Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Gm4540

Gene Name Gene ID Reads Annotation
Gm4540 ENSMUSG00000092072 449 predicted gene 4540 [Source:MGI Symbol;Acc:MGI:3782724]







Genes with expression patterns similar to Gm4540

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Gm4540 ENSMUSG00000092072 449 6 1.000 1.000 1.000 1.000 1.000 1.000 predicted gene 4540 [Source:MGI Symbol;Acc:MGI:3782724]
2. Mt1 ENSMUSG00000031765 1970 0.918 - 0.918 - - - - metallothionein 1 [Source:MGI Symbol;Acc:MGI:97171]
3. Cenpp ENSMUSG00000021391 710 0.9 - 0.900 - - - - centromere protein P [Source:MGI Symbol;Acc:MGI:1913586]
4. Smad6 ENSMUSG00000036867 1254 0.892 - 0.892 - - - - SMAD family member 6 [Source:MGI Symbol;Acc:MGI:1336883]
5. Lcorl ENSMUSG00000015882 1455 0.889 - 0.889 - - - - ligand dependent nuclear receptor corepressor-like [Source:MGI Symbol;Acc:MGI:2651932]
6. Pet100 ENSMUSG00000087687 1379 0.884 - 0.884 - - - - PET100 homolog [Source:MGI Symbol;Acc:MGI:3615306]
7. Cox14 ENSMUSG00000023020 2075 0.879 - 0.879 - - - - cytochrome c oxidase assembly protein 14 [Source:MGI Symbol;Acc:MGI:1913629]
8. Mau2 ENSMUSG00000031858 1748 0.87 - 0.870 - - - - MAU2 sister chromatid cohesion factor [Source:MGI Symbol;Acc:MGI:1921799]
9. Zfp385a ENSMUSG00000000552 2121 0.859 - 0.859 - - - - zinc finger protein 385A [Source:MGI Symbol;Acc:MGI:1352495]
10. Eftud2 ENSMUSG00000020929 2817 0.856 - 0.856 - - - - elongation factor Tu GTP binding domain containing 2 [Source:MGI Symbol;Acc:MGI:1336880]
11. Rad51 ENSMUSG00000027323 4863 0.853 - 0.853 - - - - RAD51 recombinase [Source:MGI Symbol;Acc:MGI:97890]
12. Snai2 ENSMUSG00000022676 2306 0.85 - 0.850 - - - - snail family zinc finger 2 [Source:MGI Symbol;Acc:MGI:1096393]
13. Atg12 ENSMUSG00000032905 4891 0.849 - 0.849 - - - - autophagy related 12 [Source:MGI Symbol;Acc:MGI:1914776]
14. Tma16 ENSMUSG00000025591 1359 0.839 - 0.839 - - - - translation machinery associated 16 [Source:MGI Symbol;Acc:MGI:1913532]
15. Pycr2 ENSMUSG00000026520 1719 0.837 - 0.837 - - - - pyrroline-5-carboxylate reductase family, member 2 [Source:MGI Symbol;Acc:MGI:1277956]
16. Slc25a13 ENSMUSG00000015112 2038 0.833 - 0.833 - - - - solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 [Source:MGI Symbol;Acc:MGI:1354721]
17. Sbk1 ENSMUSG00000042978 3908 0.823 - 0.823 - - - - SH3-binding kinase 1 [Source:MGI Symbol;Acc:MGI:2135937]
18. Scaf4 ENSMUSG00000022983 1117 0.82 - 0.820 - - - - SR-related CTD-associated factor 4 [Source:MGI Symbol;Acc:MGI:2146350]
19. Cops7b ENSMUSG00000026240 2018 0.819 - 0.819 - - - - COP9 signalosome subunit 7B [Source:MGI Symbol;Acc:MGI:1349388]
20. Gabra1 ENSMUSG00000010803 177 0.81 - - - - - 0.810 gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1 [Source:MGI Symbol;Acc:MGI:95613]
21. Helz ENSMUSG00000020721 3743 0.805 - 0.805 - - - - helicase with zinc finger domain [Source:MGI Symbol;Acc:MGI:1925705]
22. Nol10 ENSMUSG00000061458 1510 0.8 - 0.800 - - - - nucleolar protein 10 [Source:MGI Symbol;Acc:MGI:2684913]
23. Uqcr11 ENSMUSG00000020163 5345 0.797 - 0.797 - - - - ubiquinol-cytochrome c reductase, complex III subunit XI [Source:MGI Symbol;Acc:MGI:1913844]
24. Nek7 ENSMUSG00000026393 2327 0.794 - 0.794 - - - - NIMA (never in mitosis gene a)-related expressed kinase 7 [Source:MGI Symbol;Acc:MGI:1890645]
25. Zfp612 ENSMUSG00000044676 180 0.794 - - - - - 0.794 zinc finger protein 612 [Source:MGI Symbol;Acc:MGI:2443465]
26. Zswim6 ENSMUSG00000032846 2357 0.792 - 0.792 - - - - zinc finger SWIM-type containing 6 [Source:MGI Symbol;Acc:MGI:1914513]
27. 4833418N02Rik ENSMUSG00000085287 88 0.79 - 0.790 - - - - RIKEN cDNA 4833418N02 gene [Source:MGI Symbol;Acc:MGI:1921847]
28. Rab11a ENSMUSG00000004771 5656 0.79 - 0.790 - - - - RAB11A, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1858202]
29. 2310044G17Rik 2310044G17Rik 2536 0.787 - 0.787 - - - -
30. Myocd ENSMUSG00000020542 95 0.781 - 0.781 - - - - myocardin [Source:MGI Symbol;Acc:MGI:2137495]
31. Pola2 ENSMUSG00000024833 2097 0.781 - 0.781 - - - - polymerase (DNA directed), alpha 2 [Source:MGI Symbol;Acc:MGI:99690]
32. Gm12166 ENSMUSG00000069899 88 0.78 - 0.780 - - - - predicted gene 12166 [Source:MGI Symbol;Acc:MGI:3650635]
33. Ppapdc3 Ppapdc3 168 0.78 - 0.780 - - - -
34. Gm5560 ENSMUSG00000067161 131 0.779 - 0.779 - - - - predicted pseudogene 5560 [Source:MGI Symbol;Acc:MGI:3647980]
35. Lgals4 ENSMUSG00000053964 72 0.779 - 0.779 - - - - lectin, galactose binding, soluble 4 [Source:MGI Symbol;Acc:MGI:107536]
36. Alas2 ENSMUSG00000025270 51 0.778 - 0.778 - - - - aminolevulinic acid synthase 2, erythroid [Source:MGI Symbol;Acc:MGI:87990]
37. Ccl9 ENSMUSG00000019122 84 0.778 - 0.778 - - - - chemokine (C-C motif) ligand 9 [Source:MGI Symbol;Acc:MGI:104533]
38. Fam115c Fam115c 138 0.778 - 0.778 - - - -
39. Riiad1 ENSMUSG00000028139 70 0.778 - 0.778 - - - - regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1 [Source:MGI Symbol;Acc:MGI:1913603]
40. Gm26660 ENSMUSG00000097601 53 0.778 - 0.778 - - - - predicted gene, 26660 [Source:MGI Symbol;Acc:MGI:5477154]
41. Defb42 ENSMUSG00000054763 274 0.777 - 0.777 - - - - defensin beta 42 [Source:MGI Symbol;Acc:MGI:3033850]
42. Hspa2 ENSMUSG00000059970 134 0.777 - 0.777 - - - - heat shock protein 2 [Source:MGI Symbol;Acc:MGI:96243]
43. Syt6 ENSMUSG00000027849 95 0.776 - 0.776 - - - - synaptotagmin VI [Source:MGI Symbol;Acc:MGI:1859544]
44. Mir1983 ENSMUSG00000088148 63 0.775 - 0.775 - - - - microRNA 1983 [Source:MGI Symbol;Acc:MGI:3837223]
45. Cnr1 ENSMUSG00000044288 299 0.772 - 0.772 - - - - cannabinoid receptor 1 (brain) [Source:MGI Symbol;Acc:MGI:104615]
46. Ubxn1 ENSMUSG00000071655 5746 0.771 - 0.771 - - - - UBX domain protein 1 [Source:MGI Symbol;Acc:MGI:1289301]
47. Tmem181a ENSMUSG00000038141 197 0.771 - 0.771 - - - - transmembrane protein 181A [Source:MGI Symbol;Acc:MGI:1924356]
48. Paxbp1 ENSMUSG00000022974 322 0.77 - 0.770 - - - - PAX3 and PAX7 binding protein 1 [Source:MGI Symbol;Acc:MGI:1914617]
49. 4930579G24Rik ENSMUSG00000027811 253 0.768 - 0.768 - - - - RIKEN cDNA 4930579G24 gene [Source:MGI Symbol;Acc:MGI:1923189]
50. Ncln ENSMUSG00000020238 1290 0.768 - 0.768 - - - - nicalin [Source:MGI Symbol;Acc:MGI:1926081]
51. 4921530L18Rik 4921530L18Rik 134 0.768 - 0.768 - - - -
52. Scfd2 ENSMUSG00000062110 241 0.767 - 0.767 - - - - Sec1 family domain containing 2 [Source:MGI Symbol;Acc:MGI:2443446]
53. Gm15542 ENSMUSG00000083396 259 0.767 - 0.767 - - - - predicted gene 15542 [Source:MGI Symbol;Acc:MGI:3782990]
54. Dnajc27 ENSMUSG00000020657 686 0.767 - 0.767 - - - - DnaJ heat shock protein family (Hsp40) member C27 [Source:MGI Symbol;Acc:MGI:2443036]
55. S100a13 ENSMUSG00000042312 218 0.766 - 0.766 - - - - S100 calcium binding protein A13 [Source:MGI Symbol;Acc:MGI:109581]
56. Prkar1b ENSMUSG00000025855 360 0.766 - 0.766 - - - - protein kinase, cAMP dependent regulatory, type I beta [Source:MGI Symbol;Acc:MGI:97759]
57. Slc7a14 ENSMUSG00000069072 717 0.765 - 0.765 - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 14 [Source:MGI Symbol;Acc:MGI:3040688]
58. Airn ENSMUSG00000078247 868 0.765 - 0.765 - - - - antisense Igf2r RNA [Source:MGI Symbol;Acc:MGI:1353471]
59. Wscd1 ENSMUSG00000020811 318 0.764 - 0.764 - - - - WSC domain containing 1 [Source:MGI Symbol;Acc:MGI:2448493]
60. Dnajc1 ENSMUSG00000026740 1120 0.764 - 0.764 - - - - DnaJ heat shock protein family (Hsp40) member C1 [Source:MGI Symbol;Acc:MGI:103268]
61. Robo2 ENSMUSG00000052516 1177 0.764 - 0.764 - - - - roundabout guidance receptor 2 [Source:MGI Symbol;Acc:MGI:1890110]
62. Grin3a ENSMUSG00000039579 433 0.763 - 0.763 - - - - glutamate receptor ionotropic, NMDA3A [Source:MGI Symbol;Acc:MGI:1933206]
63. Synpo2 ENSMUSG00000050315 250 0.761 - 0.761 - - - - synaptopodin 2 [Source:MGI Symbol;Acc:MGI:2153070]
64. Arid2 ENSMUSG00000033237 5679 0.761 - 0.761 - - - - AT rich interactive domain 2 (ARID, RFX-like) [Source:MGI Symbol;Acc:MGI:1924294]
65. Cobl ENSMUSG00000020173 269 0.761 - 0.761 - - - - cordon-bleu WH2 repeat [Source:MGI Symbol;Acc:MGI:105056]
66. Ccne2 ENSMUSG00000028212 419 0.761 - 0.761 - - - - cyclin E2 [Source:MGI Symbol;Acc:MGI:1329034]
67. Tecpr1 ENSMUSG00000066621 1296 0.76 - 0.760 - - - - tectonin beta-propeller repeat containing 1 [Source:MGI Symbol;Acc:MGI:1917631]
68. Hecw2 ENSMUSG00000042807 346 0.759 - 0.759 - - - - HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 [Source:MGI Symbol;Acc:MGI:2685817]
69. Stom ENSMUSG00000026880 646 0.759 - 0.759 - - - - stomatin [Source:MGI Symbol;Acc:MGI:95403]
70. Gm26981 ENSMUSG00000098041 717 0.758 - - - - - 0.758 predicted gene, 26981 [Source:MGI Symbol;Acc:MGI:5504096]
71. Gm21781 ENSMUSG00000095123 261 0.758 - 0.758 - - - - predicted gene, 21781 [Source:MGI Symbol;Acc:MGI:5433945]
72. Cd99l2 ENSMUSG00000035776 1089 0.757 - 0.757 - - - - CD99 antigen-like 2 [Source:MGI Symbol;Acc:MGI:2177151]
73. Pex10 ENSMUSG00000029047 243 0.757 - 0.757 - - - - peroxisomal biogenesis factor 10 [Source:MGI Symbol;Acc:MGI:2684988]
74. Mertk ENSMUSG00000014361 329 0.756 - 0.756 - - - - c-mer proto-oncogene tyrosine kinase [Source:MGI Symbol;Acc:MGI:96965]
75. Cdpf1 ENSMUSG00000064284 245 0.756 - 0.756 - - - - cysteine rich, DPF motif domain containing 1 [Source:MGI Symbol;Acc:MGI:1919605]
76. C920011F04Rik C920011F04Rik 362 0.756 - 0.756 - - - -
77. Espl1 ENSMUSG00000058290 1337 0.756 - 0.756 - - - - extra spindle pole bodies 1, separase [Source:MGI Symbol;Acc:MGI:2146156]
78. Gm15457 ENSMUSG00000087374 23 0.755 - - - - - 0.755 predicted gene 15457 [Source:MGI Symbol;Acc:MGI:3705190]
79. Tnc ENSMUSG00000028364 2155 0.755 - 0.755 - - - - tenascin C [Source:MGI Symbol;Acc:MGI:101922]
80. 8430419L09Rik 8430419L09Rik 409 0.755 - 0.755 - - - -
81. Dennd6b ENSMUSG00000015377 391 0.754 - 0.754 - - - - DENN/MADD domain containing 6B [Source:MGI Symbol;Acc:MGI:1916690]
82. Ccdc106 ENSMUSG00000035228 331 0.754 - - - - - 0.754 coiled-coil domain containing 106 [Source:MGI Symbol;Acc:MGI:2385900]
83. Lrch1 ENSMUSG00000068015 520 0.754 - 0.754 - - - - leucine-rich repeats and calponin homology (CH) domain containing 1 [Source:MGI Symbol;Acc:MGI:2443390]
84. Prr12 ENSMUSG00000046574 4381 0.753 - 0.753 - - - - proline rich 12 [Source:MGI Symbol;Acc:MGI:2679002]
85. Rpl22-ps1 ENSMUSG00000080877 368 0.753 - 0.753 - - - - ribosomal protein L22, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3644276]
86. 1700109H08Rik ENSMUSG00000008307 17 0.752 - - - - - 0.752 RIKEN cDNA 1700109H08 gene [Source:MGI Symbol;Acc:MGI:1924286]
87. Hif3a ENSMUSG00000004328 436 0.752 - 0.752 - - - - hypoxia inducible factor 3, alpha subunit [Source:MGI Symbol;Acc:MGI:1859778]
88. Prkag2 ENSMUSG00000028944 521 0.752 - 0.752 - - - - protein kinase, AMP-activated, gamma 2 non-catalytic subunit [Source:MGI Symbol;Acc:MGI:1336153]
89. 4833439L19Rik ENSMUSG00000025871 2882 0.751 - 0.751 - - - - RIKEN cDNA 4833439L19 gene [Source:MGI Symbol;Acc:MGI:1921162]
90. Gm10822 ENSMUSG00000097377 9 0.751 - - - - - 0.751 predicted gene 10822 [Source:MGI Symbol;Acc:MGI:3641955]
91. Crb3 ENSMUSG00000044279 54 0.751 - - - - - 0.751 crumbs family member 3 [Source:MGI Symbol;Acc:MGI:2670904]
92. Gm13648 ENSMUSG00000086549 21 0.751 - - - - - 0.751 predicted gene 13648 [Source:MGI Symbol;Acc:MGI:3652033]
93. Gm12368 ENSMUSG00000083934 7 0.751 - - - - - 0.751 predicted gene 12368 [Source:MGI Symbol;Acc:MGI:3649555]
94. Ptplad2 Ptplad2 382 0.75 - 0.750 - - - -
95. Leprel1 Leprel1 49 0.75 - - - - - 0.750
96. Gm10722 ENSMUSG00000091028 539 0.749 - 0.749 - - - - predicted gene 10722 [Source:MGI Symbol;Acc:MGI:3642024]
97. Fanci ENSMUSG00000039187 478 0.748 - 0.748 - - - - Fanconi anemia, complementation group I [Source:MGI Symbol;Acc:MGI:2384790]
98. 2410016O06Rik 799 0.748 - 0.748 - - - - RIKEN cDNA 2410016O06 gene
99. Ccdc120 ENSMUSG00000031150 486 0.747 - 0.747 - - - - coiled-coil domain containing 120 [Source:MGI Symbol;Acc:MGI:1859619]
100. Arl16 ENSMUSG00000057594 663 0.747 - 0.747 - - - - ADP-ribosylation factor-like 16 [Source:MGI Symbol;Acc:MGI:1917567]

There are 99 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA