Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Hmx1

Gene Name Gene ID Reads Annotation
Hmx1 ENSMUSG00000067438 72 H6 homeobox 1 [Source:MGI Symbol;Acc:MGI:107178]







Genes with expression patterns similar to Hmx1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Hmx1 ENSMUSG00000067438 72 6 1.000 1.000 1.000 1.000 1.000 1.000 H6 homeobox 1 [Source:MGI Symbol;Acc:MGI:107178]
2. Rgs4 ENSMUSG00000038530 539 3.791 0.817 - 0.788 0.703 0.746 0.737 regulator of G-protein signaling 4 [Source:MGI Symbol;Acc:MGI:108409]
3. Sst ENSMUSG00000004366 517 3.222 - - 0.906 0.723 0.753 0.840 somatostatin [Source:MGI Symbol;Acc:MGI:98326]
4. Ppp1r1c ENSMUSG00000034683 286 3.181 0.833 - 0.745 - 0.762 0.841 protein phosphatase 1, regulatory inhibitor subunit 1C [Source:MGI Symbol;Acc:MGI:1923185]
5. Neurod1 ENSMUSG00000034701 1390 2.389 0.711 - - 0.760 - 0.918 neurogenic differentiation 1 [Source:MGI Symbol;Acc:MGI:1339708]
6. Shox2 ENSMUSG00000027833 200 2.326 0.858 - - 0.707 - 0.761 short stature homeobox 2 [Source:MGI Symbol;Acc:MGI:1201673]
7. Thsd7b ENSMUSG00000042581 91 2.297 - - 0.757 - 0.740 0.800 thrombospondin, type I, domain containing 7B [Source:MGI Symbol;Acc:MGI:2443925]
8. Dmrt3 ENSMUSG00000042372 26 1.708 - 0.843 0.865 - - - doublesex and mab-3 related transcription factor 3 [Source:MGI Symbol;Acc:MGI:2449470]
9. Ppp1r17 ENSMUSG00000002930 374 1.683 0.758 - - - - 0.925 protein phosphatase 1, regulatory subunit 17 [Source:MGI Symbol;Acc:MGI:1333876]
10. Slc32a1 ENSMUSG00000037771 59 1.647 - - 0.876 0.771 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:MGI Symbol;Acc:MGI:1194488]
11. Mreg ENSMUSG00000039395 397 1.618 - - - - 0.825 0.793 melanoregulin [Source:MGI Symbol;Acc:MGI:2151839]
12. D930028M14Rik ENSMUSG00000074274 452 1.614 - - - 0.786 - 0.828 RIKEN cDNA D930028M14 gene [Source:MGI Symbol;Acc:MGI:3687343]
13. Scn5a ENSMUSG00000032511 20 1.609 - - - - 0.776 0.833 sodium channel, voltage-gated, type V, alpha [Source:MGI Symbol;Acc:MGI:98251]
14. Tlx3 ENSMUSG00000040610 161 1.598 0.754 - - - - 0.844 T cell leukemia, homeobox 3 [Source:MGI Symbol;Acc:MGI:1351209]
15. Otp ENSMUSG00000021685 170 1.598 0.870 - 0.728 - - - orthopedia homeobox [Source:MGI Symbol;Acc:MGI:99835]
16. 2610034M16Rik 2610034M16Rik 71 1.579 - 0.839 - - 0.740 -
17. RP24-312G4.2 RP24-312G4.2 350 1.576 - - - 0.741 - 0.835
18. Prdm12 ENSMUSG00000079466 202 1.552 0.719 - - 0.833 - - PR domain containing 12 [Source:MGI Symbol;Acc:MGI:2685844]
19. 5730457N03Rik 5730457N03Rik 14 1.486 0.751 - 0.735 - - -
20. Cdhr1 ENSMUSG00000021803 79 1.457 - - 0.724 - 0.733 - cadherin-related family member 1 [Source:MGI Symbol;Acc:MGI:2157782]
21. RP24-351J24.2 RP24-351J24.2 8 0.928 - - 0.928 - - -
22. Pou4f1 ENSMUSG00000048349 61 0.928 - - 0.928 - - - POU domain, class 4, transcription factor 1 [Source:MGI Symbol;Acc:MGI:102525]
23. Gm15457 ENSMUSG00000087374 23 0.924 - - 0.924 - - - predicted gene 15457 [Source:MGI Symbol;Acc:MGI:3705190]
24. Gm12271 ENSMUSG00000082032 1 0.919 - 0.919 - - - - predicted gene 12271 [Source:MGI Symbol;Acc:MGI:3650794]
25. Csmd2 ENSMUSG00000028804 32 0.919 - 0.919 - - - - CUB and Sushi multiple domains 2 [Source:MGI Symbol;Acc:MGI:2386401]
26. Gm10113 ENSMUSG00000062282 1 0.919 - 0.919 - - - - predicted gene 10113 [Source:MGI Symbol;Acc:MGI:3642714]
27. Dmgdh ENSMUSG00000042102 5 0.919 - 0.919 - - - - dimethylglycine dehydrogenase precursor [Source:MGI Symbol;Acc:MGI:1921379]
28. Chi3l1 Chi3l1 5 0.919 - 0.919 - - - -
29. Gm10935 Gm10935 1 0.919 - 0.919 - - - -
30. 4930507D05Rik ENSMUSG00000097129 15 0.919 - 0.919 - - - - RIKEN cDNA 4930507D05 gene [Source:MGI Symbol;Acc:MGI:1921956]
31. Gm24436 ENSMUSG00000088514 2 0.919 - 0.919 - - - - predicted gene, 24436 [Source:MGI Symbol;Acc:MGI:5454213]
32. Btg3 ENSMUSG00000022863 18 0.919 - 0.919 - - - - B cell translocation gene 3 [Source:MGI Symbol;Acc:MGI:109532]
33. Rnf138rt1 ENSMUSG00000083695 3 0.919 - 0.919 - - - - ring finger protein 138, retrogene 1 [Source:MGI Symbol;Acc:MGI:1921514]
34. Gm23817 ENSMUSG00000089074 4 0.919 - 0.919 - - - - predicted gene, 23817 [Source:MGI Symbol;Acc:MGI:5453594]
35. Bdkrb1 ENSMUSG00000041347 4 0.919 - 0.919 - - - - bradykinin receptor, beta 1 [Source:MGI Symbol;Acc:MGI:88144]
36. Gm14541 ENSMUSG00000084265 6 0.919 - 0.919 - - - - predicted gene 14541 [Source:MGI Symbol;Acc:MGI:3709642]
37. Gm14168 ENSMUSG00000055494 6 0.919 - 0.919 - - - - predicted gene 14168 [Source:MGI Symbol;Acc:MGI:3651463]
38. Selp ENSMUSG00000026580 4 0.919 - 0.919 - - - - selectin, platelet [Source:MGI Symbol;Acc:MGI:98280]
39. Hmgb1-ps2 ENSMUSG00000081738 1 0.919 - 0.919 - - - - high mobility group box 1, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3768537]
40. Gm6039 ENSMUSG00000083736 1 0.919 - 0.919 - - - - predicted gene 6039 [Source:MGI Symbol;Acc:MGI:3648055]
41. Gm3625 ENSMUSG00000091619 1 0.919 - 0.919 - - - - predicted gene 3625 [Source:MGI Symbol;Acc:MGI:3781801]
42. 4930555B11Rik ENSMUSG00000086396 2 0.919 - 0.919 - - - - RIKEN cDNA 4930555B11 gene [Source:MGI Symbol;Acc:MGI:1922529]
43. Mical1 ENSMUSG00000019823 14 0.919 - 0.919 - - - - microtubule associated monooxygenase, calponin and LIM domain containing 1 [Source:MGI Symbol;Acc:MGI:2385847]
44. Gm8566 ENSMUSG00000047905 10 0.919 - 0.919 - - - - predicted pseudogene 8566 [Source:MGI Symbol;Acc:MGI:3647296]
45. Gm10709 ENSMUSG00000074516 18 0.919 - 0.919 - - - - predicted gene 10709 [Source:MGI Symbol;Acc:MGI:3642754]
46. Gm12183 ENSMUSG00000082454 8 0.919 - 0.919 - - - - predicted gene 12183 [Source:MGI Symbol;Acc:MGI:3652175]
47. Rps12-ps3 ENSMUSG00000067038 9 0.919 - 0.919 - - - - ribosomal protein S12, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3704503]
48. 4930550C17Rik ENSMUSG00000097361 1 0.919 - 0.919 - - - - RIKEN cDNA 4930550C17 gene [Source:MGI Symbol;Acc:MGI:1922495]
49. Gm20507 ENSMUSG00000092412 1 0.919 - 0.919 - - - - predicted gene 20507 [Source:MGI Symbol;Acc:MGI:5141972]
50. Fam83f ENSMUSG00000022408 5 0.919 - 0.919 - - - - family with sequence similarity 83, member F [Source:MGI Symbol;Acc:MGI:2146227]
51. Gm12186 ENSMUSG00000084153 4 0.919 - 0.919 - - - - predicted gene 12186 [Source:MGI Symbol;Acc:MGI:3649200]
52. Egfem1 ENSMUSG00000063600 71 0.894 - 0.894 - - - - EGF-like and EMI domain containing 1 [Source:MGI Symbol;Acc:MGI:1922990]
53. Ptprr ENSMUSG00000020151 26 0.887 - - 0.887 - - - protein tyrosine phosphatase, receptor type, R [Source:MGI Symbol;Acc:MGI:109559]
54. Dbx1 ENSMUSG00000030507 205 0.878 0.878 - - - - - developing brain homeobox 1 [Source:MGI Symbol;Acc:MGI:94867]
55. Pou4f3 ENSMUSG00000024497 58 0.868 - - - - 0.868 - POU domain, class 4, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102523]
56. Gbx1 ENSMUSG00000067724 16 0.864 - - 0.864 - - - gastrulation brain homeobox 1 [Source:MGI Symbol;Acc:MGI:95667]
57. Evx1 ENSMUSG00000005503 33 0.864 - - 0.864 - - - even-skipped homeobox 1 [Source:MGI Symbol;Acc:MGI:95461]
58. Hes3 ENSMUSG00000028946 73 0.86 - - 0.860 - - - hes family bHLH transcription factor 3 [Source:MGI Symbol;Acc:MGI:104877]
59. Arc ENSMUSG00000022602 25 0.848 - - 0.848 - - - activity regulated cytoskeletal-associated protein [Source:MGI Symbol;Acc:MGI:88067]
60. Ttll7 ENSMUSG00000036745 254 0.841 - - - - - 0.841 tubulin tyrosine ligase-like family, member 7 [Source:MGI Symbol;Acc:MGI:1918142]
61. Lamp5 ENSMUSG00000027270 112 0.834 - - 0.834 - - - lysosomal-associated membrane protein family, member 5 [Source:MGI Symbol;Acc:MGI:1923411]
62. Robo3 ENSMUSG00000032128 389 0.833 - - 0.833 - - - roundabout guidance receptor 3 [Source:MGI Symbol;Acc:MGI:1343102]
63. Ntrk1 ENSMUSG00000028072 70 0.831 - - 0.831 - - - neurotrophic tyrosine kinase, receptor, type 1 [Source:MGI Symbol;Acc:MGI:97383]
64. Gbp8 ENSMUSG00000034438 31 0.829 0.829 - - - - - guanylate-binding protein 8 [Source:MGI Symbol;Acc:MGI:1923324]
65. Gm15491 ENSMUSG00000087367 3 0.828 - 0.828 - - - - predicted gene 15491 [Source:MGI Symbol;Acc:MGI:3782937]
66. 1700112J16Rik ENSMUSG00000097527 5 0.828 - 0.828 - - - - RIKEN cDNA 1700112J16 gene [Source:MGI Symbol;Acc:MGI:1923878]
67. Gm17678 Gm17678 2 0.821 - - 0.821 - - -
68. Dbx2 ENSMUSG00000045608 77 0.819 0.819 - - - - - developing brain homeobox 2 [Source:MGI Symbol;Acc:MGI:107445]
69. Gm14204 ENSMUSG00000086496 30 0.806 - - 0.806 - - - predicted gene 14204 [Source:MGI Symbol;Acc:MGI:3651576]
70. Gm13623 ENSMUSG00000083007 12 0.799 0.799 - - - - - predicted gene 13623 [Source:MGI Symbol;Acc:MGI:3649578]
71. Gm26638 ENSMUSG00000097563 57 0.795 0.795 - - - - - predicted gene, 26638 [Source:MGI Symbol;Acc:MGI:5477132]
72. Lhx5 ENSMUSG00000029595 102 0.791 - - 0.791 - - - LIM homeobox protein 5 [Source:MGI Symbol;Acc:MGI:107792]
73. Grm2 ENSMUSG00000023192 147 0.787 - - - - - 0.787 glutamate receptor, metabotropic 2 [Source:MGI Symbol;Acc:MGI:1351339]
74. Npr2 ENSMUSG00000028469 946 0.786 - - 0.786 - - - natriuretic peptide receptor 2 [Source:MGI Symbol;Acc:MGI:97372]
75. Gng3 ENSMUSG00000071658 2104 0.777 - - - 0.777 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:MGI Symbol;Acc:MGI:102704]
76. Klhl1 ENSMUSG00000022076 8 0.776 - - 0.776 - - - kelch-like 1 [Source:MGI Symbol;Acc:MGI:2136335]
77. Nacad ENSMUSG00000041073 114 0.775 - - - 0.775 - - NAC alpha domain containing [Source:MGI Symbol;Acc:MGI:3603030]
78. Slc6a5 ENSMUSG00000039728 13 0.773 - - - 0.773 - - solute carrier family 6 (neurotransmitter transporter, glycine), member 5 [Source:MGI Symbol;Acc:MGI:105090]
79. Gm26631 ENSMUSG00000097445 22 0.767 - 0.767 - - - - predicted gene, 26631 [Source:MGI Symbol;Acc:MGI:5477125]
80. Spock2 ENSMUSG00000058297 1096 0.759 - - - 0.759 - - sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 [Source:MGI Symbol;Acc:MGI:1891351]
81. Bhlhe22 ENSMUSG00000025128 194 0.756 - - 0.756 - - - basic helix-loop-helix family, member e22 [Source:MGI Symbol;Acc:MGI:1930001]
82. Slco4a1 ENSMUSG00000038963 100 0.755 - - 0.755 - - - solute carrier organic anion transporter family, member 4a1 [Source:MGI Symbol;Acc:MGI:1351866]
83. Ddx43 ENSMUSG00000070291 17 0.753 0.753 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Source:MGI Symbol;Acc:MGI:3642857]
84. Pex5l ENSMUSG00000027674 104 0.751 - - 0.751 - - - peroxisomal biogenesis factor 5-like [Source:MGI Symbol;Acc:MGI:1916672]
85. Kcnmb2 ENSMUSG00000037610 111 0.75 - - 0.750 - - - potassium large conductance calcium-activated channel, subfamily M, beta member 2 [Source:MGI Symbol;Acc:MGI:1919663]
86. AA387200 ENSMUSG00000085946 7 0.749 - - 0.749 - - - expressed sequence AA387200 [Source:MGI Symbol;Acc:MGI:3034170]
87. Npff ENSMUSG00000023052 4 0.748 - - - - - 0.748 neuropeptide FF-amide peptide precursor [Source:MGI Symbol;Acc:MGI:1891708]
88. Tifab ENSMUSG00000049625 21 0.748 - 0.748 - - - - TRAF-interacting protein with forkhead-associated domain, family member B [Source:MGI Symbol;Acc:MGI:2385852]
89. Gm4258 ENSMUSG00000098243 99 0.747 - - 0.747 - - - predicted gene 4258 [Source:MGI Symbol;Acc:MGI:3782435]
90. Gm13935 ENSMUSG00000083320 6 0.747 - - 0.747 - - - predicted gene 13935 [Source:MGI Symbol;Acc:MGI:3651886]
91. Skor1 ENSMUSG00000022245 61 0.746 - 0.746 - - - - SKI family transcriptional corepressor 1 [Source:MGI Symbol;Acc:MGI:2443473]
92. A730085A09Rik A730085A09Rik 14 0.742 - 0.742 - - - -
93. Pcdh8 ENSMUSG00000036422 452 0.739 - - 0.739 - - - protocadherin 8 [Source:MGI Symbol;Acc:MGI:1306800]
94. 4933427I04Rik ENSMUSG00000073761 19 0.738 - - 0.738 - - - Riken cDNA 4933427I04 gene [Source:MGI Symbol;Acc:MGI:3613760]
95. Lair1 ENSMUSG00000055541 12 0.738 0.738 - - - - - leukocyte-associated Ig-like receptor 1 [Source:MGI Symbol;Acc:MGI:105492]
96. Igsf21 ENSMUSG00000040972 143 0.737 - - - 0.737 - - immunoglobulin superfamily, member 21 [Source:MGI Symbol;Acc:MGI:2681842]
97. Cp ENSMUSG00000003617 98 0.734 0.734 - - - - - ceruloplasmin [Source:MGI Symbol;Acc:MGI:88476]
98. Ptch1 ENSMUSG00000021466 15 0.733 0.733 - - - - - patched 1 [Source:MGI Symbol;Acc:MGI:105373]
99. A430105J06Rik ENSMUSG00000097784 12 0.726 - 0.726 - - - - RIKEN cDNA A430105J06 gene [Source:MGI Symbol;Acc:MGI:1924439]
100. Ric3 ENSMUSG00000048330 247 0.726 - - - 0.726 - - RIC3 acetylcholine receptor chaperone [Source:MGI Symbol;Acc:MGI:2443887]

There are 62 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA