Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Htr3a

Gene Name Gene ID Reads Annotation
Htr3a ENSMUSG00000032269 11 5-hydroxytryptamine (serotonin) receptor 3A [Source:MGI Symbol;Acc:MGI:96282]







Genes with expression patterns similar to Htr3a

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Htr3a ENSMUSG00000032269 11 6 1.000 1.000 1.000 1.000 1.000 1.000 5-hydroxytryptamine (serotonin) receptor 3A [Source:MGI Symbol;Acc:MGI:96282]
2. Gm26573 ENSMUSG00000096958, ENSMUSG00000116495 21 1.891 - 0.891 1.000 - - - predicted gene, 26573 [Source:MGI Symbol;Acc:MGI:5477067]
3. Gm12226 ENSMUSG00000078151 7 1.588 0.852 - 0.736 - - - predicted pseudogene 12226 [Source:MGI Symbol;Acc:MGI:3649742]
4. Sh2d1b2 ENSMUSG00000073494 1 1 - 1.000 - - - - SH2 domain containing 1B2 [Source:MGI Symbol;Acc:MGI:3622649]
5. Gm5580 ENSMUSG00000107906 10 1 - 1.000 - - - - predicted pseudogene 5580 [Source:MGI Symbol;Acc:MGI:3646594]
6. Gm16316 ENSMUSG00000087129 5 1 - 1.000 - - - - predicted gene 16316 [Source:MGI Symbol;Acc:MGI:3826530]
7. Gm13712 ENSMUSG00000082534 14 1 - 1.000 - - - - predicted gene 13712 [Source:MGI Symbol;Acc:MGI:3650489]
8. Gm12463 ENSMUSG00000080916 11 1 - 1.000 - - - - predicted gene 12463 [Source:MGI Symbol;Acc:MGI:3650648]
9. Noto ENSMUSG00000068302 0 1 - - 1.000 - - - notochord homeobox [Source:MGI Symbol;Acc:MGI:3053002]
10. Rsph4a ENSMUSG00000039552 3 1 - 1.000 - - - - radial spoke head 4 homolog A (Chlamydomonas) [Source:MGI Symbol;Acc:MGI:3027894]
11. Gm13110 ENSMUSG00000086810 1 1 - - 1.000 - - - predicted gene 13110 [Source:MGI Symbol;Acc:MGI:3651716]
12. A730071L15Rik ENSMUSG00000096923 22 1 - - 1.000 - - - RIKEN cDNA A730071L15Rik gene [Source:MGI Symbol;Acc:MGI:3642498]
13. Gm14812 ENSMUSG00000073051 1 1 - - 1.000 - - - predicted gene 14812 [Source:MGI Symbol;Acc:MGI:3642165]
14. Nodal ENSMUSG00000037171 6 1 - - 1.000 - - - nodal [Source:MGI Symbol;Acc:MGI:97359]
15. Gm16302 ENSMUSG00000090023 8 1 - 1.000 - - - - predicted gene 16302 [Source:MGI Symbol;Acc:MGI:3826572]
16. 5031414D18Rik 3 1 - 1.000 - - - - RIKEN cDNA 5031414D18 gene, transcript variant X2
17. Gm7722 ENSMUSG00000082204 2 1 - 1.000 - - - - predicted gene 7722 [Source:MGI Symbol;Acc:MGI:3644420]
18. 4930554H23Rik ENSMUSG00000097682 2 1 - 1.000 - - - - RIKEN cDNA 4930554H23 gene [Source:MGI Symbol;Acc:MGI:1924881]
19. Gm12945 ENSMUSG00000087394 0 1 - - 1.000 - - - predicted gene 12945 [Source:MGI Symbol;Acc:MGI:3704237]
20. Gm8839 ENSMUSG00000083830 6 1 - - 1.000 - - - predicted gene 8839 [Source:MGI Symbol;Acc:MGI:3647576]
21. Klrb1c ENSMUSG00000030325 1 1 - - 1.000 - - - killer cell lectin-like receptor subfamily B member 1C [Source:MGI Symbol;Acc:MGI:107538]
22. Amelx ENSMUSG00000031354 0 1 - - 1.000 - - - amelogenin, X-linked [Source:MGI Symbol;Acc:MGI:88005]
23. 9130019P16Rik ENSMUSG00000073067 3 1 - 1.000 - - - - RIKEN cDNA 9130019P16 gene [Source:MGI Symbol;Acc:MGI:1918824]
24. Kcng4 ENSMUSG00000045246 3 1 - - 1.000 - - - potassium voltage-gated channel, subfamily G, member 4 [Source:MGI Symbol;Acc:MGI:1913983]
25. Zfp474 ENSMUSG00000046886 1 1 - 1.000 - - - - zinc finger protein 474 [Source:MGI Symbol;Acc:MGI:1914008]
26. Nipal4 ENSMUSG00000020411 1 1 - - 1.000 - - - NIPA-like domain containing 4 [Source:MGI Symbol;Acc:MGI:2444671]
27. Gm22673 ENSMUSG00000077603 1 1 - 1.000 - - - - predicted gene, 22673 [Source:MGI Symbol;Acc:MGI:5452450]
28. Casp1 ENSMUSG00000025888 13 1 1.000 - - - - - caspase 1 [Source:MGI Symbol;Acc:MGI:96544]
29. Nsa2-ps2 ENSMUSG00000083470 2 1 - 1.000 - - - - NSA2 ribosome biogenesis homolog, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3644985]
30. Scp2d1 ENSMUSG00000027431 3 1 - - 1.000 - - - SCP2 sterol-binding domain containing 1 [Source:MGI Symbol;Acc:MGI:1913578]
31. Klhl30 ENSMUSG00000026308 8 1 - - 1.000 - - - kelch-like 30 [Source:MGI Symbol;Acc:MGI:1918038]
32. 1700001J03Rik ENSMUSG00000095040 3 1 - - 1.000 - - - RIKEN cDNA 1700001J03 gene [Source:MGI Symbol;Acc:MGI:1916532]
33. Gm26129 ENSMUSG00000064653 10 1 - - 1.000 - - - predicted gene, 26129 [Source:MGI Symbol;Acc:MGI:5455906]
34. Gm9938 ENSMUSG00000054178 12 1 - 1.000 - - - - predicted gene 9938 [Source:MGI Symbol;Acc:MGI:3641836]
35. Gm15842 ENSMUSG00000083909 1 1 - - 1.000 - - - predicted gene 15842 [Source:MGI Symbol;Acc:MGI:3801843]
36. Gm13428 ENSMUSG00000081496 0 1 - - 1.000 - - - predicted gene 13428 [Source:MGI Symbol;Acc:MGI:3649767]
37. Gm12412 ENSMUSG00000083685 7 1 - 1.000 - - - - predicted gene 12412 [Source:MGI Symbol;Acc:MGI:3649919]
38. Gucy2e ENSMUSG00000020890 7 1 - - 1.000 - - - guanylate cyclase 2e [Source:MGI Symbol;Acc:MGI:105123]
39. Slc1a1 ENSMUSG00000024935 7 1 - 1.000 - - - - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:MGI Symbol;Acc:MGI:105083]
40. Adad2 ENSMUSG00000024266 0 1 - - 1.000 - - - adenosine deaminase domain containing 2 [Source:MGI Symbol;Acc:MGI:1923023]
41. Ppp1r2-ps2 ENSMUSG00000099662 2 1 - 1.000 - - - - protein phosphatase 1, regulatory (inhibitor) subunit 2, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3647847]
42. Galnt2 ENSMUSG00000089704 5 1 - - 1.000 - - - polypeptide N-acetylgalactosaminyltransferase 2 [Source:MGI Symbol;Acc:MGI:894694]
43. Hcst ENSMUSG00000064109 6 1 - 1.000 - - - - hematopoietic cell signal transducer [Source:MGI Symbol;Acc:MGI:1344360]
44. Fam71a ENSMUSG00000091017 2 1 - 1.000 - - - - family with sequence similarity 71, member A [Source:MGI Symbol;Acc:MGI:3588202]
45. Scn10a ENSMUSG00000034533 2 1 - - 1.000 - - - sodium channel, voltage-gated, type X, alpha [Source:MGI Symbol;Acc:MGI:108029]
46. S100a9 ENSMUSG00000056071 48 1 - - 1.000 - - - S100 calcium binding protein A9 (calgranulin B) [Source:MGI Symbol;Acc:MGI:1338947]
47. 4930578C19Rik ENSMUSG00000037358 0 1 - - 1.000 - - - RIKEN cDNA 4930578C19 gene [Source:MGI Symbol;Acc:MGI:1923155]
48. Scp2-ps2 ENSMUSG00000058492 6 1 - 1.000 - - - - sterol carrier protein 2, pseudogene 2 [Source:MGI Symbol;Acc:MGI:107679]
49. Gm6263 ENSMUSG00000080966 2 1 - 1.000 - - - - predicted gene 6263 [Source:MGI Symbol;Acc:MGI:3646097]
50. Gm12326 ENSMUSG00000085251 1 1 - 1.000 - - - - predicted gene 12326 [Source:MGI Symbol;Acc:MGI:3651350]
51. Gabrp ENSMUSG00000020159 21 1 - 1.000 - - - - gamma-aminobutyric acid (GABA) A receptor, pi [Source:MGI Symbol;Acc:MGI:2387597]
52. Gm17082 ENSMUSG00000090674 0 1 - - 1.000 - - - predicted gene 17082 [Source:MGI Symbol;Acc:MGI:4937909]
53. Gm17337 Gm17337 7 1 - 1.000 - - - -
54. Krt25 ENSMUSG00000035831 4 1 - 1.000 - - - - keratin 25 [Source:MGI Symbol;Acc:MGI:1918060]
55. Csmd1 ENSMUSG00000060924 7 1 - - 1.000 - - - CUB and Sushi multiple domains 1 [Source:MGI Symbol;Acc:MGI:2137383]
56. Emr4 Emr4 3 1 - 1.000 - - - -
57. Gm26598 Gm26598 5 1 - - 1.000 - - -
58. Rnase6 ENSMUSG00000021880 4 1 - - 1.000 - - - ribonuclease, RNase A family, 6 [Source:MGI Symbol;Acc:MGI:1925666]
59. Bex6 ENSMUSG00000075269 7 1 - - 1.000 - - - brain expressed family member 6 [Source:MGI Symbol;Acc:MGI:3588247]
60. Rpl35a-ps6 ENSMUSG00000094664 0 1 - - 1.000 - - - ribosomal protein L35A, pseudogene 6 [Source:MGI Symbol;Acc:MGI:3704258]
61. Slc22a2 ENSMUSG00000040966 4 1 - 1.000 - - - - solute carrier family 22 (organic cation transporter), member 2 [Source:MGI Symbol;Acc:MGI:1335072]
62. 3110067C02Rik ENSMUSG00000081187 5 1 - - 1.000 - - - RIKEN cDNA 3110067C02 gene [Source:MGI Symbol;Acc:MGI:1920452]
63. Gm25544 ENSMUSG00000084625 2 1 - 1.000 - - - - predicted gene, 25544 [Source:MGI Symbol;Acc:MGI:5455321]
64. Ptma-ps1 ENSMUSG00000095331 29 1 - - 1.000 - - - prothymosin alpha, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3644252]
65. Gm14393 ENSMUSG00000078905 2 1 - - 1.000 - - - predicted gene 14393 [Source:MGI Symbol;Acc:MGI:3649576]
66. Armc3 ENSMUSG00000037683 2 1 - 1.000 - - - - armadillo repeat containing 3 [Source:MGI Symbol;Acc:MGI:1918132]
67. Iqch ENSMUSG00000037801 19 1 - - 1.000 - - - IQ motif containing H [Source:MGI Symbol;Acc:MGI:1925500]
68. Rbp2 ENSMUSG00000032454 0 1 - - 1.000 - - - retinol binding protein 2, cellular [Source:MGI Symbol;Acc:MGI:97877]
69. Gm5934 ENSMUSG00000084063 3 1 - 1.000 - - - - predicted gene 5934 [Source:MGI Symbol;Acc:MGI:3643862]
70. Paqr6 ENSMUSG00000041423 9 0.968 - 0.968 - - - - progestin and adipoQ receptor family member VI [Source:MGI Symbol;Acc:MGI:1916207]
71. Spp2 ENSMUSG00000026295 29 0.968 0.968 - - - - - secreted phosphoprotein 2 [Source:MGI Symbol;Acc:MGI:1922646]
72. Xlr ENSMUSG00000054626 5 0.961 - - 0.961 - - - X-linked lymphocyte-regulated [Source:MGI Symbol;Acc:MGI:98976]
73. Fgl2 ENSMUSG00000039899 55 0.94 - 0.940 - - - - fibrinogen-like protein 2 [Source:MGI Symbol;Acc:MGI:103266]
74. AI467606 ENSMUSG00000045165 24 0.933 - - 0.933 - - - expressed sequence AI467606 [Source:MGI Symbol;Acc:MGI:2141979]
75. 9230115E21Rik 9230115E21Rik 1 0.928 - - 0.928 - - -
76. Gm13154 25 0.923 - - 0.923 - - - predicted gene 13154, transcript variant X1
77. 4933407L21Rik ENSMUSG00000026224 3 0.922 - 0.922 - - - - RIKEN cDNA 4933407L21 gene [Source:MGI Symbol;Acc:MGI:1918391]
78. Foxg1 ENSMUSG00000020950 1 0.918 - - 0.918 - - - forkhead box G1 [Source:MGI Symbol;Acc:MGI:1347464]
79. Mar-03 Mar-03 8 0.918 - - 0.918 - - -
80. Gm26536 ENSMUSG00000097501 2 0.918 - - 0.918 - - - predicted gene, 26536 [Source:MGI Symbol;Acc:MGI:5477030]
81. Hc ENSMUSG00000026874 12 0.918 - - 0.918 - - - hemolytic complement [Source:MGI Symbol;Acc:MGI:96031]
82. Gm17067 ENSMUSG00000091594 8 0.918 - - 0.918 - - - predicted gene 17067 [Source:MGI Symbol;Acc:MGI:4937894]
83. Gm5065 ENSMUSG00000048398 3 0.918 - - 0.918 - - - predicted gene 5065 [Source:MGI Symbol;Acc:MGI:3643170]
84. Pinlyp ENSMUSG00000011632 3 0.918 - - 0.918 - - - phospholipase A2 inhibitor and LY6/PLAUR domain containing [Source:MGI Symbol;Acc:MGI:3615324]
85. Zfp964 ENSMUSG00000091764 2 0.918 - - 0.918 - - - zinc finger protein 964 [Source:MGI Symbol;Acc:MGI:3646490]
86. Ifltd1 Ifltd1 11 0.918 - - 0.918 - - -
87. U90926 ENSMUSG00000029409 16 0.888 - - 0.888 - - - cDNA sequence U90926 [Source:MGI Symbol;Acc:MGI:1930915]
88. Mnda 5 0.888 - - 0.888 - - - myeloid cell nuclear differentiation antigen, transcript variant X1
89. Gm5215 ENSMUSG00000050978 1 0.888 - - 0.888 - - - predicted gene 5215 [Source:MGI Symbol;Acc:MGI:3644834]
90. Trap1a ENSMUSG00000051257 8 0.888 - - 0.888 - - - tumor rejection antigen P1A [Source:MGI Symbol;Acc:MGI:98818]
91. Phox2a ENSMUSG00000007946 82 0.888 0.888 - - - - - paired-like homeobox 2a [Source:MGI Symbol;Acc:MGI:106633]
92. Gm16045 ENSMUSG00000086050 21 0.887 - 0.887 - - - - predicted gene 16045 [Source:MGI Symbol;Acc:MGI:3801990]
93. Gm13121 ENSMUSG00000083390 4 0.887 - 0.887 - - - - predicted gene 13121 [Source:MGI Symbol;Acc:MGI:3650486]
94. Gm22270 ENSMUSG00000077222 4 0.887 - 0.887 - - - - predicted gene, 22270 [Source:MGI Symbol;Acc:MGI:5452047]
95. Gm13165 ENSMUSG00000086654, ENSMUSG00000116282 1 0.884 - - - - - 0.884 predicted gene 13165 [Source:MGI Symbol;Acc:MGI:3650210]
96. Tmem125 ENSMUSG00000050854 2 0.884 - - - - - 0.884 transmembrane protein 125 [Source:MGI Symbol;Acc:MGI:1923409]
97. Rnf151 ENSMUSG00000008482 6 0.884 - - - - - 0.884 ring finger protein 151 [Source:MGI Symbol;Acc:MGI:1914754]
98. Olfr548-ps1 ENSMUSG00000073978 1 0.884 - - - - - 0.884 olfactory receptor 548, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3030382]
99. Gm12862 ENSMUSG00000087464 1 0.884 - - - - - 0.884 predicted gene 12862 [Source:MGI Symbol;Acc:MGI:3651209]
100. Gm20628 ENSMUSG00000093656 3 0.884 - - - - - 0.884 predicted gene 20628 [Source:MGI Symbol;Acc:MGI:5313075]

There are 234 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA