800 - - - - myotubularin related protein 3 [Source:MGI Symbol;Acc:MGI:1921552]
16. Bod1l ENSMUSG00000061755 2689 0.8 - 0.800 - - - - biorientation of chromosomes in cell division 1-like [Source:MGI Symbol;Acc:MGI:2444804]
17. Xrn1 ENSMUSG00000032410 667 0.799 - 0.799 - - - - 5'-3' exoribonuclease 1 [Source:MGI Symbol;Acc:MGI:891964]
18. Gm4737 ENSMUSG00000048087 565 0.798 - 0.798 - - - - predicted gene 4737 [Source:MGI Symbol;Acc:MGI:3643647]
19. Trub2 ENSMUSG00000039826 782 0.798 - 0.798 - - - - TruB pseudouridine (psi) synthase family member 2 [Source:MGI Symbol;Acc:MGI:2442186]
20. Ndel1 ENSMUSG00000018736 3400 0.797 - 0.797 - - - - nudE neurodevelopment protein 1 like 1 [Source:MGI Symbol;Acc:MGI:1932915]
21. Gm6807 ENSMUSG00000057605 479 0.797 - 0.797 - - - - predicted gene 6807 [Source:MGI Symbol;Acc:MGI:3649145]
22. Mcu ENSMUSG00000009647 477 0.794 - 0.794 - - - - mitochondrial calcium uniporter [Source:MGI Symbol;Acc:MGI:3026965]
23. Plekhb2 ENSMUSG00000026123 631 0.794 - 0.794 - - - - pleckstrin homology domain containing, family B (evectins) member 2 [Source:MGI Symbol;Acc:MGI:2385825]
24. Smad7 ENSMUSG00000025880 384 0.794 - 0.794 - - - - SMAD family member 7 [Source:MGI Symbol;Acc:MGI:1100518]
25. Agpat1 ENSMUSG00000034254 440 0.794 - 0.794 - - - - 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) [Source:MGI Symbol;Acc:MGI:1932075]
26. Emc1 ENSMUSG00000078517 293 0.794 - 0.794 - - - - ER membrane protein complex subunit 1 [Source:MGI Symbol;Acc:MGI:2443696]
27. Gm11539 ENSMUSG00000083337 746 0.794 - 0.794 - - - - predicted gene 11539 [Source:MGI Symbol;Acc:MGI:3651911]
28. Nsmaf ENSMUSG00000028245 1237 0.793 - 0.793 - - - - neutral sphingomyelinase (N-SMase) activation associated factor [Source:MGI Symbol;Acc:MGI:1341864]
29. Cog2 ENSMUSG00000031979 839 0.793 - 0.793 - - - - component of oligomeric golgi complex 2 [Source:MGI Symbol;Acc:MGI:1923582]
30. Camta2 ENSMUSG00000040712 520 0.79 - 0.790 - - - - calmodulin binding transcription activator 2 [Source:MGI Symbol;Acc:MGI:2135957]
31. Snap23 ENSMUSG00000027287 1315 0.789 - 0.789 - - - - synaptosomal-associated protein 23 [Source:MGI Symbol;Acc:MGI:109356]
32. Ankrd13c ENSMUSG00000039988 429 0.789 - 0.789 - - - - ankyrin repeat domain 13c [Source:MGI Symbol;Acc:MGI:2139746]
33. St3gal6 ENSMUSG00000022747 332 0.789 - 0.789 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:MGI Symbol;Acc:MGI:1888707]
34. Bdh2 ENSMUSG00000028167 314 0.789 - 0.789 - - - - 3-hydroxybutyrate dehydrogenase, type 2 [Source:MGI Symbol;Acc:MGI:1917022]
35. Sirt4 ENSMUSG00000029524 437 0.789 - 0.789 - - - - sirtuin 4 [Source:MGI Symbol;Acc:MGI:1922637]
36. Abhd5 ENSMUSG00000032540 461 0.789 - 0.789 - - - - abhydrolase domain containing 5 [Source:MGI Symbol;Acc:MGI:1914719]
37. Pnpla8 ENSMUSG00000036257 649 0.788 - 0.788 - - - - patatin-like phospholipase domain containing 8 [Source:MGI Symbol;Acc:MGI:1914702]
38. Car5a ENSMUSG00000025317 619 0.788 - 0.788 - - - - carbonic anhydrase 5a, mitochondrial [Source:MGI Symbol;Acc:MGI:101946]
39. Hipk1 ENSMUSG00000008730 2363 0.788 - 0.788 - - - - homeodomain interacting protein kinase 1 [Source:MGI Symbol;Acc:MGI:1314873]
40. Mapk7 ENSMUSG00000001034 2601 0.787 - 0.787 - - - - mitogen-activated protein kinase 7 [Source:MGI Symbol;Acc:MGI:1346347]
41. Alx3 ENSMUSG00000014603 384 0.787 - 0.787 - - - - aristaless-like homeobox 3 [Source:MGI Symbol;Acc:MGI:1277097]
42. Pmm2 ENSMUSG00000022711 580 0.787 - 0.787 - - - - phosphomannomutase 2 [Source:MGI Symbol;Acc:MGI:1859214]
43. Nup43 ENSMUSG00000040034, ENSMUSG00000116037 1278 0.787 - 0.787 - - - - nucleoporin 43 [Source:MGI Symbol;Acc:MGI:1917162]
44. Med22 ENSMUSG00000015776 736 0.786 - 0.786 - - - - mediator complex subunit 22 [Source:MGI Symbol;Acc:MGI:98446]
45. Rnasel ENSMUSG00000066800 396 0.786 - 0.786 - - - - ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) [Source:MGI Symbol;Acc:MGI:1098272]
46. Zfp445 ENSMUSG00000047036 205 0.784 - 0.784 - - - - zinc finger protein 445 [Source:MGI Symbol;Acc:MGI:2143340]
47. Hoxc4 ENSMUSG00000075394 1284 0.783 - 0.783 - - - - homeobox C4 [Source:MGI Symbol;Acc:MGI:96195]
48. Tmem159 ENSMUSG00000030917 409 0.783 - 0.783 - - - - transmembrane protein 159 [Source:MGI Symbol;Acc:MGI:1925752]
49. Elk4 ENSMUSG00000026436 879 0.783 - 0.783 - - - - ELK4, member of ETS oncogene family [Source:MGI Symbol;Acc:MGI:102853]
50. Ccdc132 Ccdc132 1261 0.781 - 0.781 - - - -
51. Ccr5 ENSMUSG00000079227 87 0.781 - 0.781 - - - - chemokine (C-C motif) receptor 5 [Source:MGI Symbol;Acc:MGI:107182]
52. Lman2l ENSMUSG00000001143 1103 0.781 - 0.781 - - - - lectin, mannose-binding 2-like [Source:MGI Symbol;Acc:MGI:2443010]
53. R3hcc1l ENSMUSG00000025184 576 0.781 - 0.781 - - - - R3H domain and coiled-coil containing 1 like [Source:MGI Symbol;Acc:MGI:1196316]
54. Trip10 ENSMUSG00000019487 485 0.781 - 0.781 - - - - thyroid hormone receptor interactor 10 [Source:MGI Symbol;Acc:MGI:2146901]
55. Fam73a 1247 0.781 - 0.781 - - - - family with sequence similarity 73, member A, transcript variant X2
56. Gm13033 ENSMUSG00000083816 71 0.781 - 0.781 - - - - predicted gene 13033 [Source:MGI Symbol;Acc:MGI:3649305]
57. Tcfl5 ENSMUSG00000038932 151 0.78 - 0.780 - - - - transcription factor-like 5 (basic helix-loop-helix) [Source:MGI Symbol;Acc:MGI:2672878]
58. Golph3l ENSMUSG00000046519 687 0.78 - 0.780 - - - - golgi phosphoprotein 3-like [Source:MGI Symbol;Acc:MGI:1917129]
59. Ldoc1l 651 0.778 - 0.778 - - - - leucine zipper, down-regulated in cancer 1-like
60. Atp5d ENSMUSG00000003072 10613 0.778 - 0.778 - - - - ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit [Source:MGI Symbol;Acc:MGI:1913293]
61. Psmd12 ENSMUSG00000020720 2897 0.778 - 0.778 - - - - proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 [Source:MGI Symbol;Acc:MGI:1914247]
62. Lphn1 Lphn1 4184 0.777 - 0.777 - - - -
63. Rep15 ENSMUSG00000040121 131 0.777 - 0.777 - - - - RAB15 effector protein [Source:MGI Symbol;Acc:MGI:1913782]
64. Pld1 ENSMUSG00000027695 229 0.777 - 0.777 - - - - phospholipase D1 [Source:MGI Symbol;Acc:MGI:109585]
65. Gm16287 ENSMUSG00000073739 273 0.775 - 0.775 - - - - predicted gene 16287 [Source:MGI Symbol;Acc:MGI:3650322]
66. Snx5 ENSMUSG00000027423 3464 0.775 - 0.775 - - - - sorting nexin 5 [Source:MGI Symbol;Acc:MGI:1916428]
67. Gucd1 ENSMUSG00000033416 864 0.775 - 0.775 - - - - guanylyl cyclase domain containing 1 [Source:MGI Symbol;Acc:MGI:1916028]
68. Hist1h4i ENSMUSG00000060639 582 0.775 - 0.775 - - - - histone cluster 1, H4i [Source:MGI Symbol;Acc:MGI:2448432]
69. Ficd ENSMUSG00000053334 130 0.774 - 0.774 - - - - FIC domain containing [Source:MGI Symbol;Acc:MGI:1098550]
70. Ctla2b ENSMUSG00000074874 66 0.774 - 0.774 - - - - cytotoxic T lymphocyte-associated protein 2 beta [Source:MGI Symbol;Acc:MGI:88555]
71. Tmem184b ENSMUSG00000009035 927 0.774 - 0.774 - - - - transmembrane protein 184b [Source:MGI Symbol;Acc:MGI:2445179]
72. Wwc1 ENSMUSG00000018849 410 0.774 - 0.774 - - - - WW, C2 and coiled-coil domain containing 1 [Source:MGI Symbol;Acc:MGI:2388637]
73. Gm6415 Gm6415 635 0.773 - 0.773 - - - -
74. Stim1 ENSMUSG00000030987 220 0.773 - 0.773 - - - - stromal interaction molecule 1 [Source:MGI Symbol;Acc:MGI:107476]
75. Afmid ENSMUSG00000017718 252 0.773 - 0.773 - - - - arylformamidase [Source:MGI Symbol;Acc:MGI:2448704]
76. Ntn3 661 0.772 - 0.772 - - - - netrin 3
77. Eif2ak4 ENSMUSG00000005102 763 0.771 - 0.771 - - - - eukaryotic translation initiation factor 2 alpha kinase 4 [Source:MGI Symbol;Acc:MGI:1353427]
78. Nif3l1 ENSMUSG00000026036 1546 0.771 - 0.771 - - - - Ngg1 interacting factor 3-like 1 (S. pombe) [Source:MGI Symbol;Acc:MGI:1929485]
79. Gm13422 ENSMUSG00000084098 313 0.77 - 0.770 - - - - predicted gene 13422 [Source:MGI Symbol;Acc:MGI:3650167]
80. Ucp2 ENSMUSG00000033685 2664 0.77 - 0.770 - - - - uncoupling protein 2 (mitochondrial, proton carrier) [Source:MGI Symbol;Acc:MGI:109354]
81. Cuedc1 ENSMUSG00000018378, ENSMUSG00000098571 849 0.77 - 0.770 - - - - CUE domain containing 1 [Source:MGI Symbol;Acc:MGI:2144281]
82. Mavs ENSMUSG00000037523 581 0.77 - 0.770 - - - - mitochondrial antiviral signaling protein [Source:MGI Symbol;Acc:MGI:2444773]
83. Mbd1 ENSMUSG00000024561 619 0.77 - 0.770 - - - - methyl-CpG binding domain protein 1 [Source:MGI Symbol;Acc:MGI:1333811]
84. Scfd1 ENSMUSG00000020952 1076 0.77 - 0.770 - - - - Sec1 family domain containing 1 [Source:MGI Symbol;Acc:MGI:1924233]
85. Bnip2 ENSMUSG00000011958 2450 0.769 - 0.769 - - - - BCL2/adenovirus E1B interacting protein 2 [Source:MGI Symbol;Acc:MGI:109327]
86. Il10rb ENSMUSG00000022969 176 0.769 - 0.769 - - - - interleukin 10 receptor, beta [Source:MGI Symbol;Acc:MGI:109380]
87. Gm15954 Gm15954 49 0.769 - 0.769 - - - -
88. BC027582 BC027582 61 0.769 - 0.769 - - - -
89. Cgrrf1 ENSMUSG00000055128 994 0.769 - 0.769 - - - - cell growth regulator with ring finger domain 1 [Source:MGI Symbol;Acc:MGI:1916368]
90. Rpusd1 ENSMUSG00000041199 821 0.769 - 0.769 - - - - RNA pseudouridylate synthase domain containing 1 [Source:MGI Symbol;Acc:MGI:1919186]
91. B3gntl1 ENSMUSG00000046605 165 0.769 - 0.769 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 [Source:MGI Symbol;Acc:MGI:2441705]
92. Zfp141 ENSMUSG00000092416 930 0.769 - 0.769 - - - - zinc finger protein 141 [Source:MGI Symbol;Acc:MGI:3584269]
93. Pls1 ENSMUSG00000049493 175 0.769 - 0.769 - - - - plastin 1 (I-isoform) [Source:MGI Symbol;Acc:MGI:104809]
94. Parn ENSMUSG00000022685 568 0.768 - 0.768 - - - - poly(A)-specific ribonuclease (deadenylation nuclease) [Source:MGI Symbol;Acc:MGI:1921358]
95. BC005561 ENSMUSG00000079065 1974 0.768 - 0.768 - - - - cDNA sequence BC005561 [Source:MGI Symbol;Acc:MGI:3040669]
96. Mettl7a3 ENSMUSG00000058057 214 0.768 - 0.768 - - - - methyltransferase like 7A3 [Source:MGI Symbol;Acc:MGI:3710670]
97. Ercc6 ENSMUSG00000054051 674 0.767 - 0.767 - - - - excision repair cross-complementing rodent repair deficiency, complementation group 6 [Source:MGI Symbol;Acc:MGI:1100494]
98. Cdca7l ENSMUSG00000021175 640 0.767 - 0.767 - - - - cell division cycle associated 7 like [Source:MGI Symbol;Acc:MGI:2384982]
99. Mcmdc2 ENSMUSG00000046101 117 0.767 - 0.767 - - - - minichromosome maintenance domain containing 2 [Source:MGI Symbol;Acc:MGI:3045334]
100. Ank1 ENSMUSG00000031543 443 0.767 - 0.767 - - - - ankyrin 1, erythroid [Source:MGI Symbol;Acc:MGI:88024]

There are 132 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA