Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Gm5580

Gene Name Gene ID Reads Annotation
Gm5580 ENSMUSG00000107906 10 predicted pseudogene 5580 [Source:MGI Symbol;Acc:MGI:3646594]







Genes with expression patterns similar to Gm5580

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Gm5580 ENSMUSG00000107906 10 6 1.000 1.000 1.000 1.000 1.000 1.000 predicted pseudogene 5580 [Source:MGI Symbol;Acc:MGI:3646594]
2. Gm17337 Gm17337 7 1 - 1.000 - - - -
3. Gm12326 ENSMUSG00000085251 1 1 - 1.000 - - - - predicted gene 12326 [Source:MGI Symbol;Acc:MGI:3651350]
4. Gm11224 ENSMUSG00000084342 1 1 - - - - - 1.000 predicted gene 11224 [Source:MGI Symbol;Acc:MGI:3651640]
5. Gabrp ENSMUSG00000020159 21 1 - 1.000 - - - - gamma-aminobutyric acid (GABA) A receptor, pi [Source:MGI Symbol;Acc:MGI:2387597]
6. Krt25 ENSMUSG00000035831 4 1 - 1.000 - - - - keratin 25 [Source:MGI Symbol;Acc:MGI:1918060]
7. Scp2-ps2 ENSMUSG00000058492 6 1 - 1.000 - - - - sterol carrier protein 2, pseudogene 2 [Source:MGI Symbol;Acc:MGI:107679]
8. Gm12360 Gm12360 1 1 - - - - 1.000 -
9. Gm15718 ENSMUSG00000085663 19 1 - - - - 1.000 - predicted gene 15718 [Source:MGI Symbol;Acc:MGI:3783160]
10. Gm6263 ENSMUSG00000080966 2 1 - 1.000 - - - - predicted gene 6263 [Source:MGI Symbol;Acc:MGI:3646097]
11. Fscn3 ENSMUSG00000029707 4 1 - - - - - 1.000 fascin actin-bundling protein 3 [Source:MGI Symbol;Acc:MGI:1890386]
12. Hcst ENSMUSG00000064109 6 1 - 1.000 - - - - hematopoietic cell signal transducer [Source:MGI Symbol;Acc:MGI:1344360]
13. Nkx2-1 ENSMUSG00000001496 3 1 - - - - - 1.000 NK2 homeobox 1 [Source:MGI Symbol;Acc:MGI:108067]
14. Ppp1r2-ps2 ENSMUSG00000099662 2 1 - 1.000 - - - - protein phosphatase 1, regulatory (inhibitor) subunit 2, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3647847]
15. 1700095B22Rik 1700095B22Rik 1 1 - - - - - 1.000
16. 1700063H04Rik ENSMUSG00000040657 2 1 - - - - 1.000 - RIKEN cDNA 1700063H04 gene [Source:MGI Symbol;Acc:MGI:1921519]
17. 6330409D20Rik ENSMUSG00000009551 7 1 - - - - - 1.000 RIKEN cDNA 6330409D20 gene [Source:MGI Symbol;Acc:MGI:1917980]
18. Fam71a ENSMUSG00000091017 2 1 - 1.000 - - - - family with sequence similarity 71, member A [Source:MGI Symbol;Acc:MGI:3588202]
19. Klri2 ENSMUSG00000043932 8 1 - - - - 1.000 - killer cell lectin-like receptor family I member 2 [Source:MGI Symbol;Acc:MGI:2443965]
20. Gm12412 ENSMUSG00000083685 7 1 - 1.000 - - - - predicted gene 12412 [Source:MGI Symbol;Acc:MGI:3649919]
21. Slc1a1 ENSMUSG00000024935 7 1 - 1.000 - - - - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:MGI Symbol;Acc:MGI:105083]
22. Gm13847 4 1 - - - - 1.000 - predicted gene 13847, transcript variant X4
23. 8430423G03Rik ENSMUSG00000079069 2 1 - - - - 1.000 - RIKEN cDNA 8430423G03 gene [Source:MGI Symbol;Acc:MGI:1918723]
24. Slfnl1 ENSMUSG00000047518 3 1 - - - - 1.000 - schlafen like 1 [Source:MGI Symbol;Acc:MGI:3045330]
25. Gm14385 ENSMUSG00000080158 1 1 - - - - 1.000 - predicted gene 14385 [Source:MGI Symbol;Acc:MGI:3650034]
26. Bglap3 ENSMUSG00000074489 7 1 - - - - 1.000 - bone gamma-carboxyglutamate protein 3 [Source:MGI Symbol;Acc:MGI:88155]
27. Gm5934 ENSMUSG00000084063 3 1 - 1.000 - - - - predicted gene 5934 [Source:MGI Symbol;Acc:MGI:3643862]
28. 1500012K07Rik ENSMUSG00000097247 1 1 - - - - 1.000 - RIKEN cDNA 1500012K07 gene [Source:MGI Symbol;Acc:MGI:1916204]
29. Rps19-ps7 ENSMUSG00000080006 5 1 - - - - - 1.000 ribosomal protein S19, pseudogene 7 [Source:MGI Symbol;Acc:MGI:3652235]
30. Gm25544 ENSMUSG00000084625 2 1 - 1.000 - - - - predicted gene, 25544 [Source:MGI Symbol;Acc:MGI:5455321]
31. Gnat3 ENSMUSG00000028777 6 1 - - - - - 1.000 guanine nucleotide binding protein, alpha transducing 3 [Source:MGI Symbol;Acc:MGI:3588268]
32. Gm17919 ENSMUSG00000092293 1 1 - - - - 1.000 - predicted gene, 17919 [Source:MGI Symbol;Acc:MGI:5010104]
33. Tpo ENSMUSG00000020673 1 1 - - - - - 1.000 thyroid peroxidase [Source:MGI Symbol;Acc:MGI:98813]
34. Armc3 ENSMUSG00000037683 2 1 - 1.000 - - - - armadillo repeat containing 3 [Source:MGI Symbol;Acc:MGI:1918132]
35. Slitrk3 ENSMUSG00000048304 2 1 - - - - - 1.000 SLIT and NTRK-like family, member 3 [Source:MGI Symbol;Acc:MGI:2679447]
36. Lrrc23 ENSMUSG00000030125 5 1 - - - - - 1.000 leucine rich repeat containing 23 [Source:MGI Symbol;Acc:MGI:1315192]
37. Slc22a2 ENSMUSG00000040966 4 1 - 1.000 - - - - solute carrier family 22 (organic cation transporter), member 2 [Source:MGI Symbol;Acc:MGI:1335072]
38. Rnase6 ENSMUSG00000021880 4 1 - - - - - 1.000 ribonuclease, RNase A family, 6 [Source:MGI Symbol;Acc:MGI:1925666]
39. Emr4 Emr4 3 1 - 1.000 - - - -
40. Gm13128 ENSMUSG00000078508 18 1 - - - - - 1.000 predicted gene 13128 [Source:MGI Symbol;Acc:MGI:3651261]
41. Nlrp4e ENSMUSG00000045693 6 1 - - - - - 1.000 NLR family, pyrin domain containing 4E [Source:MGI Symbol;Acc:MGI:3056600]
42. HOXA11-AS1 HOXA11-AS1 1 1 - - - - - 1.000
43. Gm12530 ENSMUSG00000085967 1 1 - - - - - 1.000 predicted gene 12530 [Source:MGI Symbol;Acc:MGI:3651546]
44. Gm24130 ENSMUSG00000089161 1 1 - - - - - 1.000 predicted gene, 24130 [Source:MGI Symbol;Acc:MGI:5453907]
45. Usp44 ENSMUSG00000020020 12 1 - - - - - 1.000 ubiquitin specific peptidase 44 [Source:MGI Symbol;Acc:MGI:3045318]
46. Cyp7a1 ENSMUSG00000028240 2 1 - - - - - 1.000 cytochrome P450, family 7, subfamily a, polypeptide 1 [Source:MGI Symbol;Acc:MGI:106091]
47. Gm7722 ENSMUSG00000082204 2 1 - 1.000 - - - - predicted gene 7722 [Source:MGI Symbol;Acc:MGI:3644420]
48. Gm26703 ENSMUSG00000097877 2 1 - - - - - 1.000 predicted gene, 26703 [Source:MGI Symbol;Acc:MGI:5477197]
49. 4930554H23Rik ENSMUSG00000097682 2 1 - 1.000 - - - - RIKEN cDNA 4930554H23 gene [Source:MGI Symbol;Acc:MGI:1924881]
50. Gm3896 ENSMUSG00000093721 1 1 - - - - - 1.000 predicted gene 3896 [Source:MGI Symbol;Acc:MGI:3782069]
51. 5031414D18Rik 3 1 - 1.000 - - - - RIKEN cDNA 5031414D18 gene, transcript variant X2
52. Gm16302 ENSMUSG00000090023 8 1 - 1.000 - - - - predicted gene 16302 [Source:MGI Symbol;Acc:MGI:3826572]
53. D030062O11Rik ENSMUSG00000103710 1 1 - - - - 1.000 - RIKEN cDNA D030062O11 gene [Source:MGI Symbol;Acc:MGI:3641918]
54. C4bp ENSMUSG00000026405 1 1 - - - - 1.000 - complement component 4 binding protein [Source:MGI Symbol;Acc:MGI:88229]
55. Gm23799 ENSMUSG00000093300 1 1 - - - - 1.000 - predicted gene, 23799 [Source:MGI Symbol;Acc:MGI:5453576]
56. Gm26687 Gm26687 2 1 - - - - 1.000 -
57. Htr3a ENSMUSG00000032269 11 1 - 1.000 - - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:MGI Symbol;Acc:MGI:96282]
58. Rsph4a ENSMUSG00000039552 3 1 - 1.000 - - - - radial spoke head 4 homolog A (Chlamydomonas) [Source:MGI Symbol;Acc:MGI:3027894]
59. Gm16555 ENSMUSG00000090012 1 1 - - - - - 1.000 predicted gene 16555 [Source:MGI Symbol;Acc:MGI:4414975]
60. Gm12254 ENSMUSG00000085342 13 1 - - - - - 1.000 predicted gene 12254 [Source:MGI Symbol;Acc:MGI:3650324]
61. Gm8378 ENSMUSG00000090722 1 1 - - - - - 1.000 predicted gene 8378 [Source:MGI Symbol;Acc:MGI:3646777]
62. Sh2d1b2 ENSMUSG00000073494 1 1 - 1.000 - - - - SH2 domain containing 1B2 [Source:MGI Symbol;Acc:MGI:3622649]
63. Txk ENSMUSG00000054892 2 1 - - - - 1.000 - TXK tyrosine kinase [Source:MGI Symbol;Acc:MGI:102960]
64. Hgfac ENSMUSG00000029102 11 1 - - - - - 1.000 hepatocyte growth factor activator [Source:MGI Symbol;Acc:MGI:1859281]
65. Gm12463 ENSMUSG00000080916 11 1 - 1.000 - - - - predicted gene 12463 [Source:MGI Symbol;Acc:MGI:3650648]
66. Gm19345 ENSMUSG00000092216 1 1 - - - - - 1.000 predicted gene, 19345 [Source:MGI Symbol;Acc:MGI:5011530]
67. Gm16316 ENSMUSG00000087129 5 1 - 1.000 - - - - predicted gene 16316 [Source:MGI Symbol;Acc:MGI:3826530]
68. Bcas1 ENSMUSG00000013523 21 1 - - - - 1.000 - breast carcinoma amplified sequence 1 [Source:MGI Symbol;Acc:MGI:1924210]
69. Tmem125 ENSMUSG00000050854 2 1 - - - - 1.000 - transmembrane protein 125 [Source:MGI Symbol;Acc:MGI:1923409]
70. Gm13712 ENSMUSG00000082534 14 1 - 1.000 - - - - predicted gene 13712 [Source:MGI Symbol;Acc:MGI:3650489]
71. Slc5a9 ENSMUSG00000028544 11 1 - - - - 1.000 - solute carrier family 5 (sodium/glucose cotransporter), member 9 [Source:MGI Symbol;Acc:MGI:2140201]
72. Gm9703 ENSMUSG00000082741 6 1 - - - - - 1.000 predicted gene 9703 [Source:MGI Symbol;Acc:MGI:3780110]
73. Gm7942 ENSMUSG00000092166 1 1 - - - - 1.000 - predicted gene 7942 [Source:MGI Symbol;Acc:MGI:3646599]
74. B020004C17Rik ENSMUSG00000096144 2 1 - - - - 1.000 - RIKEN cDNA B020004C17 gene [Source:MGI Symbol;Acc:MGI:3588236]
75. Gm16099 ENSMUSG00000087114 5 1 - - - - 1.000 - predicted gene 16099 [Source:MGI Symbol;Acc:MGI:3802061]
76. Gm9938 ENSMUSG00000054178 12 1 - 1.000 - - - - predicted gene 9938 [Source:MGI Symbol;Acc:MGI:3641836]
77. Tshr ENSMUSG00000020963 13 1 - - - - 1.000 - thyroid stimulating hormone receptor [Source:MGI Symbol;Acc:MGI:98849]
78. Csrp3 ENSMUSG00000030470 8 1 - - - - - 1.000 cysteine and glycine-rich protein 3 [Source:MGI Symbol;Acc:MGI:1330824]
79. Iqcd ENSMUSG00000029601 20 1 - - - - 1.000 - IQ motif containing D [Source:MGI Symbol;Acc:MGI:1922982]
80. Camsap3 ENSMUSG00000044433 4 1 - - - - - 1.000 calmodulin regulated spectrin-associated protein family, member 3 [Source:MGI Symbol;Acc:MGI:1916947]
81. Vmn2r74 ENSMUSG00000090774 1 1 - - - - 1.000 - vomeronasal 2, receptor 74 [Source:MGI Symbol;Acc:MGI:3643877]
82. 1700001J03Rik ENSMUSG00000095040 3 1 - - - - - 1.000 RIKEN cDNA 1700001J03 gene [Source:MGI Symbol;Acc:MGI:1916532]
83. Gpr26 ENSMUSG00000040125 3 1 - - - - - 1.000 G protein-coupled receptor 26 [Source:MGI Symbol;Acc:MGI:2441758]
84. Gm22673 ENSMUSG00000077603 1 1 - 1.000 - - - - predicted gene, 22673 [Source:MGI Symbol;Acc:MGI:5452450]
85. Zfp474 ENSMUSG00000046886 1 1 - 1.000 - - - - zinc finger protein 474 [Source:MGI Symbol;Acc:MGI:1914008]
86. Gm12183 ENSMUSG00000082454 8 1 - - - - - 1.000 predicted gene 12183 [Source:MGI Symbol;Acc:MGI:3652175]
87. Slc2a7 ENSMUSG00000062064 2 1 - - - - - 1.000 solute carrier family 2 (facilitated glucose transporter), member 7 [Source:MGI Symbol;Acc:MGI:3650865]
88. Nsa2-ps2 ENSMUSG00000083470 2 1 - 1.000 - - - - NSA2 ribosome biogenesis homolog, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3644985]
89. Gm9242 ENSMUSG00000096156 10 1 - - - - - 1.000 predicted pseudogene 9242 [Source:MGI Symbol;Acc:MGI:3645172]
90. Gm10048 ENSMUSG00000103544 1 1 - - - - 1.000 - predicted gene 10048 [Source:MGI Symbol;Acc:MGI:3644560]
91. 9130019P16Rik ENSMUSG00000073067 3 1 - 1.000 - - - - RIKEN cDNA 9130019P16 gene [Source:MGI Symbol;Acc:MGI:1918824]
92. Gm9457 ENSMUSG00000095600 1 1 - - - - 1.000 - predicted gene 9457 [Source:MGI Symbol;Acc:MGI:3779867]
93. Gm20507 ENSMUSG00000092412 1 1 - - - - 1.000 - predicted gene 20507 [Source:MGI Symbol;Acc:MGI:5141972]
94. Paqr6 ENSMUSG00000041423 9 0.968 - 0.968 - - - - progestin and adipoQ receptor family member VI [Source:MGI Symbol;Acc:MGI:1916207]
95. Pld6 ENSMUSG00000043648 38 0.964 - - - - 0.964 - phospholipase D family, member 6 [Source:MGI Symbol;Acc:MGI:2687283]
96. Fgl2 ENSMUSG00000039899 55 0.94 - 0.940 - - - - fibrinogen-like protein 2 [Source:MGI Symbol;Acc:MGI:103266]
97. Zfp873 ENSMUSG00000061371 34 0.932 - - - - - 0.932 zinc finger protein 873 [Source:MGI Symbol;Acc:MGI:3040689]
98. Slc9a7 ENSMUSG00000037341 5 0.923 - - - - 0.923 - solute carrier family 9 (sodium/hydrogen exchanger), member 7 [Source:MGI Symbol;Acc:MGI:2444530]
99. 4933407L21Rik ENSMUSG00000026224 3 0.922 - 0.922 - - - - RIKEN cDNA 4933407L21 gene [Source:MGI Symbol;Acc:MGI:1918391]
100. Gm26573 ENSMUSG00000096958, ENSMUSG00000116495 21 0.891 - 0.891 - - - - predicted gene, 26573 [Source:MGI Symbol;Acc:MGI:5477067]

There are 155 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA