Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Csmd1

Gene Name Gene ID Reads Annotation
Csmd1 ENSMUSG00000060924 7 CUB and Sushi multiple domains 1 [Source:MGI Symbol;Acc:MGI:2137383]







Genes with expression patterns similar to Csmd1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Csmd1 ENSMUSG00000060924 7 3 1.000 - 1.000 - 1.000 - CUB and Sushi multiple domains 1 [Source:MGI Symbol;Acc:MGI:2137383]
2. Fgf3 ENSMUSG00000031074 13 1.625 0.807 - 0.818 - - - fibroblast growth factor 3 [Source:MGI Symbol;Acc:MGI:95517]
3. Gm15842 ENSMUSG00000083909 1 1 - - 1.000 - - - predicted gene 15842 [Source:MGI Symbol;Acc:MGI:3801843]
4. Scp2d1 ENSMUSG00000027431 3 1 - - 1.000 - - - SCP2 sterol-binding domain containing 1 [Source:MGI Symbol;Acc:MGI:1913578]
5. Gm26129 ENSMUSG00000064653 10 1 - - 1.000 - - - predicted gene, 26129 [Source:MGI Symbol;Acc:MGI:5455906]
6. Klhl30 ENSMUSG00000026308 8 1 - - 1.000 - - - kelch-like 30 [Source:MGI Symbol;Acc:MGI:1918038]
7. 1700001J03Rik ENSMUSG00000095040 3 1 - - 1.000 - - - RIKEN cDNA 1700001J03 gene [Source:MGI Symbol;Acc:MGI:1916532]
8. Nipal4 ENSMUSG00000020411 1 1 - - 1.000 - - - NIPA-like domain containing 4 [Source:MGI Symbol;Acc:MGI:2444671]
9. Kcng4 ENSMUSG00000045246 3 1 - - 1.000 - - - potassium voltage-gated channel, subfamily G, member 4 [Source:MGI Symbol;Acc:MGI:1913983]
10. Klrb1c ENSMUSG00000030325 1 1 - - 1.000 - - - killer cell lectin-like receptor subfamily B member 1C [Source:MGI Symbol;Acc:MGI:107538]
11. Amelx ENSMUSG00000031354 0 1 - - 1.000 - - - amelogenin, X-linked [Source:MGI Symbol;Acc:MGI:88005]
12. Gm8839 ENSMUSG00000083830 6 1 - - 1.000 - - - predicted gene 8839 [Source:MGI Symbol;Acc:MGI:3647576]
13. Gm12945 ENSMUSG00000087394 0 1 - - 1.000 - - - predicted gene 12945 [Source:MGI Symbol;Acc:MGI:3704237]
14. A730071L15Rik ENSMUSG00000096923 22 1 - - 1.000 - - - RIKEN cDNA A730071L15Rik gene [Source:MGI Symbol;Acc:MGI:3642498]
15. Nodal ENSMUSG00000037171 6 1 - - 1.000 - - - nodal [Source:MGI Symbol;Acc:MGI:97359]
16. Gm14812 ENSMUSG00000073051 1 1 - - 1.000 - - - predicted gene 14812 [Source:MGI Symbol;Acc:MGI:3642165]
17. Htr3a ENSMUSG00000032269 11 1 - - 1.000 - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:MGI Symbol;Acc:MGI:96282]
18. Gm13110 ENSMUSG00000086810 1 1 - - 1.000 - - - predicted gene 13110 [Source:MGI Symbol;Acc:MGI:3651716]
19. Noto ENSMUSG00000068302 0 1 - - 1.000 - - - notochord homeobox [Source:MGI Symbol;Acc:MGI:3053002]
20. Iqch ENSMUSG00000037801 19 1 - - 1.000 - - - IQ motif containing H [Source:MGI Symbol;Acc:MGI:1925500]
21. Rbp2 ENSMUSG00000032454 0 1 - - 1.000 - - - retinol binding protein 2, cellular [Source:MGI Symbol;Acc:MGI:97877]
22. 3110067C02Rik ENSMUSG00000081187 5 1 - - 1.000 - - - RIKEN cDNA 3110067C02 gene [Source:MGI Symbol;Acc:MGI:1920452]
23. Ptma-ps1 ENSMUSG00000095331 29 1 - - 1.000 - - - prothymosin alpha, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3644252]
24. Gm14393 ENSMUSG00000078905 2 1 - - 1.000 - - - predicted gene 14393 [Source:MGI Symbol;Acc:MGI:3649576]
25. Rnase6 ENSMUSG00000021880 4 1 - - 1.000 - - - ribonuclease, RNase A family, 6 [Source:MGI Symbol;Acc:MGI:1925666]
26. Bex6 ENSMUSG00000075269 7 1 - - 1.000 - - - brain expressed family member 6 [Source:MGI Symbol;Acc:MGI:3588247]
27. Rpl35a-ps6 ENSMUSG00000094664 0 1 - - 1.000 - - - ribosomal protein L35A, pseudogene 6 [Source:MGI Symbol;Acc:MGI:3704258]
28. Gm26598 Gm26598 5 1 - - 1.000 - - -
29. Gm17082 ENSMUSG00000090674 0 1 - - 1.000 - - - predicted gene 17082 [Source:MGI Symbol;Acc:MGI:4937909]
30. 4930578C19Rik ENSMUSG00000037358 0 1 - - 1.000 - - - RIKEN cDNA 4930578C19 gene [Source:MGI Symbol;Acc:MGI:1923155]
31. Galnt2 ENSMUSG00000089704 5 1 - - 1.000 - - - polypeptide N-acetylgalactosaminyltransferase 2 [Source:MGI Symbol;Acc:MGI:894694]
32. Scn10a ENSMUSG00000034533 2 1 - - 1.000 - - - sodium channel, voltage-gated, type X, alpha [Source:MGI Symbol;Acc:MGI:108029]
33. S100a9 ENSMUSG00000056071 48 1 - - 1.000 - - - S100 calcium binding protein A9 (calgranulin B) [Source:MGI Symbol;Acc:MGI:1338947]
34. Gucy2e ENSMUSG00000020890 7 1 - - 1.000 - - - guanylate cyclase 2e [Source:MGI Symbol;Acc:MGI:105123]
35. Gm13428 ENSMUSG00000081496 0 1 - - 1.000 - - - predicted gene 13428 [Source:MGI Symbol;Acc:MGI:3649767]
36. Adad2 ENSMUSG00000024266 0 1 - - 1.000 - - - adenosine deaminase domain containing 2 [Source:MGI Symbol;Acc:MGI:1923023]
37. Gm26573 ENSMUSG00000096958, ENSMUSG00000116495 21 1 - - 1.000 - - - predicted gene, 26573 [Source:MGI Symbol;Acc:MGI:5477067]
38. Xlr ENSMUSG00000054626 5 0.961 - - 0.961 - - - X-linked lymphocyte-regulated [Source:MGI Symbol;Acc:MGI:98976]
39. AI467606 ENSMUSG00000045165 24 0.933 - - 0.933 - - - expressed sequence AI467606 [Source:MGI Symbol;Acc:MGI:2141979]
40. 9230115E21Rik 9230115E21Rik 1 0.928 - - 0.928 - - -
41. Gm13154 25 0.923 - - 0.923 - - - predicted gene 13154, transcript variant X1
42. Gm17067 ENSMUSG00000091594 8 0.918 - - 0.918 - - - predicted gene 17067 [Source:MGI Symbol;Acc:MGI:4937894]
43. Gm5065 ENSMUSG00000048398 3 0.918 - - 0.918 - - - predicted gene 5065 [Source:MGI Symbol;Acc:MGI:3643170]
44. Hc ENSMUSG00000026874 12 0.918 - - 0.918 - - - hemolytic complement [Source:MGI Symbol;Acc:MGI:96031]
45. Mar-03 Mar-03 8 0.918 - - 0.918 - - -
46. Gm26536 ENSMUSG00000097501 2 0.918 - - 0.918 - - - predicted gene, 26536 [Source:MGI Symbol;Acc:MGI:5477030]
47. Foxg1 ENSMUSG00000020950 1 0.918 - - 0.918 - - - forkhead box G1 [Source:MGI Symbol;Acc:MGI:1347464]
48. Ifltd1 Ifltd1 11 0.918 - - 0.918 - - -
49. Pinlyp ENSMUSG00000011632 3 0.918 - - 0.918 - - - phospholipase A2 inhibitor and LY6/PLAUR domain containing [Source:MGI Symbol;Acc:MGI:3615324]
50. Zfp964 ENSMUSG00000091764 2 0.918 - - 0.918 - - - zinc finger protein 964 [Source:MGI Symbol;Acc:MGI:3646490]
51. Mnda 5 0.888 - - 0.888 - - - myeloid cell nuclear differentiation antigen, transcript variant X1
52. U90926 ENSMUSG00000029409 16 0.888 - - 0.888 - - - cDNA sequence U90926 [Source:MGI Symbol;Acc:MGI:1930915]
53. Trap1a ENSMUSG00000051257 8 0.888 - - 0.888 - - - tumor rejection antigen P1A [Source:MGI Symbol;Acc:MGI:98818]
54. Gm5215 ENSMUSG00000050978 1 0.888 - - 0.888 - - - predicted gene 5215 [Source:MGI Symbol;Acc:MGI:3644834]
55. 4933405L10Rik ENSMUSG00000013158 5 0.887 0.887 - - - - - RIKEN cDNA 4933405L10 gene [Source:MGI Symbol;Acc:MGI:1918296]
56. Ccl2 ENSMUSG00000035385 2 0.887 0.887 - - - - - chemokine (C-C motif) ligand 2 [Source:MGI Symbol;Acc:MGI:98259]
57. Hmgb1-ps3 ENSMUSG00000081455 5 0.887 0.887 - - - - - high mobility group box 1, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3768539]
58. 1700125H20Rik ENSMUSG00000018479 5 0.887 0.887 - - - - - RIKEN cDNA 1700125H20 gene [Source:MGI Symbol;Acc:MGI:1920884]
59. Gm12043 ENSMUSG00000087253 6 0.887 0.887 - - - - - predicted gene 12043 [Source:MGI Symbol;Acc:MGI:3651843]
60. Gm12057 ENSMUSG00000084081 4 0.887 0.887 - - - - - predicted gene 12057 [Source:MGI Symbol;Acc:MGI:3650030]
61. 4930539E08Rik ENSMUSG00000048905 9 0.887 0.887 - - - - - RIKEN cDNA 4930539E08 gene [Source:MGI Symbol;Acc:MGI:1925441]
62. Grifin ENSMUSG00000036586 6 0.887 0.887 - - - - - galectin-related inter-fiber protein [Source:MGI Symbol;Acc:MGI:1925248]
63. Gm12264 ENSMUSG00000086536 3 0.887 0.887 - - - - - predicted gene 12264 [Source:MGI Symbol;Acc:MGI:3702404]
64. Htr1b ENSMUSG00000049511 77 0.887 0.887 - - - - - 5-hydroxytryptamine (serotonin) receptor 1B [Source:MGI Symbol;Acc:MGI:96274]
65. F630040L22Rik F630040L22Rik 4 0.887 0.887 - - - - -
66. Gm10232 ENSMUSG00000068141 4 0.887 0.887 - - - - - predicted pseudogene 10232 [Source:MGI Symbol;Acc:MGI:3641637]
67. Slc6a12 ENSMUSG00000030109 2 0.887 0.887 - - - - - solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12 [Source:MGI Symbol;Acc:MGI:95628]
68. Gm12902 ENSMUSG00000082515 1 0.887 0.887 - - - - - predicted gene 12902 [Source:MGI Symbol;Acc:MGI:3650399]
69. Dhh ENSMUSG00000023000 23 0.887 0.887 - - - - - desert hedgehog [Source:MGI Symbol;Acc:MGI:94891]
70. Skint4 ENSMUSG00000055960 4 0.887 0.887 - - - - - selection and upkeep of intraepithelial T cells 4 [Source:MGI Symbol;Acc:MGI:2444425]
71. Rasgrf2 ENSMUSG00000021708 16 0.887 0.887 - - - - - RAS protein-specific guanine nucleotide-releasing factor 2 [Source:MGI Symbol;Acc:MGI:109137]
72. Triml2 ENSMUSG00000091490 3 0.887 0.887 - - - - - tripartite motif family-like 2 [Source:MGI Symbol;Acc:MGI:3642989]
73. Gm9041 Gm9041 1 0.887 0.887 - - - - -
74. Fcer2a ENSMUSG00000005540 20 0.887 0.887 - - - - - Fc receptor, IgE, low affinity II, alpha polypeptide [Source:MGI Symbol;Acc:MGI:95497]
75. Gm10430 Gm10430 4 0.887 0.887 - - - - -
76. A930028C08Rik A930028C08Rik 2 0.887 0.887 - - - - -
77. Fam46d 4 0.887 0.887 - - - - - family with sequence similarity 46, member D, transcript variant X1
78. Gm16335 ENSMUSG00000085340 1 0.887 0.887 - - - - - predicted gene 16335 [Source:MGI Symbol;Acc:MGI:3840152]
79. Gm10304 Gm10304 25 0.884 - - 0.884 - - -
80. Ankrd34b ENSMUSG00000045034 17 0.88 0.880 - - - - - ankyrin repeat domain 34B [Source:MGI Symbol;Acc:MGI:2443245]
81. Hmgb1-ps1 ENSMUSG00000084129 4 0.876 - - - - 0.876 - high mobility group box 1, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3768536]
82. Gm16192 ENSMUSG00000086773 1 0.866 - - 0.866 - - - predicted gene 16192 [Source:MGI Symbol;Acc:MGI:3802024]
83. Vrtn ENSMUSG00000071235 3 0.866 - - 0.866 - - - vertebrae development associated [Source:MGI Symbol;Acc:MGI:3588197]
84. Ltb ENSMUSG00000024399 2 0.866 - - 0.866 - - - lymphotoxin B [Source:MGI Symbol;Acc:MGI:104796]
85. Usp29 ENSMUSG00000051527 13 0.866 - - 0.866 - - - ubiquitin specific peptidase 29 [Source:MGI Symbol;Acc:MGI:1888998]
86. Gm8526 ENSMUSG00000057685 6 0.866 - - 0.866 - - - predicted gene 8526 [Source:MGI Symbol;Acc:MGI:3645225]
87. Lilrb4 Lilrb4 13 0.866 - - 0.866 - - -
88. Gbp2b ENSMUSG00000040264 14 0.866 - - 0.866 - - - guanylate binding protein 2b [Source:MGI Symbol;Acc:MGI:95666]
89. Gm10154 ENSMUSG00000066116 7 0.866 - - 0.866 - - - predicted gene 10154 [Source:MGI Symbol;Acc:MGI:3642271]
90. 4921507G05Rik ENSMUSG00000097650 5 0.859 0.859 - - - - - RIKEN cDNA 4921507G05 gene [Source:MGI Symbol;Acc:MGI:1913959]
91. Wfdc3 ENSMUSG00000076434 12 0.859 0.859 - - - - - WAP four-disulfide core domain 3 [Source:MGI Symbol;Acc:MGI:1923897]
92. Gm15253 Gm15253 199 0.855 - - 0.855 - - -
93. Gm15013 ENSMUSG00000098559 3 0.854 - - 0.854 - - - predicted gene 15013 [Source:MGI Symbol;Acc:MGI:3644991]
94. Taf7l ENSMUSG00000009596 11 0.844 - - 0.844 - - - TATA-box binding protein associated factor 7 like [Source:MGI Symbol;Acc:MGI:1921719]
95. Gm10474 Gm10474 7 0.844 - - 0.844 - - -
96. C130050O18Rik ENSMUSG00000044092 7 0.844 - - 0.844 - - - RIKEN cDNA C130050O18 gene [Source:MGI Symbol;Acc:MGI:2442694]
97. Rpl28-ps3 ENSMUSG00000079942 55 0.839 0.839 - - - - - ribosomal protein L28, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3650282]
98. C030034L19Rik ENSMUSG00000097365 6 0.833 - - 0.833 - - - RIKEN cDNA C030034L19 gene [Source:MGI Symbol;Acc:MGI:2444519]
99. Gm11231 ENSMUSG00000082432 1 0.833 - - 0.833 - - - predicted gene 11231 [Source:MGI Symbol;Acc:MGI:3650253]
100. Sp110 ENSMUSG00000070034 5 0.833 - - 0.833 - - - Sp110 nuclear body protein [Source:MGI Symbol;Acc:MGI:1923364]

There are 106 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA