Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Lrp1

Gene Name Gene ID Reads Annotation
Lrp1 ENSMUSG00000040249 1845 low density lipoprotein receptor-related protein 1 [Source:MGI Symbol;Acc:MGI:96828]







Genes with expression patterns similar to Lrp1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Lrp1 ENSMUSG00000040249 1845 6 1.000 1.000 1.000 1.000 1.000 1.000 low density lipoprotein receptor-related protein 1 [Source:MGI Symbol;Acc:MGI:96828]
2. Phf12 ENSMUSG00000037791 554 1.487 - 0.707 - - - 0.780 PHD finger protein 12 [Source:MGI Symbol;Acc:MGI:1924057]
3. Mtmr3 ENSMUSG00000034354 1240 1.486 - 0.744 - - - 0.742 myotubularin related protein 3 [Source:MGI Symbol;Acc:MGI:1921552]
4. Ipo4 ENSMUSG00000002319 1588 1.484 - 0.733 - - - 0.751 importin 4 [Source:MGI Symbol;Acc:MGI:1923001]
5. Mpp1 ENSMUSG00000031402 1112 1.436 - 0.720 - - - 0.716 membrane protein, palmitoylated [Source:MGI Symbol;Acc:MGI:105941]
6. Krt7 ENSMUSG00000023039 391 0.908 - - - - - 0.908 keratin 7 [Source:MGI Symbol;Acc:MGI:96704]
7. Sfn ENSMUSG00000047281 305 0.904 - - - - - 0.904 stratifin [Source:MGI Symbol;Acc:MGI:1891831]
8. Fubp3 ENSMUSG00000026843 2442 0.894 - - - - - 0.894 far upstream element (FUSE) binding protein 3 [Source:MGI Symbol;Acc:MGI:2443699]
9. Dip2b ENSMUSG00000023026 1742 0.882 - - - - - 0.882 disco interacting protein 2 homolog B [Source:MGI Symbol;Acc:MGI:2145977]
10. Alcam ENSMUSG00000022636 2190 0.882 - - - - - 0.882 activated leukocyte cell adhesion molecule [Source:MGI Symbol;Acc:MGI:1313266]
11. Hmmr ENSMUSG00000020330 2775 0.876 - - - - - 0.876 hyaluronan mediated motility receptor (RHAMM) [Source:MGI Symbol;Acc:MGI:104667]
12. BC005624 ENSMUSG00000026851 1591 0.872 - - - - - 0.872 cDNA sequence BC005624 [Source:MGI Symbol;Acc:MGI:2385132]
13. Pdcd2 ENSMUSG00000014771 871 0.869 - - - - - 0.869 programmed cell death 2 [Source:MGI Symbol;Acc:MGI:104643]
14. Zfp513 ENSMUSG00000043059 2452 0.865 - - - - - 0.865 zinc finger protein 513 [Source:MGI Symbol;Acc:MGI:2141255]
15. Kti12 ENSMUSG00000073775 1671 0.863 - - - - - 0.863 KTI12 homolog, chromatin associated [Source:MGI Symbol;Acc:MGI:1923547]
16. Dock1 ENSMUSG00000058325 2924 0.853 - - - - - 0.853 dedicator of cytokinesis 1 [Source:MGI Symbol;Acc:MGI:2429765]
17. 2810004N23Rik ENSMUSG00000031984 3681 0.851 - - - - - 0.851 RIKEN cDNA 2810004N23 gene [Source:MGI Symbol;Acc:MGI:1913773]
18. Ptdss1 ENSMUSG00000021518 4429 0.849 - - - - - 0.849 phosphatidylserine synthase 1 [Source:MGI Symbol;Acc:MGI:1276575]
19. Ubr7 ENSMUSG00000041712 2341 0.845 - - - - - 0.845 ubiquitin protein ligase E3 component n-recognin 7 (putative) [Source:MGI Symbol;Acc:MGI:1913872]
20. Ethe1 ENSMUSG00000064254 1274 0.844 - - - - - 0.844 ethylmalonic encephalopathy 1 [Source:MGI Symbol;Acc:MGI:1913321]
21. Gm13826 Gm13826 2764 0.843 - - - - - 0.843
22. G6pdx ENSMUSG00000031400 2910 0.837 - - - - - 0.837 glucose-6-phosphate dehydrogenase X-linked [Source:MGI Symbol;Acc:MGI:105979]
23. Tmem248 ENSMUSG00000053094 2906 0.832 - - - - - 0.832 transmembrane protein 248 [Source:MGI Symbol;Acc:MGI:1918917]
24. Slc2a3 ENSMUSG00000003153 5785 0.831 - - - - - 0.831 solute carrier family 2 (facilitated glucose transporter), member 3 [Source:MGI Symbol;Acc:MGI:95757]
25. Ptrh2 ENSMUSG00000072582 2059 0.829 - - - - - 0.829 peptidyl-tRNA hydrolase 2 [Source:MGI Symbol;Acc:MGI:2444848]
26. Zfp516 ENSMUSG00000058881 4181 0.826 - - - - - 0.826 zinc finger protein 516 [Source:MGI Symbol;Acc:MGI:2443957]
27. Usf2 ENSMUSG00000058239 5270 0.826 - - - - - 0.826 upstream transcription factor 2 [Source:MGI Symbol;Acc:MGI:99961]
28. Poldip3 ENSMUSG00000041815 3594 0.826 - - - - - 0.826 polymerase (DNA-directed), delta interacting protein 3 [Source:MGI Symbol;Acc:MGI:1921076]
29. Tpi1 ENSMUSG00000023456 10979 0.821 - - - - - 0.821 triosephosphate isomerase 1 [Source:MGI Symbol;Acc:MGI:98797]
30. Fermt2 ENSMUSG00000037712 2474 0.821 - - - - - 0.821 fermitin family member 2 [Source:MGI Symbol;Acc:MGI:2385001]
31. Clpb ENSMUSG00000001829 1855 0.814 - - - - - 0.814 ClpB caseinolytic peptidase B [Source:MGI Symbol;Acc:MGI:1100517]
32. Rab1b ENSMUSG00000024870 4174 0.812 - - - - - 0.812 RAB1B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1923558]
33. Cdc25a ENSMUSG00000032477 3539 0.811 - - - - - 0.811 cell division cycle 25A [Source:MGI Symbol;Acc:MGI:103198]
34. Aimp1 ENSMUSG00000028029 2696 0.809 - - - - - 0.809 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:MGI Symbol;Acc:MGI:102774]
35. Asb7 ENSMUSG00000030509 1675 0.806 - 0.806 - - - - ankyrin repeat and SOCS box-containing 7 [Source:MGI Symbol;Acc:MGI:2152835]
36. Taf4a Taf4a 2077 0.805 - - - - - 0.805
37. Ralgapa2 ENSMUSG00000037110 471 0.802 - 0.802 - - - - Ral GTPase activating protein, alpha subunit 2 (catalytic) [Source:MGI Symbol;Acc:MGI:3036245]
38. Hs6st1 ENSMUSG00000045216 2389 0.802 - - - - - 0.802 heparan sulfate 6-O-sulfotransferase 1 [Source:MGI Symbol;Acc:MGI:1354958]
39. Gm13476 Gm13476 165 0.801 - - - - - 0.801
40. Ipo9 ENSMUSG00000041879 7282 0.8 - - - - - 0.800 importin 9 [Source:MGI Symbol;Acc:MGI:1918944]
41. Ufc1 ENSMUSG00000062963 2274 0.798 - - - - - 0.798 ubiquitin-fold modifier conjugating enzyme 1 [Source:MGI Symbol;Acc:MGI:1913405]
42. Ndufv3 ENSMUSG00000024038 4549 0.797 - - - - - 0.797 NADH:ubiquinone oxidoreductase core subunit V3 [Source:MGI Symbol;Acc:MGI:1890894]
43. Atp6ap2 ENSMUSG00000031007 2494 0.796 - - - - - 0.796 ATPase, H+ transporting, lysosomal accessory protein 2 [Source:MGI Symbol;Acc:MGI:1917745]
44. Ppt2 ENSMUSG00000015474 321 0.796 - - - - - 0.796 palmitoyl-protein thioesterase 2 [Source:MGI Symbol;Acc:MGI:1860075]
45. Gm10307 ENSMUSG00000101093 159 0.794 - - - - - 0.794 predicted gene 10307 [Source:MGI Symbol;Acc:MGI:3642371]
46. Gm24451 ENSMUSG00000065287 57 0.794 - - - - - 0.794 predicted gene, 24451 [Source:MGI Symbol;Acc:MGI:5454228]
47. Gm13910 ENSMUSG00000063684 126 0.793 - - - - - 0.793 predicted gene 13910 [Source:MGI Symbol;Acc:MGI:3651143]
48. Fam104a ENSMUSG00000041629 2898 0.793 - - - - - 0.793 family with sequence similarity 104, member A [Source:MGI Symbol;Acc:MGI:106351]
49. Bcr ENSMUSG00000009681 588 0.793 - - - - - 0.793 breakpoint cluster region [Source:MGI Symbol;Acc:MGI:88141]
50. Sh3rf2 ENSMUSG00000057719 60 0.793 - - - - - 0.793 SH3 domain containing ring finger 2 [Source:MGI Symbol;Acc:MGI:2444628]
51. Phf19 ENSMUSG00000026873 83 0.792 - - - - - 0.792 PHD finger protein 19 [Source:MGI Symbol;Acc:MGI:1921266]
52. Gm14286 ENSMUSG00000087445 166 0.792 - - - - - 0.792 predicted gene 14286 [Source:MGI Symbol;Acc:MGI:3650190]
53. Trdmt1 ENSMUSG00000026723 391 0.791 - - - - - 0.791 tRNA aspartic acid methyltransferase 1 [Source:MGI Symbol;Acc:MGI:1274787]
54. Hes3 ENSMUSG00000028946 73 0.79 - - - - - 0.790 hes family bHLH transcription factor 3 [Source:MGI Symbol;Acc:MGI:104877]
55. Il17d ENSMUSG00000050222 119 0.79 - - - - - 0.790 interleukin 17D [Source:MGI Symbol;Acc:MGI:2446510]
56. Ostm1 ENSMUSG00000038280 208 0.79 - - - - - 0.790 osteopetrosis associated transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:2655574]
57. Wipi1 ENSMUSG00000041895 3789 0.79 - - - - - 0.790 WD repeat domain, phosphoinositide interacting 1 [Source:MGI Symbol;Acc:MGI:1261864]
58. Atp6ap1 ENSMUSG00000019087 614 0.789 - - - - - 0.789 ATPase, H+ transporting, lysosomal accessory protein 1 [Source:MGI Symbol;Acc:MGI:109629]
59. Ftx ENSMUSG00000086370 285 0.789 - - - - - 0.789 Ftx transcript, Xist regulator (non-protein coding) [Source:MGI Symbol;Acc:MGI:1926128]
60. Htr1b ENSMUSG00000049511 77 0.789 - - - - - 0.789 5-hydroxytryptamine (serotonin) receptor 1B [Source:MGI Symbol;Acc:MGI:96274]
61. Lamp2 ENSMUSG00000016534 3440 0.789 - - - - - 0.789 lysosomal-associated membrane protein 2 [Source:MGI Symbol;Acc:MGI:96748]
62. Fam131a ENSMUSG00000050821 113 0.789 - - - - - 0.789 family with sequence similarity 131, member A [Source:MGI Symbol;Acc:MGI:1925658]
63. Dtd1 ENSMUSG00000027430 447 0.788 - - - - - 0.788 D-tyrosyl-tRNA deacylase 1 [Source:MGI Symbol;Acc:MGI:1913294]
64. Asb3 ENSMUSG00000020305 1979 0.788 - - - - - 0.788 ankyrin repeat and SOCS box-containing 3 [Source:MGI Symbol;Acc:MGI:1929749]
65. Ufsp1 ENSMUSG00000051502 251 0.788 - - - - - 0.788 UFM1-specific peptidase 1 [Source:MGI Symbol;Acc:MGI:1917490]
66. Axin2 ENSMUSG00000000142 1253 0.786 - - - - - 0.786 axin 2 [Source:MGI Symbol;Acc:MGI:1270862]
67. Dfna5 492 0.786 - - - - - 0.786 deafness, autosomal dominant 5 (human), transcript variant X3
68. Stbd1 ENSMUSG00000047963 377 0.785 - - - - - 0.785 starch binding domain 1 [Source:MGI Symbol;Acc:MGI:1261768]
69. 2310015A10Rik ENSMUSG00000097729 199 0.784 - - - - - 0.784 RIKEN cDNA 2310015A10 gene [Source:MGI Symbol;Acc:MGI:1916798]
70. Gpr125 Gpr125 4276 0.784 - - - - - 0.784
71. 9130023H24Rik ENSMUSG00000062944 258 0.784 - - - - - 0.784 RIKEN cDNA 9130023H24 gene [Source:MGI Symbol;Acc:MGI:2442738]
72. Cish ENSMUSG00000032578 239 0.783 - - - - - 0.783 cytokine inducible SH2-containing protein [Source:MGI Symbol;Acc:MGI:103159]
73. Alkbh4 ENSMUSG00000039754 367 0.782 - - - - - 0.782 alkB homolog 4, lysine demethylase [Source:MGI Symbol;Acc:MGI:1919291]
74. Zzef1 ENSMUSG00000055670 953 0.781 - - - - - 0.781 zinc finger, ZZ-type with EF hand domain 1 [Source:MGI Symbol;Acc:MGI:2444286]
75. Paxbp1 ENSMUSG00000022974 322 0.781 - - - - - 0.781 PAX3 and PAX7 binding protein 1 [Source:MGI Symbol;Acc:MGI:1914617]
76. Aspscr1 ENSMUSG00000025142 694 0.779 - - - - - 0.779 alveolar soft part sarcoma chromosome region, candidate 1 (human) [Source:MGI Symbol;Acc:MGI:1916188]
77. Hddc3 ENSMUSG00000030532 213 0.779 - - - - - 0.779 HD domain containing 3 [Source:MGI Symbol;Acc:MGI:1915945]
78. Mbd1 ENSMUSG00000024561 619 0.778 - - - - - 0.778 methyl-CpG binding domain protein 1 [Source:MGI Symbol;Acc:MGI:1333811]
79. BC026585 1005 0.777 - - - - - 0.777 cDNA sequence BC026585, transcript variant X1
80. Lgr5 ENSMUSG00000020140 516 0.777 - - - - - 0.777 leucine rich repeat containing G protein coupled receptor 5 [Source:MGI Symbol;Acc:MGI:1341817]
81. Zfand6 ENSMUSG00000030629 5868 0.777 - 0.777 - - - - zinc finger, AN1-type domain 6 [Source:MGI Symbol;Acc:MGI:1929510]
82. Acsl6 ENSMUSG00000020333 249 0.776 - - - - - 0.776 acyl-CoA synthetase long-chain family member 6 [Source:MGI Symbol;Acc:MGI:894291]
83. Mcm8 ENSMUSG00000027353 1598 0.776 - - - - - 0.776 minichromosome maintenance 8 homologous recombination repair factor [Source:MGI Symbol;Acc:MGI:1913884]
84. Blmh ENSMUSG00000020840 2762 0.776 - - - - - 0.776 bleomycin hydrolase [Source:MGI Symbol;Acc:MGI:1345186]
85. Gm6807 ENSMUSG00000057605 479 0.776 - 0.776 - - - - predicted gene 6807 [Source:MGI Symbol;Acc:MGI:3649145]
86. Ninl ENSMUSG00000068115 1268 0.775 - - - - - 0.775 ninein-like [Source:MGI Symbol;Acc:MGI:1925427]
87. Hbb-bs ENSMUSG00000052305 2551 0.775 - - - - - 0.775 hemoglobin, beta adult s chain [Source:MGI Symbol;Acc:MGI:5474852]
88. Leo1 ENSMUSG00000042487 811 0.775 - 0.775 - - - - Leo1, Paf1/RNA polymerase II complex component [Source:MGI Symbol;Acc:MGI:2685031]
89. Snrnp48 ENSMUSG00000021431 2417 0.774 - 0.774 - - - - small nuclear ribonucleoprotein 48 (U11/U12) [Source:MGI Symbol;Acc:MGI:1915047]
90. Amd1 ENSMUSG00000075232 1041 0.774 - - - - - 0.774 S-adenosylmethionine decarboxylase 1 [Source:MGI Symbol;Acc:MGI:88004]
91. Flii ENSMUSG00000002812 1382 0.773 - 0.773 - - - - flightless I actin binding protein [Source:MGI Symbol;Acc:MGI:1342286]
92. Snrpb ENSMUSG00000027404 20831 0.773 - - - - - 0.773 small nuclear ribonucleoprotein B [Source:MGI Symbol;Acc:MGI:98342]
93. Gm21833 ENSMUSG00000094030 652 0.773 - - - - - 0.773 predicted gene, 21833 [Source:MGI Symbol;Acc:MGI:5433997]
94. Unc45a ENSMUSG00000030533 852 0.773 - - - - - 0.773 unc-45 myosin chaperone A [Source:MGI Symbol;Acc:MGI:2142246]
95. Rad51ap1 ENSMUSG00000030346 1698 0.772 - - - - - 0.772 RAD51 associated protein 1 [Source:MGI Symbol;Acc:MGI:1098224]
96. Atp8a1 ENSMUSG00000037685 1155 0.772 - - - - - 0.772 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 [Source:MGI Symbol;Acc:MGI:1330848]
97. Pcdha2 ENSMUSG00000104148 246 0.772 - - - - - 0.772 protocadherin alpha 2 [Source:MGI Symbol;Acc:MGI:2681880]
98. Lhpp ENSMUSG00000030946 365 0.771 - - - - - 0.771 phospholysine phosphohistidine inorganic pyrophosphate phosphatase [Source:MGI Symbol;Acc:MGI:1923679]
99. Gm15545 ENSMUSG00000087138 252 0.77 - - - - - 0.770 predicted gene 15545 [Source:MGI Symbol;Acc:MGI:3782994]
100. Bod1l ENSMUSG00000061755 2689 0.77 - 0.770 - - - - biorientation of chromosomes in cell division 1-like [Source:MGI Symbol;Acc:MGI:2444804]

There are 209 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA