Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Hmgb1-ps2

Gene Name Gene ID Reads Annotation
Hmgb1-ps2 ENSMUSG00000081738 1 high mobility group box 1, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3768537]







Genes with expression patterns similar to Hmgb1-ps2

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Hmgb1-ps2 ENSMUSG00000081738 1 2 - 1.000 1.000 - - - high mobility group box 1, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3768537]
2. Gdf3 ENSMUSG00000030117 21 1 - - 1.000 - - - growth differentiation factor 3 [Source:MGI Symbol;Acc:MGI:95686]
3. Myh7b ENSMUSG00000074652 24 1 - - 1.000 - - - myosin, heavy chain 7B, cardiac muscle, beta [Source:MGI Symbol;Acc:MGI:3710243]
4. Vax2 ENSMUSG00000034777 0 1 - - 1.000 - - - ventral anterior homeobox 2 [Source:MGI Symbol;Acc:MGI:1346018]
5. 4930507D05Rik ENSMUSG00000097129 15 1 - 1.000 - - - - RIKEN cDNA 4930507D05 gene [Source:MGI Symbol;Acc:MGI:1921956]
6. Gm24436 ENSMUSG00000088514 2 1 - 1.000 - - - - predicted gene, 24436 [Source:MGI Symbol;Acc:MGI:5454213]
7. Gm25636 ENSMUSG00000064600 3 1 - - 1.000 - - - predicted gene, 25636 [Source:MGI Symbol;Acc:MGI:5455413]
8. Dmgdh ENSMUSG00000042102 5 1 - 1.000 - - - - dimethylglycine dehydrogenase precursor [Source:MGI Symbol;Acc:MGI:1921379]
9. Lrriq3 ENSMUSG00000028182 5 1 - - 1.000 - - - leucine-rich repeats and IQ motif containing 3 [Source:MGI Symbol;Acc:MGI:1921685]
10. Chi3l1 Chi3l1 5 1 - 1.000 - - - -
11. Gm10935 Gm10935 1 1 - 1.000 - - - -
12. Mir503 ENSMUSG00000076122 3 1 - - 1.000 - - - microRNA 503 [Source:MGI Symbol;Acc:MGI:3619428]
13. Gm12271 ENSMUSG00000082032 1 1 - 1.000 - - - - predicted gene 12271 [Source:MGI Symbol;Acc:MGI:3650794]
14. Csmd2 ENSMUSG00000028804 32 1 - 1.000 - - - - CUB and Sushi multiple domains 2 [Source:MGI Symbol;Acc:MGI:2386401]
15. Gnb5 ENSMUSG00000032192 6 1 - - 1.000 - - - guanine nucleotide binding protein (G protein), beta 5 [Source:MGI Symbol;Acc:MGI:101848]
16. Gm10113 ENSMUSG00000062282 1 1 - 1.000 - - - - predicted gene 10113 [Source:MGI Symbol;Acc:MGI:3642714]
17. 4930558K02Rik ENSMUSG00000086277 5 1 - - 1.000 - - - RIKEN cDNA 4930558K02 gene [Source:MGI Symbol;Acc:MGI:1922618]
18. Gm15011 ENSMUSG00000081374 1 1 - - 1.000 - - - predicted gene 15011 [Source:MGI Symbol;Acc:MGI:3705394]
19. Bdkrb1 ENSMUSG00000041347 4 1 - 1.000 - - - - bradykinin receptor, beta 1 [Source:MGI Symbol;Acc:MGI:88144]
20. Gm14541 ENSMUSG00000084265 6 1 - 1.000 - - - - predicted gene 14541 [Source:MGI Symbol;Acc:MGI:3709642]
21. Gjc2 ENSMUSG00000043448 6 1 - - 1.000 - - - gap junction protein, gamma 2 [Source:MGI Symbol;Acc:MGI:2153060]
22. Mir3063 ENSMUSG00000093358 1 1 - - 1.000 - - - microRNA 3063 [Source:MGI Symbol;Acc:MGI:4834235]
23. 1600014C23Rik ENSMUSG00000094690 35 1 - - 1.000 - - - RIKEN cDNA 1600014C23 gene [Source:MGI Symbol;Acc:MGI:1919490]
24. Rnf138rt1 ENSMUSG00000083695 3 1 - 1.000 - - - - ring finger protein 138, retrogene 1 [Source:MGI Symbol;Acc:MGI:1921514]
25. Gm13238 ENSMUSG00000096233 1 1 - - 1.000 - - - predicted gene 13238 [Source:MGI Symbol;Acc:MGI:3652104]
26. Hist1h2br ENSMUSG00000069303 0 1 - - 1.000 - - - histone cluster 1 H2br [Source:MGI Symbol;Acc:MGI:3710645]
27. Gm23817 ENSMUSG00000089074 4 1 - 1.000 - - - - predicted gene, 23817 [Source:MGI Symbol;Acc:MGI:5453594]
28. Btg3 ENSMUSG00000022863 18 1 - 1.000 - - - - B cell translocation gene 3 [Source:MGI Symbol;Acc:MGI:109532]
29. Gm22488 ENSMUSG00000080461, ENSMUSG00000116476 2 1 - - 1.000 - - - predicted gene, 22488 [Source:MGI Symbol;Acc:MGI:5452265]
30. AW112010 ENSMUSG00000075010 0 1 - - 1.000 - - - expressed sequence AW112010 [Source:MGI Symbol;Acc:MGI:2147706]
31. Gm26884 ENSMUSG00000097128 12 1 - - 1.000 - - - predicted gene, 26884 [Source:MGI Symbol;Acc:MGI:5477378]
32. Arhgef37 ENSMUSG00000045094 0 1 - - 1.000 - - - Rho guanine nucleotide exchange factor (GEF) 37 [Source:MGI Symbol;Acc:MGI:3045339]
33. Mical1 ENSMUSG00000019823 14 1 - 1.000 - - - - microtubule associated monooxygenase, calponin and LIM domain containing 1 [Source:MGI Symbol;Acc:MGI:2385847]
34. Pabpc6 ENSMUSG00000046173 3 1 - - 1.000 - - - poly(A) binding protein, cytoplasmic 6 [Source:MGI Symbol;Acc:MGI:1914793]
35. Gm3625 ENSMUSG00000091619 1 1 - 1.000 - - - - predicted gene 3625 [Source:MGI Symbol;Acc:MGI:3781801]
36. 4930555B11Rik ENSMUSG00000086396 2 1 - 1.000 - - - - RIKEN cDNA 4930555B11 gene [Source:MGI Symbol;Acc:MGI:1922529]
37. Tuba8 ENSMUSG00000030137 2 1 - - 1.000 - - - tubulin, alpha 8 [Source:MGI Symbol;Acc:MGI:1858225]
38. B230209K01Rik B230209K01Rik 4 1 - - 1.000 - - -
39. Il5ra ENSMUSG00000005364 4 1 - - 1.000 - - - interleukin 5 receptor, alpha [Source:MGI Symbol;Acc:MGI:96558]
40. Gm13582 ENSMUSG00000075325 1 1 - - 1.000 - - - predicted gene 13582 [Source:MGI Symbol;Acc:MGI:3642495]
41. 4931440F15Rik ENSMUSG00000078157 2 1 - - 1.000 - - - RIKEN cDNA 4931440F15 gene [Source:MGI Symbol;Acc:MGI:2441689]
42. Selp ENSMUSG00000026580 4 1 - 1.000 - - - - selectin, platelet [Source:MGI Symbol;Acc:MGI:98280]
43. Gm7985 ENSMUSG00000098224 0 1 - - 1.000 - - - predicted gene 7985 [Source:MGI Symbol;Acc:MGI:3645837]
44. Gm6039 ENSMUSG00000083736 1 1 - 1.000 - - - - predicted gene 6039 [Source:MGI Symbol;Acc:MGI:3648055]
45. Gm13381 ENSMUSG00000087667 0 1 - - 1.000 - - - predicted gene 13381 [Source:MGI Symbol;Acc:MGI:3649650]
46. Gm16439 ENSMUSG00000072594 3 1 - - 1.000 - - - predicted pseudogene 16439 [Source:MGI Symbol;Acc:MGI:3647611]
47. Gm14168 ENSMUSG00000055494 6 1 - 1.000 - - - - predicted gene 14168 [Source:MGI Symbol;Acc:MGI:3651463]
48. Cmtm2a ENSMUSG00000074127 8 1 - - 1.000 - - - CKLF-like MARVEL transmembrane domain containing 2A [Source:MGI Symbol;Acc:MGI:2447160]
49. Gm20507 ENSMUSG00000092412 1 1 - 1.000 - - - - predicted gene 20507 [Source:MGI Symbol;Acc:MGI:5141972]
50. Fam83f ENSMUSG00000022408 5 1 - 1.000 - - - - family with sequence similarity 83, member F [Source:MGI Symbol;Acc:MGI:2146227]
51. Gm12186 ENSMUSG00000084153 4 1 - 1.000 - - - - predicted gene 12186 [Source:MGI Symbol;Acc:MGI:3649200]
52. Gm12183 ENSMUSG00000082454 8 1 - 1.000 - - - - predicted gene 12183 [Source:MGI Symbol;Acc:MGI:3652175]
53. Rps12-ps3 ENSMUSG00000067038 9 1 - 1.000 - - - - ribosomal protein S12, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3704503]
54. 4930550C17Rik ENSMUSG00000097361 1 1 - 1.000 - - - - RIKEN cDNA 4930550C17 gene [Source:MGI Symbol;Acc:MGI:1922495]
55. Tfap2e ENSMUSG00000042477 4 1 - - 1.000 - - - transcription factor AP-2, epsilon [Source:MGI Symbol;Acc:MGI:2679630]
56. Gm10709 ENSMUSG00000074516 18 1 - 1.000 - - - - predicted gene 10709 [Source:MGI Symbol;Acc:MGI:3642754]
57. Gm8566 ENSMUSG00000047905 10 1 - 1.000 - - - - predicted pseudogene 8566 [Source:MGI Symbol;Acc:MGI:3647296]
58. Rpl36-ps10 ENSMUSG00000084186 0 1 - - 1.000 - - - ribosomal protein L36, pseudogene 10 [Source:MGI Symbol;Acc:MGI:3645166]
59. Krt6a ENSMUSG00000058354 1 1 - - 1.000 - - - keratin 6A [Source:MGI Symbol;Acc:MGI:1100845]
60. Egfem1 ENSMUSG00000063600 71 0.975 - 0.975 - - - - EGF-like and EMI domain containing 1 [Source:MGI Symbol;Acc:MGI:1922990]
61. Gm12094 ENSMUSG00000080851 3 0.943 - - 0.943 - - - predicted gene 12094 [Source:MGI Symbol;Acc:MGI:3650094]
62. Dmrt3 ENSMUSG00000042372 26 0.92 - 0.920 - - - - doublesex and mab-3 related transcription factor 3 [Source:MGI Symbol;Acc:MGI:2449470]
63. Hmx1 ENSMUSG00000067438 72 0.919 - 0.919 - - - - H6 homeobox 1 [Source:MGI Symbol;Acc:MGI:107178]
64. Gm5687 ENSMUSG00000080866 21 0.892 - - 0.892 - - - predicted gene 5687 [Source:MGI Symbol;Acc:MGI:3644274]
65. Gm4258 ENSMUSG00000098243 99 0.887 - - 0.887 - - - predicted gene 4258 [Source:MGI Symbol;Acc:MGI:3782435]
66. Gm5124 ENSMUSG00000051537 12 0.886 - - 0.886 - - - predicted pseudogene 5124 [Source:MGI Symbol;Acc:MGI:3643622]
67. H2-DMb1 ENSMUSG00000079547 2 0.886 - - 0.886 - - - histocompatibility 2, class II, locus Mb1 [Source:MGI Symbol;Acc:MGI:95922]
68. Iqsec3 ENSMUSG00000040797 23 0.886 - - 0.886 - - - IQ motif and Sec7 domain 3 [Source:MGI Symbol;Acc:MGI:2677208]
69. Gm15773 ENSMUSG00000082872 27 0.876 - - 0.876 - - - predicted gene 15773 [Source:MGI Symbol;Acc:MGI:3783214]
70. Syndig1 ENSMUSG00000074736 24 0.864 - - 0.864 - - - synapse differentiation inducing 1 [Source:MGI Symbol;Acc:MGI:3702158]
71. Gm12002 ENSMUSG00000086584 11 0.863 - - 0.863 - - - predicted gene 12002 [Source:MGI Symbol;Acc:MGI:3651521]
72. Gm14636 ENSMUSG00000073274 22 0.863 - - 0.863 - - - predicted gene 14636 [Source:MGI Symbol;Acc:MGI:3641976]
73. Gm17678 Gm17678 2 0.847 - - 0.847 - - -
74. Gm22270 ENSMUSG00000077222 4 0.838 - - 0.838 - - - predicted gene, 22270 [Source:MGI Symbol;Acc:MGI:5452047]
75. Lax1 ENSMUSG00000051998 27 0.82 - - 0.820 - - - lymphocyte transmembrane adaptor 1 [Source:MGI Symbol;Acc:MGI:2443362]
76. Gm12827 ENSMUSG00000087228 2 0.82 - - 0.820 - - - predicted gene 12827 [Source:MGI Symbol;Acc:MGI:3651358]
77. Ribc2 ENSMUSG00000022431 3 0.82 - - 0.820 - - - RIB43A domain with coiled-coils 2 [Source:MGI Symbol;Acc:MGI:1914997]
78. Stap1 ENSMUSG00000029254 13 0.82 - - 0.820 - - - signal transducing adaptor family member 1 [Source:MGI Symbol;Acc:MGI:1926193]
79. Gabrr2 ENSMUSG00000023267 15 0.82 - - 0.820 - - - gamma-aminobutyric acid (GABA) C receptor, subunit rho 2 [Source:MGI Symbol;Acc:MGI:95626]
80. Tnxb ENSMUSG00000033327 0 0.82 - - 0.820 - - - tenascin XB [Source:MGI Symbol;Acc:MGI:1932137]
81. Tifab ENSMUSG00000049625 21 0.818 - 0.818 - - - - TRAF-interacting protein with forkhead-associated domain, family member B [Source:MGI Symbol;Acc:MGI:2385852]
82. Aqp6 ENSMUSG00000043144 3 0.818 - - 0.818 - - - aquaporin 6 [Source:MGI Symbol;Acc:MGI:1341204]
83. Skor1 ENSMUSG00000022245 61 0.816 - 0.816 - - - - SKI family transcriptional corepressor 1 [Source:MGI Symbol;Acc:MGI:2443473]
84. RP24-176F12.8 RP24-176F12.8 8 0.815 - - 0.815 - - -
85. 2310065F04Rik ENSMUSG00000087410 10 0.814 - - 0.814 - - - RIKEN cDNA 2310065F04 gene [Source:MGI Symbol;Acc:MGI:1921434]
86. Gpr3 ENSMUSG00000049649 12 0.814 - - 0.814 - - - G-protein coupled receptor 3 [Source:MGI Symbol;Acc:MGI:101908]
87. A730085A09Rik A730085A09Rik 14 0.812 - 0.812 - - - -
88. Gm5544 ENSMUSG00000074388 8 0.806 - - 0.806 - - - predicted gene 5544 [Source:MGI Symbol;Acc:MGI:3648209]
89. A430105J06Rik ENSMUSG00000097784 12 0.794 - 0.794 - - - - RIKEN cDNA A430105J06 gene [Source:MGI Symbol;Acc:MGI:1924439]
90. Cd300lg ENSMUSG00000017309 7 0.793 - - 0.793 - - - CD300 molecule like family member G [Source:MGI Symbol;Acc:MGI:1289168]
91. Gm7611 ENSMUSG00000097951 1 0.793 - - 0.793 - - - predicted gene 7611 [Source:MGI Symbol;Acc:MGI:3647727]
92. 1300002K09Rik 1300002K09Rik 75 0.782 - 0.782 - - - -
93. Fam107a ENSMUSG00000021750 50 0.781 - - 0.781 - - - family with sequence similarity 107, member A [Source:MGI Symbol;Acc:MGI:3041256]
94. Gm7334 ENSMUSG00000044645 3 0.779 - - 0.779 - - - predicted gene 7334 [Source:MGI Symbol;Acc:MGI:3647393]
95. Gm16241 Gm16241 10 0.779 - - 0.779 - - -
96. Gm26631 ENSMUSG00000097445 22 0.777 - 0.777 - - - - predicted gene, 26631 [Source:MGI Symbol;Acc:MGI:5477125]
97. Gm15491 ENSMUSG00000087367 3 0.777 - 0.777 - - - - predicted gene 15491 [Source:MGI Symbol;Acc:MGI:3782937]
98. 1700112J16Rik ENSMUSG00000097527 5 0.777 - 0.777 - - - - RIKEN cDNA 1700112J16 gene [Source:MGI Symbol;Acc:MGI:1923878]
99. Arc ENSMUSG00000022602 25 0.774 - - 0.774 - - - activity regulated cytoskeletal-associated protein [Source:MGI Symbol;Acc:MGI:88067]
100. 4930579K19Rik ENSMUSG00000051074 42 0.77 - 0.770 - - - - RIKEN cDNA 4930579K19 gene [Source:MGI Symbol;Acc:MGI:1923131]

There are 33 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA