Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Ddx39

Gene Name Gene ID Reads Annotation
Ddx39 ENSMUSG00000005481 3895 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Source:MGI Symbol;Acc:MGI:1915528]







Genes with expression patterns similar to Ddx39

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ddx39 ENSMUSG00000005481 3895 6 1.000 1.000 1.000 1.000 1.000 1.000 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Source:MGI Symbol;Acc:MGI:1915528]
2. Gm10169 ENSMUSG00000083669 1498 0.843 - 0.843 - - - - predicted pseudogene 10169 [Source:MGI Symbol;Acc:MGI:3642393]
3. Akr1b8 ENSMUSG00000029762 930 0.83 - 0.830 - - - - aldo-keto reductase family 1, member B8 [Source:MGI Symbol;Acc:MGI:107673]
4. Fads1 ENSMUSG00000010663 7507 0.826 - 0.826 - - - - fatty acid desaturase 1 [Source:MGI Symbol;Acc:MGI:1923517]
5. Gm10086 ENSMUSG00000060730 2124 0.804 - 0.804 - - - - predicted pseudogene 10086 [Source:MGI Symbol;Acc:MGI:3642342]
6. Mfap3 ENSMUSG00000020522 5793 0.792 - 0.792 - - - - microfibrillar-associated protein 3 [Source:MGI Symbol;Acc:MGI:1924068]
7. Ccdc25 ENSMUSG00000022035 1757 0.791 - 0.791 - - - - coiled-coil domain containing 25 [Source:MGI Symbol;Acc:MGI:1914429]
8. Ska3 ENSMUSG00000021965 1467 0.789 - 0.789 - - - - spindle and kinetochore associated complex subunit 3 [Source:MGI Symbol;Acc:MGI:3041235]
9. Ppil1 ENSMUSG00000024007 2662 0.788 - 0.788 - - - - peptidylprolyl isomerase (cyclophilin)-like 1 [Source:MGI Symbol;Acc:MGI:1916066]
10. Dynlt1c ENSMUSG00000000579 571 0.78 - 0.780 - - - - dynein light chain Tctex-type 1C [Source:MGI Symbol;Acc:MGI:3807476]
11. Myl9 ENSMUSG00000067818 2365 0.779 - 0.779 - - - - myosin, light polypeptide 9, regulatory [Source:MGI Symbol;Acc:MGI:2138915]
12. Ptcd2 ENSMUSG00000021650 1967 0.778 - 0.778 - - - - pentatricopeptide repeat domain 2 [Source:MGI Symbol;Acc:MGI:1916177]
13. Rbm45 ENSMUSG00000042369 852 0.778 - 0.778 - - - - RNA binding motif protein 45 [Source:MGI Symbol;Acc:MGI:2387367]
14. Gbf1 ENSMUSG00000025224 1995 0.776 - 0.776 - - - - golgi-specific brefeldin A-resistance factor 1 [Source:MGI Symbol;Acc:MGI:1861607]
15. Dzip3 ENSMUSG00000064061 2677 0.776 - 0.776 - - - - DAZ interacting protein 3, zinc finger [Source:MGI Symbol;Acc:MGI:1917433]
16. Dhx8 ENSMUSG00000034931 955 0.775 - 0.775 - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 8 [Source:MGI Symbol;Acc:MGI:1306823]
17. Taf1d ENSMUSG00000031939 2288 0.774 - 0.774 - - - - TATA-box binding protein associated factor, RNA polymerase I, D [Source:MGI Symbol;Acc:MGI:1922566]
18. Gm13075 ENSMUSG00000086061 1783 0.774 - 0.774 - - - - predicted gene 13075 [Source:MGI Symbol;Acc:MGI:3651958]
19. Snrpg ENSMUSG00000057278 5065 0.774 - 0.774 - - - - small nuclear ribonucleoprotein polypeptide G [Source:MGI Symbol;Acc:MGI:1915261]
20. Cdc6 ENSMUSG00000017499 1721 0.774 - 0.774 - - - - cell division cycle 6 [Source:MGI Symbol;Acc:MGI:1345150]
21. Tubgcp3 ENSMUSG00000000759 1959 0.773 - 0.773 - - - - tubulin, gamma complex associated protein 3 [Source:MGI Symbol;Acc:MGI:2183752]
22. Rnaseh2a ENSMUSG00000052926 1911 0.772 - 0.772 - - - - ribonuclease H2, large subunit [Source:MGI Symbol;Acc:MGI:1916974]
23. Tars2 ENSMUSG00000028107 1083 0.77 - 0.770 - - - - threonyl-tRNA synthetase 2, mitochondrial (putative) [Source:MGI Symbol;Acc:MGI:1919057]
24. Satb1 ENSMUSG00000023927 1731 0.77 - 0.770 - - - - special AT-rich sequence binding protein 1 [Source:MGI Symbol;Acc:MGI:105084]
25. Hoxa5 ENSMUSG00000038253 14510 0.77 - - 0.770 - - - homeobox A5 [Source:MGI Symbol;Acc:MGI:96177]
26. Tmem248 ENSMUSG00000053094 2906 0.769 - 0.769 - - - - transmembrane protein 248 [Source:MGI Symbol;Acc:MGI:1918917]
27. Ate1 ENSMUSG00000030850 1007 0.769 - 0.769 - - - - arginyltransferase 1 [Source:MGI Symbol;Acc:MGI:1333870]
28. Tmem209 ENSMUSG00000029782 1738 0.767 - 0.767 - - - - transmembrane protein 209 [Source:MGI Symbol;Acc:MGI:1919899]
29. 2700089E24Rik 2700089E24Rik 2392 0.767 - 0.767 - - - -
30. Ndufa8 ENSMUSG00000026895 8108 0.759 - 0.759 - - - - NADH:ubiquinone oxidoreductase subunit A8 [Source:MGI Symbol;Acc:MGI:1915625]
31. Fam84b ENSMUSG00000072568 1349 0.759 - 0.759 - - - - family with sequence similarity 84, member B [Source:MGI Symbol;Acc:MGI:3026924]
32. Tma7 ENSMUSG00000091537 17398 0.759 - 0.759 - - - - translational machinery associated 7 [Source:MGI Symbol;Acc:MGI:1913417]
33. Gnl3l ENSMUSG00000025266 2782 0.756 - 0.756 - - - - guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:MGI Symbol;Acc:MGI:2448557]
34. Fam21 2061 0.754 - 0.754 - - - - family with sequence similarity 21, transcript variant X1
35. Mybbp1a ENSMUSG00000040463 3297 0.753 - 0.753 - - - - MYB binding protein (P160) 1a [Source:MGI Symbol;Acc:MGI:106181]
36. Tmem132c ENSMUSG00000034324 2608 0.751 - - - - 0.751 - transmembrane protein 132C [Source:MGI Symbol;Acc:MGI:2443061]
37. 4930453N24Rik ENSMUSG00000059920 2738 0.75 - 0.750 - - - - RIKEN cDNA 4930453N24 gene [Source:MGI Symbol;Acc:MGI:1914859]
38. Nemf ENSMUSG00000020982 2930 0.749 - 0.749 - - - - nuclear export mediator factor [Source:MGI Symbol;Acc:MGI:1918305]
39. Cdip1 ENSMUSG00000004071 2198 0.748 - 0.748 - - - - cell death inducing Trp53 target 1 [Source:MGI Symbol;Acc:MGI:1913876]
40. Slc25a4 ENSMUSG00000031633 13699 0.746 0.746 - - - - - solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4 [Source:MGI Symbol;Acc:MGI:1353495]
41. Cbx6 ENSMUSG00000089715 2755 0.744 - 0.744 - - - - chromobox 6 [Source:MGI Symbol;Acc:MGI:3512628]
42. D030056L22Rik ENSMUSG00000047044 6621 0.742 - 0.742 - - - - RIKEN cDNA D030056L22 gene [Source:MGI Symbol;Acc:MGI:3583960]
43. Lysmd4 ENSMUSG00000043831 336 0.741 - - - - 0.741 - LysM, putative peptidoglycan-binding, domain containing 4 [Source:MGI Symbol;Acc:MGI:1922349]
44. Atp5b ENSMUSG00000025393 23347 0.741 - - 0.741 - - - ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit [Source:MGI Symbol;Acc:MGI:107801]
45. Magt1 ENSMUSG00000031232 5858 0.74 - 0.740 - - - - magnesium transporter 1 [Source:MGI Symbol;Acc:MGI:1914325]
46. Hmga1 ENSMUSG00000046711 2878 0.74 - - - - 0.740 - high mobility group AT-hook 1 [Source:MGI Symbol;Acc:MGI:96160]
47. Notch1 ENSMUSG00000026923 540 0.739 - - - - 0.739 - notch 1 [Source:MGI Symbol;Acc:MGI:97363]
48. Gm13793 ENSMUSG00000087069 2307 0.737 - 0.737 - - - - predicted gene 13793 [Source:MGI Symbol;Acc:MGI:3652243]
49. Pgrmc1 ENSMUSG00000006373 8718 0.737 - 0.737 - - - - progesterone receptor membrane component 1 [Source:MGI Symbol;Acc:MGI:1858305]
50. Fbxo25 ENSMUSG00000038365 940 0.734 - - - - 0.734 - F-box protein 25 [Source:MGI Symbol;Acc:MGI:1914072]
51. Serpinb6a ENSMUSG00000060147 2361 0.733 - 0.733 - - - - serine (or cysteine) peptidase inhibitor, clade B, member 6a [Source:MGI Symbol;Acc:MGI:103123]
52. Faf2 ENSMUSG00000025873 1737 0.733 - - - - 0.733 - Fas associated factor family member 2 [Source:MGI Symbol;Acc:MGI:1923827]
53. Rab33b ENSMUSG00000027739 702 0.732 - - - - 0.732 - RAB33B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:1330805]
54. Gm13342 ENSMUSG00000082516 112 0.732 - 0.732 - - - - predicted gene 13342 [Source:MGI Symbol;Acc:MGI:3650441]
55. Tgfbr3 ENSMUSG00000029287 1818 0.732 - 0.732 - - - - transforming growth factor, beta receptor III [Source:MGI Symbol;Acc:MGI:104637]
56. Zfp937 ENSMUSG00000060336 300 0.73 - 0.730 - - - - zinc finger protein 937 [Source:MGI Symbol;Acc:MGI:3644476]
57. Tfip11 ENSMUSG00000029345 399 0.73 - 0.730 - - - - tuftelin interacting protein 11 [Source:MGI Symbol;Acc:MGI:1930075]
58. Cradd ENSMUSG00000045867 347 0.73 - 0.730 - - - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:MGI Symbol;Acc:MGI:1336168]
59. Rpl35a ENSMUSG00000060636 411 0.73 - 0.730 - - - - ribosomal protein L35A [Source:MGI Symbol;Acc:MGI:1928894]
60. Haus1 ENSMUSG00000041840, ENSMUSG00000115884 877 0.73 - 0.730 - - - - HAUS augmin-like complex, subunit 1 [Source:MGI Symbol;Acc:MGI:2385076]
61. Gemin2 ENSMUSG00000060121 858 0.73 - 0.730 - - - - gem nuclear organelle associated protein 2 [Source:MGI Symbol;Acc:MGI:1913853]
62. Nxt2 ENSMUSG00000042271 400 0.729 - 0.729 - - - - nuclear transport factor 2-like export factor 2 [Source:MGI Symbol;Acc:MGI:2147914]
63. Map4k2 ENSMUSG00000024948, ENSMUSG00000106850 1019 0.728 - 0.728 - - - - mitogen-activated protein kinase kinase kinase kinase 2 [Source:MGI Symbol;Acc:MGI:1346883]
64. 1700093K21Rik ENSMUSG00000020286 497 0.728 - 0.728 - - - - RIKEN cDNA 1700093K21 gene [Source:MGI Symbol;Acc:MGI:1914608]
65. Rad9b ENSMUSG00000038569 151 0.728 - 0.728 - - - - RAD9 checkpoint clamp component B [Source:MGI Symbol;Acc:MGI:2385231]
66. Thbs1 ENSMUSG00000040152 1713 0.728 - 0.728 - - - - thrombospondin 1 [Source:MGI Symbol;Acc:MGI:98737]
67. Rgs18 ENSMUSG00000026357 156 0.728 - 0.728 - - - - regulator of G-protein signaling 18 [Source:MGI Symbol;Acc:MGI:1927498]
68. H2-Q4 ENSMUSG00000035929 157 0.728 - 0.728 - - - - histocompatibility 2, Q region locus 4 [Source:MGI Symbol;Acc:MGI:95933]
69. Zfand5 ENSMUSG00000024750 6972 0.728 - 0.728 - - - - zinc finger, AN1-type domain 5 [Source:MGI Symbol;Acc:MGI:1278334]
70. Coch ENSMUSG00000020953 154 0.728 - 0.728 - - - - cochlin [Source:MGI Symbol;Acc:MGI:1278313]
71. Gm26764 ENSMUSG00000097667 599 0.728 - 0.728 - - - - predicted gene, 26764 [Source:MGI Symbol;Acc:MGI:5477258]
72. Fignl2 ENSMUSG00000095440 4541 0.728 - 0.728 - - - - fidgetin-like 2 [Source:MGI Symbol;Acc:MGI:3646919]
73. Sirt3 ENSMUSG00000025486 327 0.728 - 0.728 - - - - sirtuin 3 [Source:MGI Symbol;Acc:MGI:1927665]
74. Mccc1 ENSMUSG00000027709 688 0.728 - 0.728 - - - - methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) [Source:MGI Symbol;Acc:MGI:1919289]
75. Zfp456 ENSMUSG00000078995 125 0.728 - 0.728 - - - - zinc finger protein 456 [Source:MGI Symbol;Acc:MGI:3040694]
76. Tmem40 ENSMUSG00000059900 110 0.728 - 0.728 - - - - transmembrane protein 40 [Source:MGI Symbol;Acc:MGI:2137870]
77. Cnot8 ENSMUSG00000020515 2299 0.727 - 0.727 - - - - CCR4-NOT transcription complex, subunit 8 [Source:MGI Symbol;Acc:MGI:1916375]
78. Gchfr ENSMUSG00000046814 266 0.727 - 0.727 - - - - GTP cyclohydrolase I feedback regulator [Source:MGI Symbol;Acc:MGI:2443977]
79. Mre11a ENSMUSG00000031928 1266 0.727 - 0.727 - - - - MRE11A homolog A, double strand break repair nuclease [Source:MGI Symbol;Acc:MGI:1100512]
80. Eif1ax ENSMUSG00000067194 8637 0.727 0.727 - - - - - eukaryotic translation initiation factor 1A, X-linked [Source:MGI Symbol;Acc:MGI:1913485]
81. 3830406C13Rik ENSMUSG00000033111 586 0.727 - 0.727 - - - - RIKEN cDNA 3830406C13 gene [Source:MGI Symbol;Acc:MGI:1917937]
82. Ranbp6 ENSMUSG00000074909 552 0.726 - 0.726 - - - - RAN binding protein 6 [Source:MGI Symbol;Acc:MGI:2683212]
83. Trim12a ENSMUSG00000066258 403 0.726 - 0.726 - - - - tripartite motif-containing 12A [Source:MGI Symbol;Acc:MGI:1923931]
84. Mob1b ENSMUSG00000006262 1061 0.726 - 0.726 - - - - MOB kinase activator 1B [Source:MGI Symbol;Acc:MGI:1915723]
85. Scpep1 ENSMUSG00000000278 1675 0.726 - 0.726 - - - - serine carboxypeptidase 1 [Source:MGI Symbol;Acc:MGI:1921867]
86. Efnb1 ENSMUSG00000031217 2777 0.726 - 0.726 - - - - ephrin B1 [Source:MGI Symbol;Acc:MGI:102708]
87. Acsf3 ENSMUSG00000015016 692 0.726 - 0.726 - - - - acyl-CoA synthetase family member 3 [Source:MGI Symbol;Acc:MGI:2182591]
88. Gm26809 ENSMUSG00000097815 449 0.726 - 0.726 - - - - predicted gene, 26809 [Source:MGI Symbol;Acc:MGI:5477303]
89. Cdc42ep5 ENSMUSG00000063838 592 0.726 - 0.726 - - - - CDC42 effector protein (Rho GTPase binding) 5 [Source:MGI Symbol;Acc:MGI:1929745]
90. Cyp2j6 ENSMUSG00000052914 325 0.725 - 0.725 - - - - cytochrome P450, family 2, subfamily j, polypeptide 6 [Source:MGI Symbol;Acc:MGI:1270148]
91. Rnf31 ENSMUSG00000047098 530 0.725 - 0.725 - - - - ring finger protein 31 [Source:MGI Symbol;Acc:MGI:1934704]
92. Gnb1l ENSMUSG00000000884 358 0.725 - 0.725 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 1-like [Source:MGI Symbol;Acc:MGI:1338057]
93. Trp53inp1 ENSMUSG00000028211 686 0.725 - 0.725 - - - - transformation related protein 53 inducible nuclear protein 1 [Source:MGI Symbol;Acc:MGI:1926609]
94. Six1 ENSMUSG00000051367 745 0.724 - 0.724 - - - - sine oculis-related homeobox 1 [Source:MGI Symbol;Acc:MGI:102780]
95. Hps3 ENSMUSG00000027615 596 0.724 - 0.724 - - - - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:MGI Symbol;Acc:MGI:2153839]
96. Hibch ENSMUSG00000041426 755 0.724 - 0.724 - - - - 3-hydroxyisobutyryl-Coenzyme A hydrolase [Source:MGI Symbol;Acc:MGI:1923792]
97. Gpc4 ENSMUSG00000031119 424 0.724 - 0.724 - - - - glypican 4 [Source:MGI Symbol;Acc:MGI:104902]
98. Dnm2 ENSMUSG00000033335 1247 0.724 - 0.724 - - - - dynamin 2 [Source:MGI Symbol;Acc:MGI:109547]
99. Vav3 ENSMUSG00000033721 527 0.724 - 0.724 - - - - vav 3 oncogene [Source:MGI Symbol;Acc:MGI:1888518]
100. Sema4g ENSMUSG00000025207 494 0.723 - 0.723 - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G [Source:MGI Symbol;Acc:MGI:1347047]

There are 75 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA