Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Mir199b

Gene Name Gene ID Reads Annotation
Mir199b ENSMUSG00000092807 4 microRNA 199b [Source:MGI Symbol;Acc:MGI:2676865]







Genes with expression patterns similar to Mir199b

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Mir199b ENSMUSG00000092807 4 3 1.000 - - - 1.000 1.000 microRNA 199b [Source:MGI Symbol;Acc:MGI:2676865]
2. 4631405K08Rik ENSMUSG00000097850 14 1.863 - - - - 1.000 0.863 RIKEN cDNA 4631405K08 gene [Source:MGI Symbol;Acc:MGI:1918050]
3. Loxl4 ENSMUSG00000025185 21 1.735 1.000 - - - - 0.735 lysyl oxidase-like 4 [Source:MGI Symbol;Acc:MGI:1914823]
4. 4930548H24Rik ENSMUSG00000029138 3 1 - - - - 1.000 - RIKEN cDNA 4930548H24 gene [Source:MGI Symbol;Acc:MGI:1914906]
5. Gm7638 ENSMUSG00000080790 1 1 1.000 - - - - - predicted gene 7638 [Source:MGI Symbol;Acc:MGI:3643470]
6. Gm10655 ENSMUSG00000074256 4 1 1.000 - - - - - predicted gene 10655 [Source:MGI Symbol;Acc:MGI:3642575]
7. Gm5883 ENSMUSG00000083713 2 1 - - - - 1.000 - predicted gene 5883 [Source:MGI Symbol;Acc:MGI:3644644]
8. Gdpd3 ENSMUSG00000030703 14 1 - - - - 1.000 - glycerophosphodiester phosphodiesterase domain containing 3 [Source:MGI Symbol;Acc:MGI:1915866]
9. Cd164l2 ENSMUSG00000028865 17 1 1.000 - - - - - CD164 sialomucin-like 2 [Source:MGI Symbol;Acc:MGI:1916905]
10. 4930551O13Rik ENSMUSG00000086430 4 1 1.000 - - - - - RIKEN cDNA 4930551O13 gene [Source:MGI Symbol;Acc:MGI:1922513]
11. Bpifb2 ENSMUSG00000027481 1 1 1.000 - - - - - BPI fold containing family B, member 2 [Source:MGI Symbol;Acc:MGI:1913807]
12. Gm12484 ENSMUSG00000086987 2 1 1.000 - - - - - predicted gene 12484 [Source:MGI Symbol;Acc:MGI:3651626]
13. Gm12867 ENSMUSG00000086683 1 1 - - - - 1.000 - predicted gene 12867 [Source:MGI Symbol;Acc:MGI:3651003]
14. Bmp8a ENSMUSG00000032726 15 1 1.000 - - - - - bone morphogenetic protein 8a [Source:MGI Symbol;Acc:MGI:104515]
15. D130043K22Rik ENSMUSG00000006711 5 1 - - - - 1.000 - RIKEN cDNA D130043K22 gene [Source:MGI Symbol;Acc:MGI:3036268]
16. AW495222 ENSMUSG00000087334 5 1 1.000 - - - - - expressed sequence AW495222 [Source:MGI Symbol;Acc:MGI:2145435]
17. Gm10631 ENSMUSG00000074128 1 1 1.000 - - - - - predicted gene 10631 [Source:MGI Symbol;Acc:MGI:3642022]
18. Gm26711 ENSMUSG00000097904 5 1 1.000 - - - - - predicted gene, 26711 [Source:MGI Symbol;Acc:MGI:5477205]
19. Gm13228 ENSMUSG00000082352 1 1 1.000 - - - - - predicted gene 13228 [Source:MGI Symbol;Acc:MGI:3651932]
20. Gm7148 Gm7148 1 1 - - - - 1.000 -
21. Speer7-ps1 Speer7-ps1 5 1 - - - - 1.000 -
22. 4930524B15Rik ENSMUSG00000020299 8 1 1.000 - - - - - RIKEN cDNA 4930524B15 gene [Source:MGI Symbol;Acc:MGI:1914842]
23. Gm8444 ENSMUSG00000069439 12 1 1.000 - - - - - predicted gene 8444 [Source:MGI Symbol;Acc:MGI:3645809]
24. Tnfsf11 ENSMUSG00000022015 1 1 - - - - 1.000 - tumor necrosis factor (ligand) superfamily, member 11 [Source:MGI Symbol;Acc:MGI:1100089]
25. Gm6890 ENSMUSG00000079532 1 1 - - - - 1.000 - predicted gene 6890 [Source:MGI Symbol;Acc:MGI:3645826]
26. Gm24016 ENSMUSG00000088351 67 1 1.000 - - - - - predicted gene, 24016 [Source:MGI Symbol;Acc:MGI:5453793]
27. Tvp23a ENSMUSG00000050908 4 1 1.000 - - - - - trans-golgi network vesicle protein 23A [Source:MGI Symbol;Acc:MGI:3665441]
28. Plcd4 ENSMUSG00000026173 6 1 1.000 - - - - - phospholipase C, delta 4 [Source:MGI Symbol;Acc:MGI:107469]
29. Ankrd22 ENSMUSG00000024774 4 1 1.000 - - - - - ankyrin repeat domain 22 [Source:MGI Symbol;Acc:MGI:1277101]
30. Gm5244 ENSMUSG00000091014 1 1 1.000 - - - - - predicted pseudogene 5244 [Source:MGI Symbol;Acc:MGI:3646958]
31. Gm15733 ENSMUSG00000086115 1 1 1.000 - - - - - predicted gene 15733 [Source:MGI Symbol;Acc:MGI:3783175]
32. Gm8302 ENSMUSG00000081773 4 1 - - - - 1.000 - predicted gene 8302 [Source:MGI Symbol;Acc:MGI:3643802]
33. 1700003M02Rik 1700003M02Rik 8 1 1.000 - - - - -
34. Olfr885 ENSMUSG00000096424 2 1 - - - - 1.000 - olfactory receptor 885 [Source:MGI Symbol;Acc:MGI:3030719]
35. Gm11572 ENSMUSG00000084368 1 1 1.000 - - - - - predicted gene 11572 [Source:MGI Symbol;Acc:MGI:3649589]
36. Gm2564 ENSMUSG00000091938 1 1 1.000 - - - - - predicted gene 2564 [Source:MGI Symbol;Acc:MGI:3708691]
37. Txndc8 ENSMUSG00000038709 1 1 1.000 - - - - - thioredoxin domain containing 8 [Source:MGI Symbol;Acc:MGI:1914652]
38. Gm14206 ENSMUSG00000086163 2 1 1.000 - - - - - predicted gene 14206 [Source:MGI Symbol;Acc:MGI:3649549]
39. G630030J09Rik ENSMUSG00000097149 6 1 1.000 - - - - - RIKEN cDNA G630030J09 gene [Source:MGI Symbol;Acc:MGI:3045288]
40. mmu-mir-6945 mmu-mir-6945 1 1 - - - - 1.000 -
41. Akap2 ENSMUSG00000038729 3 1 - - - - 1.000 - A kinase (PRKA) anchor protein 2 [Source:MGI Symbol;Acc:MGI:1306795]
42. Tjp3 ENSMUSG00000034917 25 1 1.000 - - - - - tight junction protein 3 [Source:MGI Symbol;Acc:MGI:1351650]
43. Ltb4r1 ENSMUSG00000046908 8 1 - - - - 1.000 - leukotriene B4 receptor 1 [Source:MGI Symbol;Acc:MGI:1309472]
44. 2410080I02Rik ENSMUSG00000044387 3 1 1.000 - - - - - RIKEN cDNA 2410080I02 gene [Source:MGI Symbol;Acc:MGI:1915498]
45. Impdh2 ENSMUSG00000062867 107 1 - - - - 1.000 - inosine monophosphate dehydrogenase 2 [Source:MGI Symbol;Acc:MGI:109367]
46. E230001N04Rik ENSMUSG00000066170 39 1 1.000 - - - - - RIKEN cDNA E230001N04 gene [Source:MGI Symbol;Acc:MGI:2443549]
47. Bfsp2 ENSMUSG00000032556 4 1 - - - - 1.000 - beaded filament structural protein 2, phakinin [Source:MGI Symbol;Acc:MGI:1333828]
48. Gm12703 ENSMUSG00000052767 2 1 - - - - 1.000 - predicted gene 12703 [Source:MGI Symbol;Acc:MGI:3650667]
49. Gm14877 ENSMUSG00000082174 1 1 - - - - 1.000 - predicted gene 14877 [Source:MGI Symbol;Acc:MGI:3708097]
50. Cd3d ENSMUSG00000032094 1 1 1.000 - - - - - CD3 antigen, delta polypeptide [Source:MGI Symbol;Acc:MGI:88331]
51. 6030468B19Rik ENSMUSG00000025573 6 1 1.000 - - - - - RIKEN cDNA 6030468B19 gene [Source:MGI Symbol;Acc:MGI:1924977]
52. Gm26131 ENSMUSG00000064659 2 1 1.000 - - - - - predicted gene, 26131 [Source:MGI Symbol;Acc:MGI:5455908]
53. 4932438H23Rik ENSMUSG00000039851 1 1 - - - - 1.000 - RIKEN cDNA 4932438H23 gene [Source:MGI Symbol;Acc:MGI:1921637]
54. Abca15 ENSMUSG00000054746 3 1 - - - - 1.000 - ATP-binding cassette, sub-family A (ABC1), member 15 [Source:MGI Symbol;Acc:MGI:2388709]
55. Fcgr2b ENSMUSG00000026656 5 1 - - - - 1.000 - Fc receptor, IgG, low affinity IIb [Source:MGI Symbol;Acc:MGI:95499]
56. Gm13539 ENSMUSG00000085484 1 1 1.000 - - - - - predicted gene 13539 [Source:MGI Symbol;Acc:MGI:3651926]
57. H60c ENSMUSG00000091618 3 1 1.000 - - - - - histocompatibility 60c [Source:MGI Symbol;Acc:MGI:3774845]
58. Fam228a ENSMUSG00000079177 14 1 - - - - 1.000 - family with sequence similarity 228, member A [Source:MGI Symbol;Acc:MGI:1922105]
59. Hus1b ENSMUSG00000076430 9 1 1.000 - - - - - HUS1 checkpoint clamp component B [Source:MGI Symbol;Acc:MGI:2671003]
60. Gm26070 ENSMUSG00000088125 2 1 1.000 - - - - - predicted gene, 26070 [Source:MGI Symbol;Acc:MGI:5455847]
61. Gm15659 ENSMUSG00000083242 6 1 - - - - 1.000 - predicted gene 15659 [Source:MGI Symbol;Acc:MGI:3801822]
62. Gm10571 ENSMUSG00000073753 5 0.959 - - - - - 0.959 predicted gene 10571 [Source:MGI Symbol;Acc:MGI:3708701]
63. Wisp3 ENSMUSG00000062074 4 0.959 - - - - - 0.959 WNT1 inducible signaling pathway protein 3 [Source:MGI Symbol;Acc:MGI:2685581]
64. A830005F24Rik ENSMUSG00000053181 54 0.959 0.959 - - - - - RIKEN cDNA A830005F24 gene [Source:MGI Symbol;Acc:MGI:3045249]
65. Gm15013 ENSMUSG00000098559 3 0.959 - - - - - 0.959 predicted gene 15013 [Source:MGI Symbol;Acc:MGI:3644991]
66. Gm26355 ENSMUSG00000088845 5 0.959 - - - - - 0.959 predicted gene, 26355 [Source:MGI Symbol;Acc:MGI:5456132]
67. Gm11351 ENSMUSG00000086531 3 0.959 - - - - - 0.959 predicted gene 11351 [Source:MGI Symbol;Acc:MGI:3649797]
68. Matn4 ENSMUSG00000016995 12 0.959 - - - - - 0.959 matrilin 4 [Source:MGI Symbol;Acc:MGI:1328314]
69. D030018L15Rik ENSMUSG00000078925 11 0.959 - - - - - 0.959 RIKEN cDNA D030018L15 gene [Source:MGI Symbol;Acc:MGI:3028082]
70. Serpina3i ENSMUSG00000079014 3 0.959 - - - - - 0.959 serine (or cysteine) peptidase inhibitor, clade A, member 3I [Source:MGI Symbol;Acc:MGI:2182841]
71. Slc13a1 ENSMUSG00000029700 7 0.959 - - - - - 0.959 solute carrier family 13 (sodium/sulfate symporters), member 1 [Source:MGI Symbol;Acc:MGI:1859937]
72. Gm12541 Gm12541 3 0.959 - - - - - 0.959
73. Gpr25 ENSMUSG00000052759 5 0.959 - - - - - 0.959 G protein-coupled receptor 25 [Source:MGI Symbol;Acc:MGI:2686146]
74. Paqr3 ENSMUSG00000055725 34 0.953 - - - - - 0.953 progestin and adipoQ receptor family member III [Source:MGI Symbol;Acc:MGI:2679683]
75. Gm12089 ENSMUSG00000085165 23 0.946 - - - - - 0.946 predicted gene 12089 [Source:MGI Symbol;Acc:MGI:3650341]
76. Gm12503 ENSMUSG00000087326 4 0.946 0.946 - - - - - predicted gene 12503 [Source:MGI Symbol;Acc:MGI:3651570]
77. Ifi203 ENSMUSG00000039997 17 0.928 - - - - - 0.928 interferon activated gene 203 [Source:MGI Symbol;Acc:MGI:96428]
78. Gm20448 Gm20448 48 0.927 - - - - - 0.927
79. D630032N06Rik D630032N06Rik 10 0.922 0.922 - - - - -
80. Slc2a12 ENSMUSG00000037490 27 0.921 - - - - - 0.921 solute carrier family 2 (facilitated glucose transporter), member 12 [Source:MGI Symbol;Acc:MGI:3052471]
81. Ndst4 ENSMUSG00000027971 56 0.906 - - - - - 0.906 N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4 [Source:MGI Symbol;Acc:MGI:1932545]
82. Lpo ENSMUSG00000009356 8 0.905 - - - - - 0.905 lactoperoxidase [Source:MGI Symbol;Acc:MGI:1923363]
83. Gm15124 ENSMUSG00000085712 23 0.905 0.905 - - - - - predicted gene 15124 [Source:MGI Symbol;Acc:MGI:3705261]
84. Apol10a ENSMUSG00000050982 6 0.903 - - - - - 0.903 apolipoprotein L 10A [Source:MGI Symbol;Acc:MGI:3036238]
85. Nfkbil1 ENSMUSG00000042419 100 0.893 - - - - - 0.893 nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor like 1 [Source:MGI Symbol;Acc:MGI:1340031]
86. Ace ENSMUSG00000020681 11 0.888 - - - - - 0.888 angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 [Source:MGI Symbol;Acc:MGI:87874]
87. Ptprcap ENSMUSG00000045826, ENSMUSG00000097132 54 0.885 - - - - - 0.885 protein tyrosine phosphatase, receptor type, C polypeptide-associated protein [Source:MGI Symbol;Acc:MGI:97811]
88. Fscn2 ENSMUSG00000025380 12 0.883 - - - - - 0.883 fascin actin-bundling protein 2 [Source:MGI Symbol;Acc:MGI:2443337]
89. Tlr2 ENSMUSG00000027995 23 0.883 - - - - - 0.883 toll-like receptor 2 [Source:MGI Symbol;Acc:MGI:1346060]
90. Rpl27a-ps2 ENSMUSG00000058430 65 0.88 - - - - - 0.880 ribosomal protein L27A, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3645381]
91. Rny1 ENSMUSG00000065701 18 0.879 - - - - - 0.879 RNA, Y1 small cytoplasmic, Ro-associated [Source:MGI Symbol;Acc:MGI:97995]
92. Hopx ENSMUSG00000059325 75 0.878 0.878 - - - - - HOP homeobox [Source:MGI Symbol;Acc:MGI:1916782]
93. H2-T22 ENSMUSG00000056116 94 0.877 - - - - - 0.877 histocompatibility 2, T region locus 22 [Source:MGI Symbol;Acc:MGI:95956]
94. Mboat4 ENSMUSG00000071113 9 0.875 0.875 - - - - - membrane bound O-acyltransferase domain containing 4 [Source:MGI Symbol;Acc:MGI:2685017]
95. Gm15614 ENSMUSG00000085234 36 0.871 - - - - - 0.871 predicted gene 15614 [Source:MGI Symbol;Acc:MGI:3783059]
96. Tnni3 ENSMUSG00000035458 55 0.87 - - - - - 0.870 troponin I, cardiac 3 [Source:MGI Symbol;Acc:MGI:98783]
97. Pdzd7 ENSMUSG00000074818 11 0.869 - - - - 0.869 - PDZ domain containing 7 [Source:MGI Symbol;Acc:MGI:3608325]
98. Mina 6 0.843 - - - - 0.843 - myc induced nuclear antigen, transcript variant X2
99. Tgfa ENSMUSG00000029999 19 0.843 - - - - - 0.843 transforming growth factor alpha [Source:MGI Symbol;Acc:MGI:98724]
100. Gimap5 ENSMUSG00000043505 23 0.842 - - - - - 0.842 GTPase, IMAP family member 5 [Source:MGI Symbol;Acc:MGI:2442232]

There are 69 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA