Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Lsm6

Gene Name Gene ID Reads Annotation
Lsm6 ENSMUSG00000031683 5930 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:MGI Symbol;Acc:MGI:1925901]







Genes with expression patterns similar to Lsm6

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Lsm6 ENSMUSG00000031683 5930 6 1.000 1.000 1.000 1.000 1.000 1.000 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:MGI Symbol;Acc:MGI:1925901]
2. Tceb1 5581 0.841 0.841 - - - - - transcription elongation factor B (SIII), polypeptide 1, transcript variant X4
3. Mcrs1 ENSMUSG00000037570 4621 0.818 0.818 - - - - - microspherule protein 1 [Source:MGI Symbol;Acc:MGI:1858420]
4. Nudcd2 ENSMUSG00000020328 7198 0.795 0.795 - - - - - NudC domain containing 2 [Source:MGI Symbol;Acc:MGI:1277103]
5. Csk ENSMUSG00000032312 9316 0.791 0.791 - - - - - c-src tyrosine kinase [Source:MGI Symbol;Acc:MGI:88537]
6. Taok2 ENSMUSG00000059981 3667 0.785 0.785 - - - - - TAO kinase 2 [Source:MGI Symbol;Acc:MGI:1915919]
7. Psmd1 ENSMUSG00000026229 7421 0.777 0.777 - - - - - proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 [Source:MGI Symbol;Acc:MGI:1917497]
8. Lpin2 ENSMUSG00000024052 2389 0.773 0.773 - - - - - lipin 2 [Source:MGI Symbol;Acc:MGI:1891341]
9. Rab7 ENSMUSG00000079477 4726 0.76 - 0.760 - - - - RAB7, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:105068]
10. Noa1 ENSMUSG00000036285 1081 0.754 0.754 - - - - - nitric oxide associated 1 [Source:MGI Symbol;Acc:MGI:1914306]
11. Ndufs1 ENSMUSG00000025968 9118 0.751 - 0.751 - - - - NADH:ubiquinone oxidoreductase core subunit S1 [Source:MGI Symbol;Acc:MGI:2443241]
12. Vps35 ENSMUSG00000031696 8393 0.75 0.750 - - - - - VPS35 retromer complex component [Source:MGI Symbol;Acc:MGI:1890467]
13. Zmiz2 ENSMUSG00000041164 4327 0.749 - 0.749 - - - - zinc finger, MIZ-type containing 2 [Source:MGI Symbol;Acc:MGI:106374]
14. Rps24 ENSMUSG00000025290 10541 0.748 - 0.748 - - - - ribosomal protein S24 [Source:MGI Symbol;Acc:MGI:98147]
15. Srm ENSMUSG00000006442 7421 0.746 - 0.746 - - - - spermidine synthase [Source:MGI Symbol;Acc:MGI:102690]
16. Gtf3c2 ENSMUSG00000106864 5199 0.746 0.746 - - - - - general transcription factor IIIC, polypeptide 2, beta [Source:MGI Symbol;Acc:MGI:1919002]
17. Nbn ENSMUSG00000028224 1101 0.744 0.744 - - - - - nibrin [Source:MGI Symbol;Acc:MGI:1351625]
18. Pisd ENSMUSG00000023452 1396 0.744 0.744 - - - - - phosphatidylserine decarboxylase [Source:MGI Symbol;Acc:MGI:2445114]
19. Otud6b ENSMUSG00000040550 2422 0.739 0.739 - - - - - OTU domain containing 6B [Source:MGI Symbol;Acc:MGI:1919451]
20. Slc39a10 ENSMUSG00000025986 4445 0.738 0.738 - - - - - solute carrier family 39 (zinc transporter), member 10 [Source:MGI Symbol;Acc:MGI:1914515]
21. Rhot2 ENSMUSG00000025733 4702 0.735 0.735 - - - - - ras homolog family member T2 [Source:MGI Symbol;Acc:MGI:2384892]
22. Psma5 ENSMUSG00000068749 4310 0.734 0.734 - - - - - proteasome (prosome, macropain) subunit, alpha type 5 [Source:MGI Symbol;Acc:MGI:1347009]
23. Zc3h4 ENSMUSG00000059273 5818 0.734 - 0.734 - - - - zinc finger CCCH-type containing 4 [Source:MGI Symbol;Acc:MGI:2682314]
24. Mki67ip Mki67ip 2146 0.732 0.732 - - - - -
25. Cs ENSMUSG00000005683 7865 0.729 0.729 - - - - - citrate synthase [Source:MGI Symbol;Acc:MGI:88529]
26. Tns1 ENSMUSG00000055322 2459 0.729 0.729 - - - - - tensin 1 [Source:MGI Symbol;Acc:MGI:104552]
27. Agtrap ENSMUSG00000029007 763 0.728 0.728 - - - - - angiotensin II, type I receptor-associated protein [Source:MGI Symbol;Acc:MGI:1339977]
28. Trappc6b ENSMUSG00000020993 2507 0.727 - 0.727 - - - - trafficking protein particle complex 6B [Source:MGI Symbol;Acc:MGI:1925482]
29. Gm6368 ENSMUSG00000080775 1795 0.726 0.726 - - - - - predicted gene 6368 [Source:MGI Symbol;Acc:MGI:3644537]
30. Cmc2 ENSMUSG00000014633 1791 0.725 - - 0.725 - - - COX assembly mitochondrial protein 2 [Source:MGI Symbol;Acc:MGI:1913781]
31. Rfc1 ENSMUSG00000029191 4343 0.725 0.725 - - - - - replication factor C (activator 1) 1 [Source:MGI Symbol;Acc:MGI:97891]
32. Rbbp6 ENSMUSG00000030779 8007 0.725 - 0.725 - - - - retinoblastoma binding protein 6, ubiquitin ligase [Source:MGI Symbol;Acc:MGI:894835]
33. Timm17a ENSMUSG00000062580 2381 0.724 0.724 - - - - - translocase of inner mitochondrial membrane 17a [Source:MGI Symbol;Acc:MGI:1343131]
34. Fnta ENSMUSG00000015994 2803 0.723 0.723 - - - - - farnesyltransferase, CAAX box, alpha [Source:MGI Symbol;Acc:MGI:104683]
35. Trit1 ENSMUSG00000028653 603 0.722 0.722 - - - - - tRNA isopentenyltransferase 1 [Source:MGI Symbol;Acc:MGI:1914216]
36. Qser1 ENSMUSG00000074994 3293 0.722 - 0.722 - - - - glutamine and serine rich 1 [Source:MGI Symbol;Acc:MGI:2138986]
37. Tmem14c ENSMUSG00000021361 2424 0.721 0.721 - - - - - transmembrane protein 14C [Source:MGI Symbol;Acc:MGI:1913404]
38. Psmc6 ENSMUSG00000021832 6238 0.721 0.721 - - - - - proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Source:MGI Symbol;Acc:MGI:1914339]
39. Trim37 ENSMUSG00000018548 2097 0.719 0.719 - - - - - tripartite motif-containing 37 [Source:MGI Symbol;Acc:MGI:2153072]
40. Knop1 ENSMUSG00000030980 2926 0.719 0.719 - - - - - lysine rich nucleolar protein 1 [Source:MGI Symbol;Acc:MGI:1913606]
41. Mad1l1 ENSMUSG00000029554 2282 0.716 0.716 - - - - - MAD1 mitotic arrest deficient 1-like 1 [Source:MGI Symbol;Acc:MGI:1341857]
42. Abr ENSMUSG00000017631 1461 0.716 0.716 - - - - - active BCR-related gene [Source:MGI Symbol;Acc:MGI:107771]
43. Tmed7 ENSMUSG00000033184 2427 0.715 0.715 - - - - - transmembrane p24 trafficking protein 7 [Source:MGI Symbol;Acc:MGI:1913926]
44. Ipo9 ENSMUSG00000041879 7282 0.713 - 0.713 - - - - importin 9 [Source:MGI Symbol;Acc:MGI:1918944]
45. Drg1 ENSMUSG00000020457 2996 0.712 0.712 - - - - - developmentally regulated GTP binding protein 1 [Source:MGI Symbol;Acc:MGI:1343297]
46. Atg12 ENSMUSG00000032905 4891 0.712 0.712 - - - - - autophagy related 12 [Source:MGI Symbol;Acc:MGI:1914776]
47. Wdr5 ENSMUSG00000026917 4722 0.712 - 0.712 - - - - WD repeat domain 5 [Source:MGI Symbol;Acc:MGI:2155884]
48. Tagap1 ENSMUSG00000052031 1290 0.711 0.711 - - - - - T cell activation GTPase activating protein 1 [Source:MGI Symbol;Acc:MGI:1919786]
49. Ugcg ENSMUSG00000028381 2096 0.711 0.711 - - - - - UDP-glucose ceramide glucosyltransferase [Source:MGI Symbol;Acc:MGI:1332243]
50. Ube3b ENSMUSG00000029577 2499 0.71 0.710 - - - - - ubiquitin protein ligase E3B [Source:MGI Symbol;Acc:MGI:1891295]
51. Abcf2 ENSMUSG00000028953 2070 0.709 0.709 - - - - - ATP-binding cassette, sub-family F (GCN20), member 2 [Source:MGI Symbol;Acc:MGI:1351657]
52. Manf ENSMUSG00000032575 6450 0.709 0.709 - - - - - mesencephalic astrocyte-derived neurotrophic factor [Source:MGI Symbol;Acc:MGI:1922090]
53. Cript ENSMUSG00000024146 2236 0.708 0.708 - - - - - cysteine-rich PDZ-binding protein [Source:MGI Symbol;Acc:MGI:1929655]
54. Cdc37 ENSMUSG00000019471 6483 0.708 - 0.708 - - - - cell division cycle 37 [Source:MGI Symbol;Acc:MGI:109531]
55. Cdc42se1 ENSMUSG00000046722 1904 0.707 0.707 - - - - - CDC42 small effector 1 [Source:MGI Symbol;Acc:MGI:1889510]
56. Sin3b ENSMUSG00000031622 3192 0.706 0.706 - - - - - transcriptional regulator, SIN3B (yeast) [Source:MGI Symbol;Acc:MGI:107158]
57. Atpaf1 ENSMUSG00000028710 2462 0.706 0.706 - - - - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:MGI Symbol;Acc:MGI:2180560]
58. Pecam1 ENSMUSG00000020717 1814 0.706 0.706 - - - - - platelet/endothelial cell adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:97537]
59. Zfp106 ENSMUSG00000027288 2359 0.705 0.705 - - - - - zinc finger protein 106 [Source:MGI Symbol;Acc:MGI:1270153]
60. Ddah1 ENSMUSG00000028194 2241 0.703 0.703 - - - - - dimethylarginine dimethylaminohydrolase 1 [Source:MGI Symbol;Acc:MGI:1916469]
61. Limch1 ENSMUSG00000037736 2425 0.703 0.703 - - - - - LIM and calponin homology domains 1 [Source:MGI Symbol;Acc:MGI:1924819]
62. Anp32e ENSMUSG00000015749 13671 0.702 - 0.702 - - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:MGI Symbol;Acc:MGI:1913721]
63. Wrb ENSMUSG00000023147 2544 0.702 0.702 - - - - - tryptophan rich basic protein [Source:MGI Symbol;Acc:MGI:2136882]
64. Pola1 ENSMUSG00000006678 2806 0.702 0.702 - - - - - polymerase (DNA directed), alpha 1 [Source:MGI Symbol;Acc:MGI:99660]
65. Ckap4 ENSMUSG00000046841 8611 0.701 0.701 - - - - - cytoskeleton-associated protein 4 [Source:MGI Symbol;Acc:MGI:2444926]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA