Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Col8a1

Gene Name Gene ID Reads Annotation
Col8a1 ENSMUSG00000068196 138 collagen, type VIII, alpha 1 [Source:MGI Symbol;Acc:MGI:88463]







Genes with expression patterns similar to Col8a1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Col8a1 ENSMUSG00000068196 138 6 1.000 1.000 1.000 1.000 1.000 1.000 collagen, type VIII, alpha 1 [Source:MGI Symbol;Acc:MGI:88463]
2. 4921536K21Rik ENSMUSG00000020434 25 0.87 - - - - - 0.870 RIKEN cDNA 4921536K21 gene [Source:MGI Symbol;Acc:MGI:1914680]
3. Gon4l ENSMUSG00000054199 31 0.865 - - - - - 0.865 gon-4-like (C.elegans) [Source:MGI Symbol;Acc:MGI:1917579]
4. Btn2a2 ENSMUSG00000053216 12 0.841 0.841 - - - - - butyrophilin, subfamily 2, member A2 [Source:MGI Symbol;Acc:MGI:3606486]
5. Ms4a7 ENSMUSG00000024672 4 0.841 0.841 - - - - - membrane-spanning 4-domains, subfamily A, member 7 [Source:MGI Symbol;Acc:MGI:1918846]
6. Tex38 ENSMUSG00000044556 11 0.785 - 0.785 - - - - testis expressed 38 [Source:MGI Symbol;Acc:MGI:1922423]
7. Cdnf ENSMUSG00000039496 5 0.775 - - 0.775 - - - cerebral dopamine neurotrophic factor [Source:MGI Symbol;Acc:MGI:3606576]
8. Gm13231 ENSMUSG00000081885 4 0.768 0.768 - - - - - predicted gene 13231 [Source:MGI Symbol;Acc:MGI:3649243]
9. Slc4a11 ENSMUSG00000074796 13 0.764 - - - - - 0.764 solute carrier family 4, sodium bicarbonate transporter-like, member 11 [Source:MGI Symbol;Acc:MGI:2138987]
10. Barx1 ENSMUSG00000021381 751 0.758 - - 0.758 - - - BarH-like homeobox 1 [Source:MGI Symbol;Acc:MGI:103124]
11. Hs3st5 ENSMUSG00000044499 26 0.749 - - - - - 0.749 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 [Source:MGI Symbol;Acc:MGI:2441996]
12. Gm6316 ENSMUSG00000078370 16 0.748 0.748 - - - - - predicted pseudogene 6316 [Source:MGI Symbol;Acc:MGI:3646088]
13. Gm15289 ENSMUSG00000082258 13 0.747 - 0.747 - - - - predicted gene 15289 [Source:MGI Symbol;Acc:MGI:3705710]
14. Gsc2 ENSMUSG00000022738 13 0.746 - - 0.746 - - - goosecoid homebox 2 [Source:MGI Symbol;Acc:MGI:892006]
15. Slc9a7 ENSMUSG00000037341 5 0.745 - - - - - 0.745 solute carrier family 9 (sodium/hydrogen exchanger), member 7 [Source:MGI Symbol;Acc:MGI:2444530]
16. Zmat4 ENSMUSG00000037492 118 0.743 - - 0.743 - - - zinc finger, matrin type 4 [Source:MGI Symbol;Acc:MGI:2443497]
17. Gm15379 ENSMUSG00000082208 0 0.735 - - 0.735 - - - predicted gene 15379 [Source:MGI Symbol;Acc:MGI:3705643]
18. Piezo1 ENSMUSG00000014444 4 0.735 - - 0.735 - - - piezo-type mechanosensitive ion channel component 1 [Source:MGI Symbol;Acc:MGI:3603204]
19. Krt25 ENSMUSG00000035831 4 0.735 - - 0.735 - - - keratin 25 [Source:MGI Symbol;Acc:MGI:1918060]
20. Gm12870 ENSMUSG00000082279 0 0.735 - - 0.735 - - - predicted gene 12870 [Source:MGI Symbol;Acc:MGI:3649408]
21. 4932441J04Rik ENSMUSG00000097216 5 0.735 - - 0.735 - - - RIKEN cDNA 4932441J04 gene [Source:MGI Symbol;Acc:MGI:2441691]
22. Apol6 ENSMUSG00000033576 1 0.735 - - 0.735 - - - apolipoprotein L 6 [Source:MGI Symbol;Acc:MGI:1919189]
23. Gm14508 ENSMUSG00000085376 1 0.735 - - 0.735 - - - predicted gene 14508 [Source:MGI Symbol;Acc:MGI:3705279]
24. Gm7290 ENSMUSG00000078192 8 0.735 - - 0.735 - - - predicted pseudogene 7290 [Source:MGI Symbol;Acc:MGI:3646633]
25. Gm23680 ENSMUSG00000065096 0 0.735 - - 0.735 - - - predicted gene, 23680 [Source:MGI Symbol;Acc:MGI:5453457]
26. Gm15246 ENSMUSG00000087159 6 0.735 - - 0.735 - - - predicted gene 15246 [Source:MGI Symbol;Acc:MGI:3708120]
27. Ifit3 ENSMUSG00000074896 4 0.735 - - 0.735 - - - interferon-induced protein with tetratricopeptide repeats 3 [Source:MGI Symbol;Acc:MGI:1101055]
28. Gm13617 ENSMUSG00000085160 0 0.735 - - 0.735 - - - predicted gene 13617 [Source:MGI Symbol;Acc:MGI:3650300]
29. 2410019O14Rik 2410019O14Rik 5 0.735 - - 0.735 - - -
30. Gm13528 ENSMUSG00000085087 2 0.735 - - 0.735 - - - predicted gene 13528 [Source:MGI Symbol;Acc:MGI:3651630]
31. Mycs ENSMUSG00000044597 1 0.735 - - 0.735 - - - myc-like oncogene, s-myc protein [Source:MGI Symbol;Acc:MGI:1332242]
32. Gm5054 ENSMUSG00000083812 1 0.735 - - 0.735 - - - predicted gene 5054 [Source:MGI Symbol;Acc:MGI:3649024]
33. Slco6d1 ENSMUSG00000026336 1 0.735 - - 0.735 - - - solute carrier organic anion transporter family, member 6d1 [Source:MGI Symbol;Acc:MGI:1918116]
34. Gm26729 ENSMUSG00000097116 0 0.735 - - 0.735 - - - predicted gene, 26729 [Source:MGI Symbol;Acc:MGI:5477223]
35. Gm23248 ENSMUSG00000065301 1 0.735 - - 0.735 - - - predicted gene, 23248 [Source:MGI Symbol;Acc:MGI:5453025]
36. 5033417F24Rik ENSMUSG00000097251 2 0.735 - - 0.735 - - - RIKEN cDNA 5033417F24 gene [Source:MGI Symbol;Acc:MGI:1923245]
37. Smco2 ENSMUSG00000030292 1 0.735 - - 0.735 - - - single-pass membrane protein with coiled-coil domains 2 [Source:MGI Symbol;Acc:MGI:1916621]
38. Agr2 ENSMUSG00000020581 4 0.735 - - 0.735 - - - anterior gradient 2 [Source:MGI Symbol;Acc:MGI:1344405]
39. Itgax ENSMUSG00000030789 7 0.735 - - 0.735 - - - integrin alpha X [Source:MGI Symbol;Acc:MGI:96609]
40. Cyp7a1 ENSMUSG00000028240 2 0.735 - - 0.735 - - - cytochrome P450, family 7, subfamily a, polypeptide 1 [Source:MGI Symbol;Acc:MGI:106091]
41. Gm15221 ENSMUSG00000086168 5 0.735 - - 0.735 - - - predicted gene 15221 [Source:MGI Symbol;Acc:MGI:3705247]
42. Mageb3 ENSMUSG00000074881 8 0.735 - - 0.735 - - - melanoma antigen, family B, 3 [Source:MGI Symbol;Acc:MGI:105109]
43. Abra ENSMUSG00000042895 4 0.735 - - 0.735 - - - actin-binding Rho activating protein [Source:MGI Symbol;Acc:MGI:2444891]
44. Cct8l1 ENSMUSG00000038044 0 0.735 - - 0.735 - - - chaperonin containing TCP1, subunit 8 (theta)-like 1 [Source:MGI Symbol;Acc:MGI:2685289]
45. Btc ENSMUSG00000082361 2 0.735 - - 0.735 - - - betacellulin, epidermal growth factor family member [Source:MGI Symbol;Acc:MGI:99439]
46. Slc7a15 ENSMUSG00000020600 1 0.735 - - 0.735 - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 15 [Source:MGI Symbol;Acc:MGI:3045351]
47. 4930562A09Rik ENSMUSG00000086945 0 0.735 - - 0.735 - - - RIKEN cDNA 4930562A09 gene [Source:MGI Symbol;Acc:MGI:1922553]
48. Ear1 ENSMUSG00000072601 4 0.735 - - 0.735 - - - eosinophil-associated, ribonuclease A family, member 1 [Source:MGI Symbol;Acc:MGI:108021]
49. Gm9703 ENSMUSG00000082741 6 0.735 - - 0.735 - - - predicted gene 9703 [Source:MGI Symbol;Acc:MGI:3780110]
50. Gm12932 ENSMUSG00000086342 2 0.735 - - 0.735 - - - predicted gene 12932 [Source:MGI Symbol;Acc:MGI:3651151]
51. 4930509E16Rik ENSMUSG00000096986 6 0.735 - - 0.735 - - - RIKEN cDNA 4930509E16 gene [Source:MGI Symbol;Acc:MGI:1922365]
52. Xlr5a ENSMUSG00000058328 0 0.735 - - 0.735 - - - X-linked lymphocyte-regulated 5A [Source:MGI Symbol;Acc:MGI:3574108]
53. Gdpd2 ENSMUSG00000019359 31 0.73 - 0.730 - - - - glycerophosphodiester phosphodiesterase domain containing 2 [Source:MGI Symbol;Acc:MGI:1918834]
54. Gm7129 ENSMUSG00000080914 10 0.728 - - 0.728 - - - predicted gene 7129 [Source:MGI Symbol;Acc:MGI:3648820]
55. 6530402F18Rik ENSMUSG00000079499 19 0.728 - - 0.728 - - - RIKEN cDNA 6530402F18 gene [Source:MGI Symbol;Acc:MGI:1923470]
56. DLEU2 DLEU2 3 0.722 0.722 - - - - -
57. Gm20091 ENSMUSG00000094249 2 0.722 0.722 - - - - - predicted gene, 20091 [Source:MGI Symbol;Acc:MGI:5012276]
58. Gm13010 ENSMUSG00000086845 3 0.722 0.722 - - - - - predicted gene 13010 [Source:MGI Symbol;Acc:MGI:3651180]
59. Gm26623 ENSMUSG00000097703 1 0.722 0.722 - - - - - predicted gene, 26623 [Source:MGI Symbol;Acc:MGI:5477117]
60. Snora2b ENSMUSG00000065939 3 0.722 0.722 - - - - - small nucleolar RNA, H/ACA box 2B [Source:MGI Symbol;Acc:MGI:3819497]
61. Padi3 ENSMUSG00000025328 7 0.722 0.722 - - - - - peptidyl arginine deiminase, type III [Source:MGI Symbol;Acc:MGI:1338891]
62. Gm15787 ENSMUSG00000086247 4 0.722 0.722 - - - - - predicted gene 15787 [Source:MGI Symbol;Acc:MGI:3783229]
63. Gm2832 ENSMUSG00000091110 10 0.722 0.722 - - - - - predicted gene 2832 [Source:MGI Symbol;Acc:MGI:3781004]
64. Atp13a4 ENSMUSG00000038094 7 0.722 0.722 - - - - - ATPase type 13A4 [Source:MGI Symbol;Acc:MGI:1924456]
65. Gm15850 ENSMUSG00000086264 7 0.722 0.722 - - - - - predicted gene 15850 [Source:MGI Symbol;Acc:MGI:3801986]
66. Gabrr1 ENSMUSG00000028280 1 0.722 0.722 - - - - - gamma-aminobutyric acid (GABA) C receptor, subunit rho 1 [Source:MGI Symbol;Acc:MGI:95625]
67. Avpr1a ENSMUSG00000020123 14 0.722 0.722 - - - - - arginine vasopressin receptor 1A [Source:MGI Symbol;Acc:MGI:1859216]
68. Tmprss13 ENSMUSG00000037129 4 0.722 0.722 - - - - - transmembrane protease, serine 13 [Source:MGI Symbol;Acc:MGI:2682935]
69. Gm20386 ENSMUSG00000092603 9 0.722 0.722 - - - - - predicted gene 20386 [Source:MGI Symbol;Acc:MGI:5141851]
70. Gm13828 ENSMUSG00000083182 2 0.722 0.722 - - - - - predicted gene 13828 [Source:MGI Symbol;Acc:MGI:3651756]
71. Olfr1496 ENSMUSG00000048356 1 0.722 0.722 - - - - - olfactory receptor 1496 [Source:MGI Symbol;Acc:MGI:3031330]
72. Tmem171 ENSMUSG00000052485 17 0.722 0.722 - - - - - transmembrane protein 171 [Source:MGI Symbol;Acc:MGI:2685751]
73. Gm13857 ENSMUSG00000084965 3 0.722 0.722 - - - - - predicted gene 13857 [Source:MGI Symbol;Acc:MGI:3649688]
74. Gm14403 ENSMUSG00000094786 4 0.722 0.722 - - - - - predicted gene 14403 [Source:MGI Symbol;Acc:MGI:3649813]
75. Gm8662 ENSMUSG00000081797 1 0.722 0.722 - - - - - predicted gene 8662 [Source:MGI Symbol;Acc:MGI:3645694]
76. Rny1 ENSMUSG00000065701 18 0.722 0.722 - - - - - RNA, Y1 small cytoplasmic, Ro-associated [Source:MGI Symbol;Acc:MGI:97995]
77. Gm10912 ENSMUSG00000078091 9 0.722 0.722 - - - - - predicted gene 10912 [Source:MGI Symbol;Acc:MGI:3809094]
78. Gm13643 Gm13643 3 0.722 0.722 - - - - -
79. Ccdc11 Ccdc11 17 0.722 0.722 - - - - -
80. Gm2895 ENSMUSG00000091412 1 0.722 0.722 - - - - - predicted gene 2895 [Source:MGI Symbol;Acc:MGI:3781073]
81. Oca2 ENSMUSG00000030450 8 0.722 0.722 - - - - - oculocutaneous albinism II [Source:MGI Symbol;Acc:MGI:97454]
82. 1110018N20Rik ENSMUSG00000085151 4 0.722 0.722 - - - - - RIKEN cDNA 1110018N20 gene [Source:MGI Symbol;Acc:MGI:1915753]
83. Chml ENSMUSG00000078185 7 0.722 0.722 - - - - - choroideremia-like [Source:MGI Symbol;Acc:MGI:101913]
84. Gm14258 ENSMUSG00000086238 1 0.722 0.722 - - - - - predicted gene 14258 [Source:MGI Symbol;Acc:MGI:3652141]
85. Serpinb9e ENSMUSG00000062342 1 0.722 0.722 - - - - - serine (or cysteine) peptidase inhibitor, clade B, member 9e [Source:MGI Symbol;Acc:MGI:894672]
86. Gm17096 ENSMUSG00000090397 4 0.722 0.722 - - - - - predicted gene 17096 [Source:MGI Symbol;Acc:MGI:4937923]
87. 1700030M09Rik ENSMUSG00000097424 12 0.722 0.722 - - - - - RIKEN cDNA 1700030M09 gene [Source:MGI Symbol;Acc:MGI:1919509]
88. Faim3 Faim3 16 0.722 0.722 - - - - -
89. Gm8529 ENSMUSG00000098058 5 0.722 0.722 - - - - - predicted gene 8529 [Source:MGI Symbol;Acc:MGI:3645224]
90. Gm13726 ENSMUSG00000081719 4 0.722 0.722 - - - - - predicted gene 13726 [Source:MGI Symbol;Acc:MGI:3649259]
91. Vmn1r90 ENSMUSG00000100586 14 0.721 0.721 - - - - - vomeronasal 1 receptor 90 [Source:MGI Symbol;Acc:MGI:3612342]
92. Dscam ENSMUSG00000050272 24 0.718 0.718 - - - - - DS cell adhesion molecule [Source:MGI Symbol;Acc:MGI:1196281]
93. Clnk ENSMUSG00000039315 4 0.713 - - - - - 0.713 cytokine-dependent hematopoietic cell linker [Source:MGI Symbol;Acc:MGI:1351468]
94. Pla1a ENSMUSG00000002847 3 0.713 - - - - - 0.713 phospholipase A1 member A [Source:MGI Symbol;Acc:MGI:1934677]
95. Plg ENSMUSG00000059481 37 0.713 - - - - - 0.713 plasminogen [Source:MGI Symbol;Acc:MGI:97620]
96. Grin1 ENSMUSG00000026959 19 0.713 - - - - - 0.713 glutamate receptor, ionotropic, NMDA1 (zeta 1) [Source:MGI Symbol;Acc:MGI:95819]
97. Gm13751 ENSMUSG00000080817 1 0.713 - - - - - 0.713 predicted gene 13751 [Source:MGI Symbol;Acc:MGI:3650600]
98. Gm12035 ENSMUSG00000083555 23 0.713 - - - - - 0.713 predicted gene 12035 [Source:MGI Symbol;Acc:MGI:3651599]
99. Prrxl1 ENSMUSG00000041730 4 0.713 - - - - - 0.713 paired related homeobox protein-like 1 [Source:MGI Symbol;Acc:MGI:2148204]
100. Gm8394 ENSMUSG00000050490 3 0.713 - - - - - 0.713 predicted gene 8394 [Source:MGI Symbol;Acc:MGI:3647964]

There are 30 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA