Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Chd1

Gene Name Gene ID Reads Annotation
Chd1 ENSMUSG00000023852 3152 chromodomain helicase DNA binding protein 1 [Source:MGI Symbol;Acc:MGI:88393]







Genes with expression patterns similar to Chd1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Chd1 ENSMUSG00000023852 3152 6 1.000 1.000 1.000 1.000 1.000 1.000 chromodomain helicase DNA binding protein 1 [Source:MGI Symbol;Acc:MGI:88393]
2. Wdr11 ENSMUSG00000042055 1393 1.541 - - - - 0.792 0.749 WD repeat domain 11 [Source:MGI Symbol;Acc:MGI:1920230]
3. Acp2 ENSMUSG00000002103 1293 1.492 - - - - 0.744 0.748 acid phosphatase 2, lysosomal [Source:MGI Symbol;Acc:MGI:87882]
4. Atp8a1 ENSMUSG00000037685 1155 1.484 - - - - 0.743 0.741 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 [Source:MGI Symbol;Acc:MGI:1330848]
5. Cggbp1 ENSMUSG00000054604 5693 1.453 - 0.728 - - - 0.725 CGG triplet repeat binding protein 1 [Source:MGI Symbol;Acc:MGI:2146370]
6. Sypl ENSMUSG00000020570 2548 0.836 - - - - - 0.836 synaptophysin-like protein [Source:MGI Symbol;Acc:MGI:108081]
7. Dennd1a ENSMUSG00000035392 1250 0.833 - - - - - 0.833 DENN/MADD domain containing 1A [Source:MGI Symbol;Acc:MGI:2442794]
8. Usp50 ENSMUSG00000027364 304 0.827 - - - - - 0.827 ubiquitin specific peptidase 50 [Source:MGI Symbol;Acc:MGI:1922333]
9. Homer3 ENSMUSG00000003573 2190 0.818 - - - - - 0.818 homer scaffolding protein 3 [Source:MGI Symbol;Acc:MGI:1347359]
10. Cdca8 ENSMUSG00000028873 5637 0.818 - - - - - 0.818 cell division cycle associated 8 [Source:MGI Symbol;Acc:MGI:1196274]
11. Gucd1 ENSMUSG00000033416 864 0.816 - - - - - 0.816 guanylyl cyclase domain containing 1 [Source:MGI Symbol;Acc:MGI:1916028]
12. Brms1 ENSMUSG00000080268 492 0.814 - - - - - 0.814 breast cancer metastasis-suppressor 1 [Source:MGI Symbol;Acc:MGI:2388804]
13. Zfp820 ENSMUSG00000069743 854 0.813 - - - - - 0.813 zinc finger protein 820 [Source:MGI Symbol;Acc:MGI:1922674]
14. Rbbp5 ENSMUSG00000026439 3721 0.803 - - - - 0.803 - retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit [Source:MGI Symbol;Acc:MGI:1918367]
15. Mrpl37 ENSMUSG00000028622 2555 0.803 - - - - - 0.803 mitochondrial ribosomal protein L37 [Source:MGI Symbol;Acc:MGI:1926268]
16. Sema6d ENSMUSG00000027200 1413 0.801 - - - - - 0.801 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:MGI Symbol;Acc:MGI:2387661]
17. Papd5 ENSMUSG00000036779 1511 0.801 - - - - - 0.801 PAP associated domain containing 5 [Source:MGI Symbol;Acc:MGI:1917820]
18. Cep72 ENSMUSG00000021572 1038 0.8 - - - - 0.800 - centrosomal protein 72 [Source:MGI Symbol;Acc:MGI:1921720]
19. Ercc2 ENSMUSG00000030400 1493 0.8 - - - - - 0.800 excision repair cross-complementing rodent repair deficiency, complementation group 2 [Source:MGI Symbol;Acc:MGI:95413]
20. Dnaja3 ENSMUSG00000004069 1974 0.799 - - - - 0.799 - DnaJ heat shock protein family (Hsp40) member A3 [Source:MGI Symbol;Acc:MGI:1933786]
21. Nsl1 ENSMUSG00000062510 625 0.796 - - - - 0.796 - NSL1, MIS12 kinetochore complex component [Source:MGI Symbol;Acc:MGI:2685830]
22. Fancl ENSMUSG00000004018 569 0.795 - - - - - 0.795 Fanconi anemia, complementation group L [Source:MGI Symbol;Acc:MGI:1914280]
23. Pak4 ENSMUSG00000030602 1778 0.794 - - - - - 0.794 p21 (RAC1) activated kinase 4 [Source:MGI Symbol;Acc:MGI:1917834]
24. Ppfia1 ENSMUSG00000037519 3319 0.794 - - - - - 0.794 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 [Source:MGI Symbol;Acc:MGI:1924750]
25. Usp16 ENSMUSG00000025616 1330 0.791 - - - - - 0.791 ubiquitin specific peptidase 16 [Source:MGI Symbol;Acc:MGI:1921362]
26. Kcp ENSMUSG00000059022 1374 0.791 - - - - - 0.791 kielin/chordin-like protein [Source:MGI Symbol;Acc:MGI:2141640]
27. Rufy2 ENSMUSG00000020070 1150 0.789 - - - - - 0.789 RUN and FYVE domain-containing 2 [Source:MGI Symbol;Acc:MGI:1917682]
28. Riok1 ENSMUSG00000021428 1563 0.789 - - - - - 0.789 RIO kinase 1 [Source:MGI Symbol;Acc:MGI:1918590]
29. Ids ENSMUSG00000035847 777 0.788 - - - - - 0.788 iduronate 2-sulfatase [Source:MGI Symbol;Acc:MGI:96417]
30. Prpf38b ENSMUSG00000027881 5873 0.787 - - - - - 0.787 PRP38 pre-mRNA processing factor 38 (yeast) domain containing B [Source:MGI Symbol;Acc:MGI:1914171]
31. Hddc3 ENSMUSG00000030532 213 0.786 - - - - - 0.786 HD domain containing 3 [Source:MGI Symbol;Acc:MGI:1915945]
32. Mcat ENSMUSG00000048755 1758 0.785 - - - - - 0.785 malonyl CoA:ACP acyltransferase (mitochondrial) [Source:MGI Symbol;Acc:MGI:2388651]
33. Zbtb43 ENSMUSG00000026788 901 0.784 - - - - - 0.784 zinc finger and BTB domain containing 43 [Source:MGI Symbol;Acc:MGI:1919084]
34. Blmh ENSMUSG00000020840 2762 0.783 - - - - - 0.783 bleomycin hydrolase [Source:MGI Symbol;Acc:MGI:1345186]
35. Hspbp1 ENSMUSG00000063802 3237 0.783 - - - - - 0.783 HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 [Source:MGI Symbol;Acc:MGI:1913495]
36. Vimp 1184 0.782 - - - - - 0.782 VCP-interacting membrane protein
37. Alkbh4 ENSMUSG00000039754 367 0.782 - - - - - 0.782 alkB homolog 4, lysine demethylase [Source:MGI Symbol;Acc:MGI:1919291]
38. Mcm8 ENSMUSG00000027353 1598 0.781 - - - - - 0.781 minichromosome maintenance 8 homologous recombination repair factor [Source:MGI Symbol;Acc:MGI:1913884]
39. Bcr ENSMUSG00000009681 588 0.781 - - - - - 0.781 breakpoint cluster region [Source:MGI Symbol;Acc:MGI:88141]
40. Amd1 ENSMUSG00000075232 1041 0.781 - - - - - 0.781 S-adenosylmethionine decarboxylase 1 [Source:MGI Symbol;Acc:MGI:88004]
41. Dusp2 ENSMUSG00000027368 534 0.78 - - - - - 0.780 dual specificity phosphatase 2 [Source:MGI Symbol;Acc:MGI:101911]
42. 9130023H24Rik ENSMUSG00000062944 258 0.78 - - - - - 0.780 RIKEN cDNA 9130023H24 gene [Source:MGI Symbol;Acc:MGI:2442738]
43. Nipsnap1 ENSMUSG00000034285 1656 0.778 - - - - - 0.778 nipsnap homolog 1 [Source:MGI Symbol;Acc:MGI:1278344]
44. Gtf2f2 ENSMUSG00000067995 1487 0.778 - - - - - 0.778 general transcription factor IIF, polypeptide 2 [Source:MGI Symbol;Acc:MGI:1915955]
45. Stbd1 ENSMUSG00000047963 377 0.778 - - - - - 0.778 starch binding domain 1 [Source:MGI Symbol;Acc:MGI:1261768]
46. Ufsp1 ENSMUSG00000051502 251 0.778 - - - - - 0.778 UFM1-specific peptidase 1 [Source:MGI Symbol;Acc:MGI:1917490]
47. Cpt2 ENSMUSG00000028607 826 0.778 - - - - - 0.778 carnitine palmitoyltransferase 2 [Source:MGI Symbol;Acc:MGI:109176]
48. Mt2 ENSMUSG00000031762 1817 0.777 - - - - - 0.777 metallothionein 2 [Source:MGI Symbol;Acc:MGI:97172]
49. BC026585 1005 0.777 - - - - - 0.777 cDNA sequence BC026585, transcript variant X1
50. Kdelr2 ENSMUSG00000079111 5472 0.777 - - - - - 0.777 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 [Source:MGI Symbol;Acc:MGI:1914163]
51. Paxbp1 ENSMUSG00000022974 322 0.777 - - - - - 0.777 PAX3 and PAX7 binding protein 1 [Source:MGI Symbol;Acc:MGI:1914617]
52. Mfhas1 ENSMUSG00000070056 2836 0.777 - - - - - 0.777 malignant fibrous histiocytoma amplified sequence 1 [Source:MGI Symbol;Acc:MGI:1098644]
53. Pfkfb2 ENSMUSG00000026409 480 0.776 - - - - - 0.776 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 [Source:MGI Symbol;Acc:MGI:107815]
54. Gm10040 ENSMUSG00000058360 476 0.776 - - - - - 0.776 predicted gene 10040 [Source:MGI Symbol;Acc:MGI:3708676]
55. Trdmt1 ENSMUSG00000026723 391 0.776 - - - - - 0.776 tRNA aspartic acid methyltransferase 1 [Source:MGI Symbol;Acc:MGI:1274787]
56. Rfx1 ENSMUSG00000031706 2325 0.775 - - - - - 0.775 regulatory factor X, 1 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:105982]
57. Ostm1 ENSMUSG00000038280 208 0.775 - - - - - 0.775 osteopetrosis associated transmembrane protein 1 [Source:MGI Symbol;Acc:MGI:2655574]
58. Htr1b ENSMUSG00000049511 77 0.774 - - - - - 0.774 5-hydroxytryptamine (serotonin) receptor 1B [Source:MGI Symbol;Acc:MGI:96274]
59. Il17d ENSMUSG00000050222 119 0.774 - - - - - 0.774 interleukin 17D [Source:MGI Symbol;Acc:MGI:2446510]
60. Trak1 ENSMUSG00000032536 705 0.774 - - - - - 0.774 trafficking protein, kinesin binding 1 [Source:MGI Symbol;Acc:MGI:1914345]
61. Pdp2 ENSMUSG00000048371 637 0.773 - - - - - 0.773 pyruvate dehyrogenase phosphatase catalytic subunit 2 [Source:MGI Symbol;Acc:MGI:1918878]
62. Rmnd5b ENSMUSG00000001054 1393 0.773 - - - - - 0.773 required for meiotic nuclear division 5 homolog B [Source:MGI Symbol;Acc:MGI:1913339]
63. Sh3rf2 ENSMUSG00000057719 60 0.773 - - - - - 0.773 SH3 domain containing ring finger 2 [Source:MGI Symbol;Acc:MGI:2444628]
64. Phf19 ENSMUSG00000026873 83 0.772 - - - - - 0.772 PHD finger protein 19 [Source:MGI Symbol;Acc:MGI:1921266]
65. Hes3 ENSMUSG00000028946 73 0.772 - - - - - 0.772 hes family bHLH transcription factor 3 [Source:MGI Symbol;Acc:MGI:104877]
66. Flnb ENSMUSG00000025278 1102 0.772 - - - - - 0.772 filamin, beta [Source:MGI Symbol;Acc:MGI:2446089]
67. Gm14286 ENSMUSG00000087445 166 0.772 - - - - - 0.772 predicted gene 14286 [Source:MGI Symbol;Acc:MGI:3650190]
68. Cish ENSMUSG00000032578 239 0.772 - - - - - 0.772 cytokine inducible SH2-containing protein [Source:MGI Symbol;Acc:MGI:103159]
69. Gm24451 ENSMUSG00000065287 57 0.772 - - - - - 0.772 predicted gene, 24451 [Source:MGI Symbol;Acc:MGI:5454228]
70. Gm10307 ENSMUSG00000101093 159 0.772 - - - - - 0.772 predicted gene 10307 [Source:MGI Symbol;Acc:MGI:3642371]
71. Zzef1 ENSMUSG00000055670 953 0.771 - - - - - 0.771 zinc finger, ZZ-type with EF hand domain 1 [Source:MGI Symbol;Acc:MGI:2444286]
72. Fut10 ENSMUSG00000046152 702 0.771 - - - - - 0.771 fucosyltransferase 10 [Source:MGI Symbol;Acc:MGI:2384748]
73. Hddc2 ENSMUSG00000000295 1096 0.77 - - - - - 0.770 HD domain containing 2 [Source:MGI Symbol;Acc:MGI:1916942]
74. Phf12 ENSMUSG00000037791 554 0.77 - - - - - 0.770 PHD finger protein 12 [Source:MGI Symbol;Acc:MGI:1924057]
75. Ninl ENSMUSG00000068115 1268 0.77 - - - - - 0.770 ninein-like [Source:MGI Symbol;Acc:MGI:1925427]
76. Twistnb ENSMUSG00000020561 2613 0.77 0.770 - - - - - twist basic helix-loop-helix transcription factor 1 neighbor [Source:MGI Symbol;Acc:MGI:106292]
77. Ipo9 ENSMUSG00000041879 7282 0.77 - - - - - 0.770 importin 9 [Source:MGI Symbol;Acc:MGI:1918944]
78. Fam131a ENSMUSG00000050821 113 0.77 - - - - - 0.770 family with sequence similarity 131, member A [Source:MGI Symbol;Acc:MGI:1925658]
79. Gm15545 ENSMUSG00000087138 252 0.769 - - - - - 0.769 predicted gene 15545 [Source:MGI Symbol;Acc:MGI:3782994]
80. Gm13910 ENSMUSG00000063684 126 0.769 - - - - - 0.769 predicted gene 13910 [Source:MGI Symbol;Acc:MGI:3651143]
81. Chst10 ENSMUSG00000026080 667 0.769 - - - - - 0.769 carbohydrate sulfotransferase 10 [Source:MGI Symbol;Acc:MGI:2138283]
82. Pcdha2 ENSMUSG00000104148 246 0.769 - - - - - 0.769 protocadherin alpha 2 [Source:MGI Symbol;Acc:MGI:2681880]
83. Ctsc ENSMUSG00000030560 650 0.768 - - - - - 0.768 cathepsin C [Source:MGI Symbol;Acc:MGI:109553]
84. Lgr5 ENSMUSG00000020140 516 0.768 - - - - - 0.768 leucine rich repeat containing G protein coupled receptor 5 [Source:MGI Symbol;Acc:MGI:1341817]
85. Lhpp ENSMUSG00000030946 365 0.767 - - - - - 0.767 phospholysine phosphohistidine inorganic pyrophosphate phosphatase [Source:MGI Symbol;Acc:MGI:1923679]
86. Ctla2a ENSMUSG00000044258 507 0.767 - - - - - 0.767 cytotoxic T lymphocyte-associated protein 2 alpha [Source:MGI Symbol;Acc:MGI:88554]
87. Zfyve19 ENSMUSG00000068580 337 0.767 - - - - - 0.767 zinc finger, FYVE domain containing 19 [Source:MGI Symbol;Acc:MGI:1919258]
88. Dfna5 492 0.767 - - - - - 0.767 deafness, autosomal dominant 5 (human), transcript variant X3
89. Notch4 ENSMUSG00000015468 497 0.767 - - - - 0.767 - notch 4 [Source:MGI Symbol;Acc:MGI:107471]
90. Pole2 ENSMUSG00000020974 1305 0.766 - - - - - 0.766 polymerase (DNA directed), epsilon 2 (p59 subunit) [Source:MGI Symbol;Acc:MGI:1197514]
91. Hbb-bs ENSMUSG00000052305 2551 0.766 - - - - - 0.766 hemoglobin, beta adult s chain [Source:MGI Symbol;Acc:MGI:5474852]
92. Acsl6 ENSMUSG00000020333 249 0.765 - - - - - 0.765 acyl-CoA synthetase long-chain family member 6 [Source:MGI Symbol;Acc:MGI:894291]
93. Copg2 ENSMUSG00000025607 692 0.765 - - - - 0.765 - coatomer protein complex, subunit gamma 2 [Source:MGI Symbol;Acc:MGI:1858683]
94. Tnks1bp1 ENSMUSG00000033955 551 0.765 - - - - - 0.765 tankyrase 1 binding protein 1 [Source:MGI Symbol;Acc:MGI:2446193]
95. Ttc7 ENSMUSG00000036918 154 0.764 - - - - - 0.764 tetratricopeptide repeat domain 7 [Source:MGI Symbol;Acc:MGI:1920999]
96. Ftx ENSMUSG00000086370 285 0.764 - - - - - 0.764 Ftx transcript, Xist regulator (non-protein coding) [Source:MGI Symbol;Acc:MGI:1926128]
97. Kif4 ENSMUSG00000034311 2954 0.763 - - - - 0.763 - kinesin family member 4 [Source:MGI Symbol;Acc:MGI:108389]
98. Psmd13 ENSMUSG00000025487 5365 0.763 - - - - - 0.763 proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 [Source:MGI Symbol;Acc:MGI:1345192]
99. Atp6ap1 ENSMUSG00000019087 614 0.762 - - - - - 0.762 ATPase, H+ transporting, lysosomal accessory protein 1 [Source:MGI Symbol;Acc:MGI:109629]
100. Adprm ENSMUSG00000020910 649 0.762 - - - - - 0.762 ADP-ribose/CDP-alcohol diphosphatase, manganese dependent [Source:MGI Symbol;Acc:MGI:1913608]

There are 193 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA