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Results for Hoxc9

Gene Name Gene ID Reads Annotation
Hoxc9 ENSMUSG00000036139 4145 homeobox C9 [Source:MGI Symbol;Acc:MGI:96199]







Genes with expression patterns similar to Hoxc9

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Hoxc9 ENSMUSG00000036139 4145 6 1.000 1.000 1.000 1.000 1.000 1.000 homeobox C9 [Source:MGI Symbol;Acc:MGI:96199]
2. Pou3f2 ENSMUSG00000095139 2416 4.054 0.736 0.818 0.889 0.867 0.744 - POU domain, class 3, transcription factor 2 [Source:MGI Symbol;Acc:MGI:101895]
3. Ckb ENSMUSG00000001270 8443 3.321 0.765 0.808 0.882 0.866 - - creatine kinase, brain [Source:MGI Symbol;Acc:MGI:88407]
4. Dll3 ENSMUSG00000003436 1086 3.235 0.760 0.862 0.829 0.784 - - delta like canonical Notch ligand 3 [Source:MGI Symbol;Acc:MGI:1096877]
5. Sox2 ENSMUSG00000074637 8409 3.209 0.731 0.770 0.853 0.855 - - SRY (sex determining region Y)-box 2 [Source:MGI Symbol;Acc:MGI:98364]
6. Trp53i11 ENSMUSG00000068735 15944 3.161 0.750 0.859 0.818 0.734 - - transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
7. C130071C03Rik ENSMUSG00000050334 1582 3.16 0.718 0.764 0.850 0.828 - - RIKEN cDNA C130071C03 gene [Source:MGI Symbol;Acc:MGI:2443574]
8. Hes5 ENSMUSG00000048001 1640 3.144 0.749 0.844 0.793 0.758 - - hes family bHLH transcription factor 5 [Source:MGI Symbol;Acc:MGI:104876]
9. Nrarp ENSMUSG00000078202 1708 3.117 0.755 0.742 0.830 0.790 - - Notch-regulated ankyrin repeat protein [Source:MGI Symbol;Acc:MGI:1914372]
10. Cntn2 ENSMUSG00000053024 1798 3.028 - - 0.788 0.736 0.721 0.783 contactin 2 [Source:MGI Symbol;Acc:MGI:104518]
11. Hap1 ENSMUSG00000006930 613 2.91 0.725 0.760 0.704 - 0.721 - huntingtin-associated protein 1 [Source:MGI Symbol;Acc:MGI:1261831]
12. Phf21b ENSMUSG00000016624 849 2.562 - 0.830 0.888 0.844 - - PHD finger protein 21B [Source:MGI Symbol;Acc:MGI:2443812]
13. Pou3f3 ENSMUSG00000045515 5137 2.535 - 0.847 0.880 0.808 - - POU domain, class 3, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102564]
14. Trim2 ENSMUSG00000027993 3587 2.329 0.705 - 0.815 0.809 - - tripartite motif-containing 2 [Source:MGI Symbol;Acc:MGI:1933163]
15. Glra1 ENSMUSG00000000263 586 2.319 - 0.768 0.791 0.760 - - glycine receptor, alpha 1 subunit [Source:MGI Symbol;Acc:MGI:95747]
16. Slc1a2 ENSMUSG00000005089 830 2.312 0.750 - 0.740 0.822 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2 [Source:MGI Symbol;Acc:MGI:101931]
17. Tagln3 ENSMUSG00000022658 6054 2.308 - 0.713 0.842 0.753 - - transgelin 3 [Source:MGI Symbol;Acc:MGI:1926784]
18. Rhbdl3 ENSMUSG00000017692 783 2.306 - 0.773 0.804 0.729 - - rhomboid like 3 [Source:MGI Symbol;Acc:MGI:2179276]
19. 2610017I09Rik 2610017I09Rik 1595 2.305 0.719 - 0.770 0.816 - -
20. Dtx4 ENSMUSG00000039982 2901 2.299 - 0.718 0.767 0.814 - - deltex 4, E3 ubiquitin ligase [Source:MGI Symbol;Acc:MGI:2672905]
21. Dpysl5 ENSMUSG00000029168 2096 2.283 0.749 - 0.793 0.741 - - dihydropyrimidinase-like 5 [Source:MGI Symbol;Acc:MGI:1929772]
22. Hoxb9 ENSMUSG00000020875 2764 2.281 0.704 - 0.752 0.825 - - homeobox B9 [Source:MGI Symbol;Acc:MGI:96190]
23. Celsr2 ENSMUSG00000068740 2010 2.277 - - 0.851 0.714 - 0.712 cadherin, EGF LAG seven-pass G-type receptor 2 [Source:MGI Symbol;Acc:MGI:1858235]
24. Hes6 ENSMUSG00000067071 1692 2.265 0.739 - 0.767 0.759 - - hairy and enhancer of split 6 [Source:MGI Symbol;Acc:MGI:1859852]
25. Map2 ENSMUSG00000015222 2576 2.26 0.738 - 0.807 0.715 - - microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
26. Map1b ENSMUSG00000052727 28977 2.255 - - 0.767 0.762 0.726 - microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
27. Nhlh2 ENSMUSG00000048540 1310 2.25 - 0.710 0.739 0.801 - - nescient helix loop helix 2 [Source:MGI Symbol;Acc:MGI:97324]
28. Igsf8 ENSMUSG00000038034 9546 2.249 - 0.767 0.735 0.747 - - immunoglobulin superfamily, member 8 [Source:MGI Symbol;Acc:MGI:2154090]
29. Pou3f1 ENSMUSG00000090125 496 2.148 0.726 0.713 0.709 - - - POU domain, class 3, transcription factor 1 [Source:MGI Symbol;Acc:MGI:101896]
30. Tubb2b ENSMUSG00000045136 41060 1.704 - - 0.885 0.819 - - tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
31. Miat ENSMUSG00000097767 4258 1.68 - - 0.866 0.814 - - myocardial infarction associated transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444886]
32. Nes ENSMUSG00000004891 8017 1.62 - - 0.797 0.823 - - nestin [Source:MGI Symbol;Acc:MGI:101784]
33. Apba2 ENSMUSG00000030519 840 1.618 - - 0.796 0.822 - - amyloid beta (A4) precursor protein-binding, family A, member 2 [Source:MGI Symbol;Acc:MGI:1261791]
34. Crabp2 ENSMUSG00000004885 6976 1.598 - 0.807 0.791 - - - cellular retinoic acid binding protein II [Source:MGI Symbol;Acc:MGI:88491]
35. Zfp536 ENSMUSG00000043456 869 1.598 - - 0.779 0.819 - - zinc finger protein 536 [Source:MGI Symbol;Acc:MGI:1926102]
36. Nova1 ENSMUSG00000021047 658 1.596 - - 0.864 - 0.732 - neuro-oncological ventral antigen 1 [Source:MGI Symbol;Acc:MGI:104297]
37. Spsb4 ENSMUSG00000046997 5432 1.594 0.801 - 0.793 - - - splA/ryanodine receptor domain and SOCS box containing 4 [Source:MGI Symbol;Acc:MGI:2183445]
38. Hoxc6 ENSMUSG00000001661 9818 1.592 - - 0.723 0.869 - - homeobox C6 [Source:MGI Symbol;Acc:MGI:96197]
39. Rfx4 ENSMUSG00000020037 455 1.577 0.747 - 0.830 - - - regulatory factor X, 4 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:1918387]
40. Srgap3 ENSMUSG00000030257 2941 1.572 - - 0.818 0.754 - - SLIT-ROBO Rho GTPase activating protein 3 [Source:MGI Symbol;Acc:MGI:2152938]
41. Ap3b2 ENSMUSG00000062444 565 1.563 - 0.733 0.830 - - - adaptor-related protein complex 3, beta 2 subunit [Source:MGI Symbol;Acc:MGI:1100869]
42. Mapk8ip2 ENSMUSG00000022619 910 1.555 - - 0.806 0.749 - - mitogen-activated protein kinase 8 interacting protein 2 [Source:MGI Symbol;Acc:MGI:1926555]
43. Zbtb18 ENSMUSG00000063659 1287 1.553 0.770 0.783 - - - - zinc finger and BTB domain containing 18 [Source:MGI Symbol;Acc:MGI:1353609]
44. Sox3 ENSMUSG00000045179 1137 1.549 - 0.753 0.796 - - - SRY (sex determining region Y)-box 3 [Source:MGI Symbol;Acc:MGI:98365]
45. Elavl3 ENSMUSG00000003410 2830 1.549 - - 0.760 0.789 - - ELAV like RNA binding protein 3 [Source:MGI Symbol;Acc:MGI:109157]
46. Soga3 ENSMUSG00000038916 3972 1.543 - - 0.759 0.784 - - SOGA family member 3 [Source:MGI Symbol;Acc:MGI:1914662]
47. Fam181b ENSMUSG00000051515 734 1.536 - - 0.797 - 0.739 - family with sequence similarity 181, member B [Source:MGI Symbol;Acc:MGI:1930951]
48. Tuba1a ENSMUSG00000072235 51129 1.526 - - 0.720 0.806 - - tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
49. Msi1 ENSMUSG00000054256 13785 1.52 - - 0.720 0.800 - - musashi RNA-binding protein 1 [Source:MGI Symbol;Acc:MGI:107376]
50. Ebf1 ENSMUSG00000057098 3112 1.517 - - - 0.811 0.706 - early B cell factor 1 [Source:MGI Symbol;Acc:MGI:95275]
51. Sall3 ENSMUSG00000024565 449 1.516 - - 0.744 0.772 - - spalt like transcription factor 3 [Source:MGI Symbol;Acc:MGI:109295]
52. Gpr98 Gpr98 1797 1.515 - - 0.798 0.717 - -
53. Trim9 ENSMUSG00000021071 870 1.505 - 0.720 0.785 - - - tripartite motif-containing 9 [Source:MGI Symbol;Acc:MGI:2137354]
54. Btbd17 ENSMUSG00000000202 565 1.501 0.712 0.789 - - - - BTB (POZ) domain containing 17 [Source:MGI Symbol;Acc:MGI:1919264]
55. Nell2 ENSMUSG00000022454 870 1.499 - - 0.713 - 0.786 - NEL-like 2 [Source:MGI Symbol;Acc:MGI:1858510]
56. Sox2ot ENSMUSG00000105265 475 1.499 - - 0.790 0.709 - - SOX2 overlapping transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444112]
57. Fzd10 ENSMUSG00000081683 998 1.496 - - 0.728 0.768 - - frizzled class receptor 10 [Source:MGI Symbol;Acc:MGI:2136761]
58. Nedd9 ENSMUSG00000021365 1501 1.49 0.774 0.716 - - - - neural precursor cell expressed, developmentally down-regulated gene 9 [Source:MGI Symbol;Acc:MGI:97302]
59. Slc35f1 ENSMUSG00000038602 342 1.483 - - - 0.754 0.729 - solute carrier family 35, member F1 [Source:MGI Symbol;Acc:MGI:2139810]
60. Mkrn1 ENSMUSG00000029922 1839 1.476 0.724 - 0.752 - - - makorin, ring finger protein, 1 [Source:MGI Symbol;Acc:MGI:1859353]
61. Pax3 ENSMUSG00000004872 3095 1.473 0.748 - - 0.725 - - paired box 3 [Source:MGI Symbol;Acc:MGI:97487]
62. Hoxd3 ENSMUSG00000079277 3066 1.451 - - 0.731 0.720 - - homeobox D3 [Source:MGI Symbol;Acc:MGI:96207]
63. Ildr2 ENSMUSG00000040612 1142 1.451 0.749 0.702 - - - - immunoglobulin-like domain containing receptor 2 [Source:MGI Symbol;Acc:MGI:1196370]
64. Fabp7 ENSMUSG00000019874 3183 1.45 - - 0.706 0.744 - - fatty acid binding protein 7, brain [Source:MGI Symbol;Acc:MGI:101916]
65. A930011O12Rik A930011O12Rik 359 1.447 - - 0.715 - 0.732 -
66. Pcdh8 ENSMUSG00000036422 452 1.44 0.727 - 0.713 - - - protocadherin 8 [Source:MGI Symbol;Acc:MGI:1306800]
67. Fez1 ENSMUSG00000032118 2537 1.432 - - 0.716 0.716 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:MGI Symbol;Acc:MGI:2670976]
68. Tox3 ENSMUSG00000043668 4413 1.425 - 0.701 - - 0.724 - TOX high mobility group box family member 3 [Source:MGI Symbol;Acc:MGI:3039593]
69. Jam2 ENSMUSG00000053062 1020 0.882 - - - 0.882 - - junction adhesion molecule 2 [Source:MGI Symbol;Acc:MGI:1933820]
70. Zic4 ENSMUSG00000036972 1968 0.856 - - - 0.856 - - zinc finger protein of the cerebellum 4 [Source:MGI Symbol;Acc:MGI:107201]
71. Zic1 ENSMUSG00000032368 7734 0.835 - - - 0.835 - - zinc finger protein of the cerebellum 1 [Source:MGI Symbol;Acc:MGI:106683]
72. Stmn4 ENSMUSG00000022044 140 0.834 - - 0.834 - - - stathmin-like 4 [Source:MGI Symbol;Acc:MGI:1931224]
73. Cspg5 ENSMUSG00000032482 105 0.833 - - 0.833 - - - chondroitin sulfate proteoglycan 5 [Source:MGI Symbol;Acc:MGI:1352747]
74. Brsk2 ENSMUSG00000053046 398 0.828 - - 0.828 - - - BR serine/threonine kinase 2 [Source:MGI Symbol;Acc:MGI:1923020]
75. Pea15a ENSMUSG00000013698 6011 0.824 - - 0.824 - - - phosphoprotein enriched in astrocytes 15A [Source:MGI Symbol;Acc:MGI:104799]
76. Hnrnpa0 ENSMUSG00000007836 36645 0.82 - - - - 0.820 - heterogeneous nuclear ribonucleoprotein A0 [Source:MGI Symbol;Acc:MGI:1924384]
77. Npas3 ENSMUSG00000021010 2049 0.816 - - - 0.816 - - neuronal PAS domain protein 3 [Source:MGI Symbol;Acc:MGI:1351610]
78. Btg2 ENSMUSG00000020423 1222 0.811 - - 0.811 - - - B cell translocation gene 2, anti-proliferative [Source:MGI Symbol;Acc:MGI:108384]
79. Dpysl4 ENSMUSG00000025478, ENSMUSG00000111393 1028 0.809 - - 0.809 - - - dihydropyrimidinase-like 4 [Source:MGI Symbol;Acc:MGI:1349764]
80. Foxb1 ENSMUSG00000059246 293 0.808 - - 0.808 - - - forkhead box B1 [Source:MGI Symbol;Acc:MGI:1927549]
81. Wscd1 ENSMUSG00000020811 318 0.807 - - 0.807 - - - WSC domain containing 1 [Source:MGI Symbol;Acc:MGI:2448493]
82. Ptchd2 190 0.806 - - 0.806 - - - patched domain containing 2, transcript variant X2
83. Nhlh1 ENSMUSG00000051251 2017 0.8 - - 0.800 - - - nescient helix loop helix 1 [Source:MGI Symbol;Acc:MGI:98481]
84. AI854517 AI854517 539 0.797 - - 0.797 - - -
85. Hnrnpa1 ENSMUSG00000046434 25429 0.794 - - - 0.794 - - heterogeneous nuclear ribonucleoprotein A1 [Source:MGI Symbol;Acc:MGI:104820]
86. Rmst ENSMUSG00000112117 594 0.792 - - - - 0.792 - rhabdomyosarcoma 2 associated transcript (non-coding RNA) [Source:MGI Symbol;Acc:MGI:1099806]
87. Mycl ENSMUSG00000028654 904 0.789 - - 0.789 - - - v-myc avian myelocytomatosis viral oncogene lung carcinoma derived [Source:MGI Symbol;Acc:MGI:96799]
88. Plk3 ENSMUSG00000028680 442 0.788 - - 0.788 - - - polo like kinase 3 [Source:MGI Symbol;Acc:MGI:109604]
89. Tspan18 ENSMUSG00000027217 3290 0.787 0.787 - - - - - tetraspanin 18 [Source:MGI Symbol;Acc:MGI:1917186]
90. Nuak2 ENSMUSG00000009772 426 0.786 - - 0.786 - - - NUAK family, SNF1-like kinase, 2 [Source:MGI Symbol;Acc:MGI:1921387]
91. Rtn3 ENSMUSG00000024758 11055 0.779 - - 0.779 - - - reticulon 3 [Source:MGI Symbol;Acc:MGI:1339970]
92. Frmd5 ENSMUSG00000027238 224 0.779 - - 0.779 - - - FERM domain containing 5 [Source:MGI Symbol;Acc:MGI:2442557]
93. Ccdc177 ENSMUSG00000062961 159 0.776 - - - 0.776 - - coiled-coil domain containing 177 [Source:MGI Symbol;Acc:MGI:2686414]
94. Nrxn2 ENSMUSG00000033768, ENSMUSG00000107104 552 0.775 - - 0.775 - - - neurexin II [Source:MGI Symbol;Acc:MGI:1096362]
95. Khdrbs3 ENSMUSG00000022332 2266 0.771 0.771 - - - - - KH domain containing, RNA binding, signal transduction associated 3 [Source:MGI Symbol;Acc:MGI:1313312]
96. Fam19a5 ENSMUSG00000054863 859 0.769 - 0.769 - - - - family with sequence similarity 19, member A5 [Source:MGI Symbol;Acc:MGI:2146182]
97. Syt11 ENSMUSG00000068923 7491 0.769 - - 0.769 - - - synaptotagmin XI [Source:MGI Symbol;Acc:MGI:1859547]
98. Acot7 ENSMUSG00000028937 5139 0.768 - - 0.768 - - - acyl-CoA thioesterase 7 [Source:MGI Symbol;Acc:MGI:1917275]
99. Dach1 ENSMUSG00000055639 1422 0.766 0.766 - - - - - dachshund family transcription factor 1 [Source:MGI Symbol;Acc:MGI:1277991]
100. Psat1 ENSMUSG00000024640 15774 0.762 0.762 - - - - - phosphoserine aminotransferase 1 [Source:MGI Symbol;Acc:MGI:2183441]

There are 99 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA