Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Hmgb1-ps5

Gene Name Gene ID Reads Annotation
Hmgb1-ps5 ENSMUSG00000083822 8 high mobility group box 1, pseudogene 5 [Source:MGI Symbol;Acc:MGI:3776505]







Genes with expression patterns similar to Hmgb1-ps5

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Hmgb1-ps5 ENSMUSG00000083822 8 5 1.000 1.000 1.000 1.000 1.000 - high mobility group box 1, pseudogene 5 [Source:MGI Symbol;Acc:MGI:3776505]
2. Cass4 ENSMUSG00000074570 9 2 - - 1.000 1.000 - - Cas scaffolding protein family member 4 [Source:MGI Symbol;Acc:MGI:2444482]
3. Gm17227 ENSMUSG00000091558 1 1.88 - 1.000 0.880 - - - predicted gene 17227 [Source:MGI Symbol;Acc:MGI:4938054]
4. Gm12933 ENSMUSG00000081210 17 1.817 0.817 - - 1.000 - - predicted gene 12933 [Source:MGI Symbol;Acc:MGI:3651147]
5. Nrg4 ENSMUSG00000032311 5 1.814 0.814 - - 1.000 - - neuregulin 4 [Source:MGI Symbol;Acc:MGI:1933833]
6. Gdf3 ENSMUSG00000030117 21 1.743 - 1.000 - 0.743 - - growth differentiation factor 3 [Source:MGI Symbol;Acc:MGI:95686]
7. Gm11517 ENSMUSG00000081249 5 1.624 0.837 0.787 - - - - predicted gene 11517 [Source:MGI Symbol;Acc:MGI:3650064]
8. Arl11 ENSMUSG00000043157 10 1 - - - 1.000 - - ADP-ribosylation factor-like 11 [Source:MGI Symbol;Acc:MGI:2444054]
9. Gm13829 ENSMUSG00000082610 1 1 - 1.000 - - - - predicted gene 13829 [Source:MGI Symbol;Acc:MGI:3651367]
10. Gm7278 ENSMUSG00000080950 15 1 - 1.000 - - - - predicted gene 7278 [Source:MGI Symbol;Acc:MGI:3645261]
11. Gm11450 ENSMUSG00000082296 3 1 - 1.000 - - - - predicted gene 11450 [Source:MGI Symbol;Acc:MGI:3651345]
12. Skint3 ENSMUSG00000070868 2 1 - - - 1.000 - - selection and upkeep of intraepithelial T cells 3 [Source:MGI Symbol;Acc:MGI:3045331]
13. AA467197 ENSMUSG00000033213, ENSMUSG00000110868 7 1 - - - 1.000 - - expressed sequence AA467197 [Source:MGI Symbol;Acc:MGI:3034182]
14. Gm11240 ENSMUSG00000085034 3 1 - - - 1.000 - - predicted gene 11240 [Source:MGI Symbol;Acc:MGI:3651058]
15. Gm13657 ENSMUSG00000086813 15 1 - - - 1.000 - - predicted gene 13657 [Source:MGI Symbol;Acc:MGI:3650031]
16. Gm14508 ENSMUSG00000085376 1 1 - - - 1.000 - - predicted gene 14508 [Source:MGI Symbol;Acc:MGI:3705279]
17. 4930455G09Rik ENSMUSG00000085761, ENSMUSG00000116484 12 1 - 1.000 - - - - RIKEN cDNA 4930455G09 gene [Source:MGI Symbol;Acc:MGI:1926167]
18. Crhr2 ENSMUSG00000003476 1 1 - - - 1.000 - - corticotropin releasing hormone receptor 2 [Source:MGI Symbol;Acc:MGI:894312]
19. Sh3rf2 ENSMUSG00000057719 60 1 - 1.000 - - - - SH3 domain containing ring finger 2 [Source:MGI Symbol;Acc:MGI:2444628]
20. Gm26845 Gm26845 2 1 - 1.000 - - - -
21. Gm15497 ENSMUSG00000081142 0 1 - - 1.000 - - - predicted gene 15497 [Source:MGI Symbol;Acc:MGI:3782944]
22. BC021614 2 1 - - - 1.000 - - cDNA sequence BC021614, transcript variant X1
23. Gm5068 Gm5068 1 1 - 1.000 - - - -
24. Dhh ENSMUSG00000023000 23 1 - 1.000 - - - - desert hedgehog [Source:MGI Symbol;Acc:MGI:94891]
25. C79798 ENSMUSG00000084908 1 1 - 1.000 - - - - expressed sequence C79798 [Source:MGI Symbol;Acc:MGI:2139494]
26. Hoxd12 ENSMUSG00000001823 1 1 - - - 1.000 - - homeobox D12 [Source:MGI Symbol;Acc:MGI:96204]
27. Gm12508 ENSMUSG00000081504 11 1 - 1.000 - - - - predicted gene 12508 [Source:MGI Symbol;Acc:MGI:3651359]
28. AB124611 ENSMUSG00000057191 59 1 - 1.000 - - - - cDNA sequence AB124611 [Source:MGI Symbol;Acc:MGI:3043001]
29. Ppp1r1b ENSMUSG00000061718 2 1 - 1.000 - - - - protein phosphatase 1, regulatory inhibitor subunit 1B [Source:MGI Symbol;Acc:MGI:94860]
30. Flg ENSMUSG00000102439 1 1 - 1.000 - - - - filaggrin [Source:MGI Symbol;Acc:MGI:95553]
31. Gm22618 ENSMUSG00000095857 1 1 - - - 1.000 - - predicted gene, 22618 [Source:MGI Symbol;Acc:MGI:5452395]
32. Rpl31-ps20 ENSMUSG00000058607 7 1 - 1.000 - - - - ribosomal protein L31, pseudogene 20 [Source:MGI Symbol;Acc:MGI:3644512]
33. Atf7 ENSMUSG00000099083 1 1 - - - 1.000 - - activating transcription factor 7 [Source:MGI Symbol;Acc:MGI:2443472]
34. Wfdc13 ENSMUSG00000067704 4 1 - - - 1.000 - - WAP four-disulfide core domain 13 [Source:MGI Symbol;Acc:MGI:3582777]
35. Gm5479 ENSMUSG00000044697 3 1 - - 1.000 - - - predicted gene 5479 [Source:MGI Symbol;Acc:MGI:3643380]
36. Zg16 ENSMUSG00000049350 2 1 - 1.000 - - - - zymogen granule protein 16 [Source:MGI Symbol;Acc:MGI:1916286]
37. Akr1b7 ENSMUSG00000052131 2 1 - - - 1.000 - - aldo-keto reductase family 1, member B7 [Source:MGI Symbol;Acc:MGI:101918]
38. Gm454 ENSMUSG00000089783 1 1 - - - 1.000 - - predicted gene 454 [Source:MGI Symbol;Acc:MGI:2685300]
39. Pla1a ENSMUSG00000002847 3 1 - - - 1.000 - - phospholipase A1 member A [Source:MGI Symbol;Acc:MGI:1934677]
40. Icam4 ENSMUSG00000001014 9 1 - 1.000 - - - - intercellular adhesion molecule 4, Landsteiner-Wiener blood group [Source:MGI Symbol;Acc:MGI:1925619]
41. Gm4975 Gm4975 3 1 - 1.000 - - - -
42. Ccdc116 ENSMUSG00000022768 8 1 - - - 1.000 - - coiled-coil domain containing 116 [Source:MGI Symbol;Acc:MGI:1924122]
43. Gm15999 ENSMUSG00000086557 3 1 - 1.000 - - - - predicted gene 15999 [Source:MGI Symbol;Acc:MGI:3802103]
44. Gm9930 ENSMUSG00000053980 10 1 - - 1.000 - - - predicted gene 9930 [Source:MGI Symbol;Acc:MGI:3642400]
45. Ceacam10 ENSMUSG00000054169 3 1 - 1.000 - - - - carcinoembryonic antigen-related cell adhesion molecule 10 [Source:MGI Symbol;Acc:MGI:1347248]
46. Gm13359 ENSMUSG00000082951 3 1 - 1.000 - - - - predicted gene 13359 [Source:MGI Symbol;Acc:MGI:3651940]
47. Gm20522 ENSMUSG00000092241 11 1 - 1.000 - - - - predicted gene 20522 [Source:MGI Symbol;Acc:MGI:5141987]
48. Tm4sf4 ENSMUSG00000027801 7 1 - - - 1.000 - - transmembrane 4 superfamily member 4 [Source:MGI Symbol;Acc:MGI:2385173]
49. Hist1h4n ENSMUSG00000069305 13 1 - 1.000 - - - - histone cluster 1, H4n [Source:MGI Symbol;Acc:MGI:4843992]
50. 4933405L10Rik ENSMUSG00000013158 5 1 - 1.000 - - - - RIKEN cDNA 4933405L10 gene [Source:MGI Symbol;Acc:MGI:1918296]
51. Gm11512 ENSMUSG00000081043 1 1 - 1.000 - - - - predicted gene 11512 [Source:MGI Symbol;Acc:MGI:3649366]
52. Pabpc2 ENSMUSG00000051732 2 1 - 1.000 - - - - poly(A) binding protein, cytoplasmic 2 [Source:MGI Symbol;Acc:MGI:1349723]
53. Klb ENSMUSG00000029195 3 1 - - - 1.000 - - klotho beta [Source:MGI Symbol;Acc:MGI:1932466]
54. Stk32c ENSMUSG00000015981, ENSMUSG00000111536 5 1 - 1.000 - - - - serine/threonine kinase 32C [Source:MGI Symbol;Acc:MGI:2385336]
55. Gm4609 ENSMUSG00000078592 1 1 - 1.000 - - - - predicted gene 4609 [Source:MGI Symbol;Acc:MGI:3782792]
56. D030040B21Rik ENSMUSG00000097744 3 1 - 1.000 - - - - RIKEN cDNA D030040B21 gene [Source:MGI Symbol;Acc:MGI:4437728]
57. Gm15107 ENSMUSG00000072930 1 1 - - - 1.000 - - predicted gene 15107 [Source:MGI Symbol;Acc:MGI:3713328]
58. Acot3 ENSMUSG00000021228 4 1 - - - 1.000 - - acyl-CoA thioesterase 3 [Source:MGI Symbol;Acc:MGI:2159619]
59. Miox ENSMUSG00000022613 1 1 - - - 1.000 - - myo-inositol oxygenase [Source:MGI Symbol;Acc:MGI:1891725]
60. Mos ENSMUSG00000078365 9 1 - - 1.000 - - - Moloney sarcoma oncogene [Source:MGI Symbol;Acc:MGI:97052]
61. Igfals ENSMUSG00000046070 8 1 - - - 1.000 - - insulin-like growth factor binding protein, acid labile subunit [Source:MGI Symbol;Acc:MGI:107973]
62. Otos ENSMUSG00000044055 1 1 - 1.000 - - - - otospiralin [Source:MGI Symbol;Acc:MGI:2672814]
63. Fer1l4 ENSMUSG00000013338 2 1 - 1.000 - - - - fer-1-like 4 (C. elegans) [Source:MGI Symbol;Acc:MGI:1921812]
64. Crx ENSMUSG00000041578 1 1 - 1.000 - - - - cone-rod homeobox [Source:MGI Symbol;Acc:MGI:1194883]
65. Gtf2a1l ENSMUSG00000024154 7 1 - 1.000 - - - - general transcription factor IIA, 1-like [Source:MGI Symbol;Acc:MGI:1919078]
66. C8g ENSMUSG00000015083 11 1 - 1.000 - - - - complement component 8, gamma polypeptide [Source:MGI Symbol;Acc:MGI:88237]
67. BC016579 ENSMUSG00000033187 7 1 - - - 1.000 - - cDNA sequence, BC016579 [Source:MGI Symbol;Acc:MGI:2384848]
68. AI481877 ENSMUSG00000038598 1 1 - 1.000 - - - - expressed sequence AI481877 [Source:MGI Symbol;Acc:MGI:2140313]
69. H2-Q2 ENSMUSG00000091705 41 1 - - - 1.000 - - histocompatibility 2, Q region locus 2 [Source:MGI Symbol;Acc:MGI:95931]
70. F13b ENSMUSG00000026368 1 1 - - - 1.000 - - coagulation factor XIII, beta subunit [Source:MGI Symbol;Acc:MGI:88379]
71. Gm26703 ENSMUSG00000097877 2 1 - 1.000 - - - - predicted gene, 26703 [Source:MGI Symbol;Acc:MGI:5477197]
72. Gm10482 ENSMUSG00000073226 1 1 - 1.000 - - - - predicted gene 10482 [Source:MGI Symbol;Acc:MGI:3644444]
73. B530045E10Rik ENSMUSG00000044633 5 1 - 1.000 - - - - RIKEN cDNA B530045E10 gene [Source:MGI Symbol;Acc:MGI:2445145]
74. Sell ENSMUSG00000026581 6 1 - - - 1.000 - - selectin, lymphocyte [Source:MGI Symbol;Acc:MGI:98279]
75. Gm13688 ENSMUSG00000083284 10 1 - 1.000 - - - - predicted gene 13688 [Source:MGI Symbol;Acc:MGI:3652062]
76. Cdh18 ENSMUSG00000040420 3 1 - - - 1.000 - - cadherin 18 [Source:MGI Symbol;Acc:MGI:1344366]
77. Leng9 ENSMUSG00000043432 15 1 - 1.000 - - - - leukocyte receptor cluster (LRC) member 9 [Source:MGI Symbol;Acc:MGI:2444509]
78. Ms4a3 ENSMUSG00000024681 1 1 - - - 1.000 - - membrane-spanning 4-domains, subfamily A, member 3 [Source:MGI Symbol;Acc:MGI:2158468]
79. Gm16288 ENSMUSG00000085099 7 1 - 1.000 - - - - predicted gene 16288 [Source:MGI Symbol;Acc:MGI:3826608]
80. Gemin4 ENSMUSG00000049396 11 1 - - - 1.000 - - gem nuclear organelle associated protein 4 [Source:MGI Symbol;Acc:MGI:2449313]
81. 4933440M02Rik ENSMUSG00000045928 3 1 - 1.000 - - - - RIKEN cDNA 4933440M02 gene [Source:MGI Symbol;Acc:MGI:1918458]
82. Gm4804 ENSMUSG00000098158 7 1 - 1.000 - - - - predicted gene 4804 [Source:MGI Symbol;Acc:MGI:3646648]
83. Wdfy2 ENSMUSG00000014547 15 1 - 1.000 - - - - WD repeat and FYVE domain containing 2 [Source:MGI Symbol;Acc:MGI:2442811]
84. Ccdc88b ENSMUSG00000047810 3 1 - - - 1.000 - - coiled-coil domain containing 88B [Source:MGI Symbol;Acc:MGI:1925567]
85. Smim6 ENSMUSG00000075420 6 1 - 1.000 - - - - small integral membrane protein 6 [Source:MGI Symbol;Acc:MGI:1915778]
86. Vmn2r-ps19 ENSMUSG00000093975 1 1 - - - 1.000 - - vomeronasal 2, receptor, pseudogene 19 [Source:MGI Symbol;Acc:MGI:3761374]
87. Rps12-ps17 ENSMUSG00000095137 1 1 - 1.000 - - - - ribosomal protein S12, pseudogene 17 [Source:MGI Symbol;Acc:MGI:3643968]
88. Sox30 ENSMUSG00000040489 7 0.945 - - 0.945 - - - SRY (sex determining region Y)-box 30 [Source:MGI Symbol;Acc:MGI:1341157]
89. Abhd15 ENSMUSG00000000686 12 0.924 - 0.924 - - - - abhydrolase domain containing 15 [Source:MGI Symbol;Acc:MGI:1914727]
90. Prtn3 ENSMUSG00000057729 200 0.91 - - - 0.910 - - proteinase 3 [Source:MGI Symbol;Acc:MGI:893580]
91. Gm13140 ENSMUSG00000083027 46 0.901 - - 0.901 - - - predicted gene 13140 [Source:MGI Symbol;Acc:MGI:3649297]
92. Gm16025 ENSMUSG00000089652 2 0.88 - - 0.880 - - - predicted gene 16025 [Source:MGI Symbol;Acc:MGI:3802144]
93. Cd19 ENSMUSG00000030724 1 0.88 - - 0.880 - - - CD19 antigen [Source:MGI Symbol;Acc:MGI:88319]
94. Atp12a ENSMUSG00000022229 2 0.88 - - 0.880 - - - ATPase, H+/K+ transporting, nongastric, alpha polypeptide [Source:MGI Symbol;Acc:MGI:1926943]
95. Clec4n ENSMUSG00000023349 4 0.88 - - 0.880 - - - C-type lectin domain family 4, member n [Source:MGI Symbol;Acc:MGI:1861231]
96. Gm11523 ENSMUSG00000087117 0 0.88 - - 0.880 - - - predicted gene 11523 [Source:MGI Symbol;Acc:MGI:3651808]
97. Gm24451 ENSMUSG00000065287 57 0.88 - - 0.880 - - - predicted gene, 24451 [Source:MGI Symbol;Acc:MGI:5454228]
98. Gm15775 ENSMUSG00000089820 5 0.88 - - 0.880 - - - predicted gene 15775 [Source:MGI Symbol;Acc:MGI:3783216]
99. Gm15880 ENSMUSG00000084821 3 0.88 - - 0.880 - - - predicted gene 15880 [Source:MGI Symbol;Acc:MGI:3802014]
100. Gm26911 ENSMUSG00000097834 7 0.88 - - 0.880 - - - predicted gene, 26911 [Source:MGI Symbol;Acc:MGI:5477405]

There are 155 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA