Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Gm5898

Gene Name Gene ID Reads Annotation
Gm5898 ENSMUSG00000081788 45 predicted gene 5898 [Source:MGI Symbol;Acc:MGI:3644921]







Genes with expression patterns similar to Gm5898

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Gm5898 ENSMUSG00000081788 45 4 1.000 1.000 1.000 1.000 - - predicted gene 5898 [Source:MGI Symbol;Acc:MGI:3644921]
2. Gm12295 ENSMUSG00000085162 3 1.748 - 0.835 0.913 - - - predicted gene 12295 [Source:MGI Symbol;Acc:MGI:3650535]
3. Cngb1 ENSMUSG00000031789 4 0.942 - - 0.942 - - - cyclic nucleotide gated channel beta 1 [Source:MGI Symbol;Acc:MGI:2664102]
4. Sprtn ENSMUSG00000031986 4 0.936 - - 0.936 - - - SprT-like N-terminal domain [Source:MGI Symbol;Acc:MGI:2685351]
5. Gm26771 ENSMUSG00000097250 8 0.926 - - 0.926 - - - predicted gene, 26771 [Source:MGI Symbol;Acc:MGI:5477265]
6. Pirb ENSMUSG00000058818 16 0.92 - - 0.920 - - - paired Ig-like receptor B [Source:MGI Symbol;Acc:MGI:894311]
7. Lrrc25 ENSMUSG00000049988 4 0.917 - - 0.917 - - - leucine rich repeat containing 25 [Source:MGI Symbol;Acc:MGI:2445284]
8. Hcrtr2 ENSMUSG00000032360 19 0.917 - - 0.917 - - - hypocretin (orexin) receptor 2 [Source:MGI Symbol;Acc:MGI:2680765]
9. Fcna ENSMUSG00000026938 10 0.917 - - 0.917 - - - ficolin A [Source:MGI Symbol;Acc:MGI:1340905]
10. Gm7416 ENSMUSG00000084031 7 0.915 - - 0.915 - - - predicted gene 7416 [Source:MGI Symbol;Acc:MGI:3647901]
11. Slc11a1 ENSMUSG00000026177 34 0.915 - - 0.915 - - - solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 [Source:MGI Symbol;Acc:MGI:1345275]
12. Gm14951 ENSMUSG00000084776 22 0.913 - - 0.913 - - - predicted gene 14951 [Source:MGI Symbol;Acc:MGI:3705251]
13. 2310042E22Rik 2310042E22Rik 17 0.913 - - 0.913 - - -
14. Ugt3a2 ENSMUSG00000049152 5 0.913 - - 0.913 - - - UDP glycosyltransferases 3 family, polypeptide A2 [Source:MGI Symbol;Acc:MGI:2145969]
15. Gm25541 ENSMUSG00000080538 21 0.913 - - 0.913 - - - predicted gene, 25541 [Source:MGI Symbol;Acc:MGI:5455318]
16. Gm773 ENSMUSG00000073177 2 0.913 - - 0.913 - - - predicted gene 773 [Source:MGI Symbol;Acc:MGI:2685619]
17. Gm22257 ENSMUSG00000089312 2 0.913 - - 0.913 - - - predicted gene, 22257 [Source:MGI Symbol;Acc:MGI:5452034]
18. Dupd1 ENSMUSG00000063821 7 0.913 - - 0.913 - - - dual specificity phosphatase and pro isomerase domain containing 1 [Source:MGI Symbol;Acc:MGI:3647127]
19. Gm11370 ENSMUSG00000081905 2 0.913 - - 0.913 - - - predicted gene 11370 [Source:MGI Symbol;Acc:MGI:3651832]
20. 1700057H21Rik ENSMUSG00000086007 2 0.913 - - 0.913 - - - RIKEN cDNA 1700057H21 gene [Source:MGI Symbol;Acc:MGI:1920625]
21. Prl8a6 ENSMUSG00000021345 4 0.913 - - 0.913 - - - prolactin family 8, subfamily a, member 6 [Source:MGI Symbol;Acc:MGI:1332225]
22. Gm20628 ENSMUSG00000093656 3 0.913 - - 0.913 - - - predicted gene 20628 [Source:MGI Symbol;Acc:MGI:5313075]
23. Hpgds ENSMUSG00000029919 68 0.911 - - 0.911 - - - hematopoietic prostaglandin D synthase [Source:MGI Symbol;Acc:MGI:1859384]
24. 2010015L04Rik 2010015L04Rik 37 0.907 - - 0.907 - - -
25. Cxcl1 ENSMUSG00000029380 4 0.907 - - 0.907 - - - chemokine (C-X-C motif) ligand 1 [Source:MGI Symbol;Acc:MGI:108068]
26. Gm25789 ENSMUSG00000065228 22 0.906 - - 0.906 - - - predicted gene, 25789 [Source:MGI Symbol;Acc:MGI:5455566]
27. Gm25520 ENSMUSG00000089014 14 0.906 - - 0.906 - - - predicted gene, 25520 [Source:MGI Symbol;Acc:MGI:5455297]
28. Gm13056 ENSMUSG00000085395 13 0.906 - - 0.906 - - - predicted gene 13056 [Source:MGI Symbol;Acc:MGI:3650725]
29. Npas4 ENSMUSG00000045903 62 0.902 - - 0.902 - - - neuronal PAS domain protein 4 [Source:MGI Symbol;Acc:MGI:2664186]
30. 9930013L23Rik 9930013L23Rik 21 0.894 - - 0.894 - - -
31. Trib3 ENSMUSG00000032715 37 0.894 - - 0.894 - - - tribbles pseudokinase 3 [Source:MGI Symbol;Acc:MGI:1345675]
32. Cox6b2 ENSMUSG00000051811 121 0.891 - - 0.891 - - - cytochrome c oxidase subunit 6B2 [Source:MGI Symbol;Acc:MGI:3044182]
33. Syt12 ENSMUSG00000049303 17 0.891 - - 0.891 - - - synaptotagmin XII [Source:MGI Symbol;Acc:MGI:2159601]
34. Popdc3 ENSMUSG00000019848 48 0.89 - - 0.890 - - - popeye domain containing 3 [Source:MGI Symbol;Acc:MGI:1930153]
35. Bmp5 ENSMUSG00000032179 12 0.889 - - 0.889 - - - bone morphogenetic protein 5 [Source:MGI Symbol;Acc:MGI:88181]
36. Ptpn22 ENSMUSG00000027843 17 0.888 - - 0.888 - - - protein tyrosine phosphatase, non-receptor type 22 (lymphoid) [Source:MGI Symbol;Acc:MGI:107170]
37. Pi4kb ENSMUSG00000038861 97 0.887 - - 0.887 - - - phosphatidylinositol 4-kinase beta [Source:MGI Symbol;Acc:MGI:1334433]
38. RP24-325L16.1 RP24-325L16.1 31 0.887 - - 0.887 - - -
39. Crhbp ENSMUSG00000021680 29 0.887 - - 0.887 - - - corticotropin releasing hormone binding protein [Source:MGI Symbol;Acc:MGI:88497]
40. Gpr35 ENSMUSG00000026271 17 0.885 - - 0.885 - - - G protein-coupled receptor 35 [Source:MGI Symbol;Acc:MGI:1929509]
41. Gm26721 ENSMUSG00000096943 22 0.881 - - 0.881 - - - predicted gene, 26721 [Source:MGI Symbol;Acc:MGI:5477215]
42. Gm20663 ENSMUSG00000093378 49 0.88 - - 0.880 - - - predicted gene 20663 [Source:MGI Symbol;Acc:MGI:5313110]
43. Lama3 ENSMUSG00000024421 55 0.879 - - 0.879 - - - laminin, alpha 3 [Source:MGI Symbol;Acc:MGI:99909]
44. Tc2n ENSMUSG00000021187 51 0.879 - - 0.879 - - - tandem C2 domains, nuclear [Source:MGI Symbol;Acc:MGI:1921663]
45. Rasal3 ENSMUSG00000052142 7 0.878 - - 0.878 - - - RAS protein activator like 3 [Source:MGI Symbol;Acc:MGI:2444128]
46. Snph ENSMUSG00000027457 95 0.87 - - 0.870 - - - syntaphilin [Source:MGI Symbol;Acc:MGI:2139270]
47. Efcab12 ENSMUSG00000030321 63 0.869 - - 0.869 - - - EF-hand calcium binding domain 12 [Source:MGI Symbol;Acc:MGI:2681834]
48. Mettl21e ENSMUSG00000046828 7 0.868 - - 0.868 - - - methyltransferase like 21E [Source:MGI Symbol;Acc:MGI:2685837]
49. Hmgb1-ps3 ENSMUSG00000081455 5 0.867 - - 0.867 - - - high mobility group box 1, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3768539]
50. Thap1 ENSMUSG00000037214 256 0.866 - - 0.866 - - - THAP domain containing, apoptosis associated protein 1 [Source:MGI Symbol;Acc:MGI:1921004]
51. Nod2 ENSMUSG00000055994 12 0.866 - - 0.866 - - - nucleotide-binding oligomerization domain containing 2 [Source:MGI Symbol;Acc:MGI:2429397]
52. Hfm1 ENSMUSG00000043410 75 0.859 - - 0.859 - - - HFM1, ATP-dependent DNA helicase homolog [Source:MGI Symbol;Acc:MGI:3036246]
53. B3gnt9 ENSMUSG00000069920 24 0.859 - - 0.859 - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 [Source:MGI Symbol;Acc:MGI:2142841]
54. Gm27042 ENSMUSG00000097792 33 0.857 - - 0.857 - - - predicted gene, 27042 [Source:MGI Symbol;Acc:MGI:5504157]
55. Gm4787 ENSMUSG00000072974 15 0.856 - - 0.856 - - - predicted gene 4787 [Source:MGI Symbol;Acc:MGI:3646380]
56. 4930570G19Rik ENSMUSG00000085084 34 0.855 - - 0.855 - - - RIKEN cDNA 4930570G19 gene [Source:MGI Symbol;Acc:MGI:1923158]
57. Gm11645 ENSMUSG00000080895 26 0.853 - - 0.853 - - - predicted gene 11645 [Source:MGI Symbol;Acc:MGI:3652133]
58. Gm14680 145 0.851 - - 0.851 - - - predicted gene 14680
59. Gm13657 ENSMUSG00000086813 15 0.85 - - 0.850 - - - predicted gene 13657 [Source:MGI Symbol;Acc:MGI:3650031]
60. Msc ENSMUSG00000025930 30 0.847 - - 0.847 - - - musculin [Source:MGI Symbol;Acc:MGI:1333884]
61. Lrrc73 ENSMUSG00000071073 18 0.846 - - 0.846 - - - leucine rich repeat containing 73 [Source:MGI Symbol;Acc:MGI:2684934]
62. Clec7a ENSMUSG00000079293 35 0.846 - - 0.846 - - - C-type lectin domain family 7, member a [Source:MGI Symbol;Acc:MGI:1861431]
63. Steap3 ENSMUSG00000026389 20 0.841 - - 0.841 - - - STEAP family member 3 [Source:MGI Symbol;Acc:MGI:1915678]
64. D130040H23Rik ENSMUSG00000079038 18 0.84 - - 0.840 - - - RIKEN cDNA D130040H23 gene [Source:MGI Symbol;Acc:MGI:2444324]
65. Ms4a6d ENSMUSG00000024679 33 0.84 - - 0.840 - - - membrane-spanning 4-domains, subfamily A, member 6D [Source:MGI Symbol;Acc:MGI:1916024]
66. Tmigd1 ENSMUSG00000020839 18 0.837 - - 0.837 - - - transmembrane and immunoglobulin domain containing 1 [Source:MGI Symbol;Acc:MGI:1913851]
67. A2m ENSMUSG00000030111 38 0.837 - - 0.837 - - - alpha-2-macroglobulin [Source:MGI Symbol;Acc:MGI:2449119]
68. Cct6b ENSMUSG00000020698 8 0.835 - 0.835 - - - - chaperonin containing Tcp1, subunit 6b (zeta) [Source:MGI Symbol;Acc:MGI:1329013]
69. Hspb3 ENSMUSG00000051456 4 0.835 - 0.835 - - - - heat shock protein 3 [Source:MGI Symbol;Acc:MGI:1928479]
70. Gm20407 ENSMUSG00000092182 2 0.835 - 0.835 - - - - predicted gene 20407 [Source:MGI Symbol;Acc:MGI:5141872]
71. Gm20726 Gm20726 1 0.835 - 0.835 - - - -
72. Htr5a ENSMUSG00000039106 2 0.835 - 0.835 - - - - 5-hydroxytryptamine (serotonin) receptor 5A [Source:MGI Symbol;Acc:MGI:96283]
73. Gm16150 ENSMUSG00000085391 1 0.835 - 0.835 - - - - predicted gene 16150 [Source:MGI Symbol;Acc:MGI:3801827]
74. 1700028K03Rik ENSMUSG00000089798 11 0.835 - 0.835 - - - - RIKEN cDNA 1700028K03 gene [Source:MGI Symbol;Acc:MGI:1923671]
75. Gm26525 ENSMUSG00000096987 2 0.835 - 0.835 - - - - predicted gene, 26525 [Source:MGI Symbol;Acc:MGI:5477019]
76. Ribc2 ENSMUSG00000022431 3 0.835 - 0.835 - - - - RIB43A domain with coiled-coils 2 [Source:MGI Symbol;Acc:MGI:1914997]
77. Gm12292 ENSMUSG00000086490 7 0.835 - 0.835 - - - - predicted gene 12292 [Source:MGI Symbol;Acc:MGI:3649414]
78. Fbxw20 ENSMUSG00000061701 5 0.835 - 0.835 - - - - F-box and WD-40 domain protein 20 [Source:MGI Symbol;Acc:MGI:3584372]
79. Gm12177 Gm12177 1 0.835 - 0.835 - - - -
80. Ighm ENSMUSG00000076617 10 0.835 - 0.835 - - - - immunoglobulin heavy constant mu [Source:MGI Symbol;Acc:MGI:96448]
81. Gm17455 ENSMUSG00000090439 8 0.835 - 0.835 - - - - predicted gene, 17455 [Source:MGI Symbol;Acc:MGI:4937089]
82. Gm20472 ENSMUSG00000092465 1 0.835 - 0.835 - - - - predicted gene 20472 [Source:MGI Symbol;Acc:MGI:5141937]
83. Gm2539 ENSMUSG00000097739 4 0.835 - 0.835 - - - - predicted gene, 2539 [Source:MGI Symbol;Acc:MGI:3780707]
84. Gm26848 ENSMUSG00000097723 1 0.835 - 0.835 - - - - predicted gene, 26848 [Source:MGI Symbol;Acc:MGI:5477342]
85. Slc44a4 ENSMUSG00000007034 1 0.835 - 0.835 - - - - solute carrier family 44, member 4 [Source:MGI Symbol;Acc:MGI:1917379]
86. Slco1a5 ENSMUSG00000063975 3 0.835 - 0.835 - - - - solute carrier organic anion transporter family, member 1a5 [Source:MGI Symbol;Acc:MGI:1351865]
87. Gm25832 ENSMUSG00000077328 1 0.835 - 0.835 - - - - predicted gene, 25832 [Source:MGI Symbol;Acc:MGI:5455609]
88. Gm11854 ENSMUSG00000080919 2 0.835 - 0.835 - - - - predicted gene 11854 [Source:MGI Symbol;Acc:MGI:3651402]
89. Gm8995 ENSMUSG00000063286 6 0.835 - 0.835 - - - - predicted gene 8995 [Source:MGI Symbol;Acc:MGI:3644223]
90. Zfp939 ENSMUSG00000030424 5 0.835 - 0.835 - - - - zinc finger protein 939 [Source:MGI Symbol;Acc:MGI:3036240]
91. Gm26752 ENSMUSG00000097541 1 0.835 - 0.835 - - - - predicted gene, 26752 [Source:MGI Symbol;Acc:MGI:5477246]
92. Cebpa ENSMUSG00000034957 21 0.835 - 0.835 - - - - CCAAT/enhancer binding protein (C/EBP), alpha [Source:MGI Symbol;Acc:MGI:99480]
93. Gm5451 ENSMUSG00000095847 4 0.835 - 0.835 - - - - predicted gene 5451 [Source:MGI Symbol;Acc:MGI:3643790]
94. Drd1a Drd1a 4 0.835 - 0.835 - - - -
95. Lypd3 ENSMUSG00000057454 6 0.835 - 0.835 - - - - Ly6/Plaur domain containing 3 [Source:MGI Symbol;Acc:MGI:1919684]
96. Gm12500 ENSMUSG00000056411 17 0.835 - 0.835 - - - - predicted gene 12500 [Source:MGI Symbol;Acc:MGI:3650304]
97. Gm17056 ENSMUSG00000090387 2 0.835 - 0.835 - - - - predicted gene 17056 [Source:MGI Symbol;Acc:MGI:4937883]
98. Gm11666 Gm11666 2 0.835 - 0.835 - - - -
99. Gm12296 ENSMUSG00000084967 2 0.835 - 0.835 - - - - predicted gene 12296 [Source:MGI Symbol;Acc:MGI:3711946]
100. Gm17477 ENSMUSG00000084917 24 0.835 - 0.835 - - - - predicted gene, 17477 [Source:MGI Symbol;Acc:MGI:4937111]

There are 66 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA