Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Cdh3

Gene Name Gene ID Reads Annotation
Cdh3 ENSMUSG00000061048 2519 cadherin 3 [Source:MGI Symbol;Acc:MGI:88356]







Genes with expression patterns similar to Cdh3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Cdh3 ENSMUSG00000061048 2519 6 1.000 1.000 1.000 1.000 1.000 1.000 cadherin 3 [Source:MGI Symbol;Acc:MGI:88356]
2. Gm24056 ENSMUSG00000089242 346 1.632 0.782 0.850 - - - - predicted gene, 24056 [Source:MGI Symbol;Acc:MGI:5453833]
3. S100a11 ENSMUSG00000027907 7309 1.529 0.758 - 0.771 - - - S100 calcium binding protein A11 [Source:MGI Symbol;Acc:MGI:1338798]
4. Anxa2 ENSMUSG00000032231 4432 1.497 0.734 - 0.763 - - - annexin A2 [Source:MGI Symbol;Acc:MGI:88246]
5. Mre11a ENSMUSG00000031928 1266 0.893 - 0.893 - - - - MRE11A homolog A, double strand break repair nuclease [Source:MGI Symbol;Acc:MGI:1100512]
6. Fbrsl1 ENSMUSG00000043323 2138 0.891 - 0.891 - - - - fibrosin-like 1 [Source:MGI Symbol;Acc:MGI:1920907]
7. Ino80b ENSMUSG00000030034 1676 0.886 - 0.886 - - - - INO80 complex subunit B [Source:MGI Symbol;Acc:MGI:1917270]
8. Ilkap ENSMUSG00000026309 2636 0.882 - 0.882 - - - - integrin-linked kinase-associated serine/threonine phosphatase 2C [Source:MGI Symbol;Acc:MGI:1914694]
9. Map4k2 ENSMUSG00000024948, ENSMUSG00000106850 1019 0.88 - 0.880 - - - - mitogen-activated protein kinase kinase kinase kinase 2 [Source:MGI Symbol;Acc:MGI:1346883]
10. Endod1 ENSMUSG00000037419 556 0.878 - 0.878 - - - - endonuclease domain containing 1 [Source:MGI Symbol;Acc:MGI:1919196]
11. Wisp1 ENSMUSG00000005124 3417 0.878 - 0.878 - - - - WNT1 inducible signaling pathway protein 1 [Source:MGI Symbol;Acc:MGI:1197008]
12. Mob1b ENSMUSG00000006262 1061 0.875 - 0.875 - - - - MOB kinase activator 1B [Source:MGI Symbol;Acc:MGI:1915723]
13. Hps3 ENSMUSG00000027615 596 0.874 - 0.874 - - - - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:MGI Symbol;Acc:MGI:2153839]
14. Nras ENSMUSG00000027852 15203 0.872 - 0.872 - - - - neuroblastoma ras oncogene [Source:MGI Symbol;Acc:MGI:97376]
15. Rarg ENSMUSG00000001288 1281 0.872 - 0.872 - - - - retinoic acid receptor, gamma [Source:MGI Symbol;Acc:MGI:97858]
16. Scpep1 ENSMUSG00000000278 1675 0.871 - 0.871 - - - - serine carboxypeptidase 1 [Source:MGI Symbol;Acc:MGI:1921867]
17. Slc4a2 ENSMUSG00000028962 1312 0.87 - 0.870 - - - - solute carrier family 4 (anion exchanger), member 2 [Source:MGI Symbol;Acc:MGI:109351]
18. Cdc42ep5 ENSMUSG00000063838 592 0.867 - 0.867 - - - - CDC42 effector protein (Rho GTPase binding) 5 [Source:MGI Symbol;Acc:MGI:1929745]
19. Rpl17-ps4 ENSMUSG00000084345 1689 0.867 - 0.867 - - - - ribosomal protein L17, pseudogene 4 [Source:MGI Symbol;Acc:MGI:3651043]
20. Gm26764 ENSMUSG00000097667 599 0.866 - 0.866 - - - - predicted gene, 26764 [Source:MGI Symbol;Acc:MGI:5477258]
21. Thbs1 ENSMUSG00000040152 1713 0.865 - 0.865 - - - - thrombospondin 1 [Source:MGI Symbol;Acc:MGI:98737]
22. BC030867 ENSMUSG00000034773 1105 0.862 - 0.862 - - - - cDNA sequence BC030867 [Source:MGI Symbol;Acc:MGI:2387601]
23. E130308A19Rik ENSMUSG00000045071 1676 0.861 - 0.861 - - - - RIKEN cDNA E130308A19 gene [Source:MGI Symbol;Acc:MGI:2442164]
24. Prkaa1 ENSMUSG00000050697 591 0.859 - 0.859 - - - - protein kinase, AMP-activated, alpha 1 catalytic subunit [Source:MGI Symbol;Acc:MGI:2145955]
25. Itpkb ENSMUSG00000038855 1257 0.859 - 0.859 - - - - inositol 1,4,5-trisphosphate 3-kinase B [Source:MGI Symbol;Acc:MGI:109235]
26. Wipi1 ENSMUSG00000041895 3789 0.858 - 0.858 - - - - WD repeat domain, phosphoinositide interacting 1 [Source:MGI Symbol;Acc:MGI:1261864]
27. Efnb1 ENSMUSG00000031217 2777 0.858 - 0.858 - - - - ephrin B1 [Source:MGI Symbol;Acc:MGI:102708]
28. Cyb5r1 ENSMUSG00000026456 988 0.857 - 0.857 - - - - cytochrome b5 reductase 1 [Source:MGI Symbol;Acc:MGI:1919267]
29. Srd5a3 ENSMUSG00000029233 1029 0.854 - 0.854 - - - - steroid 5 alpha-reductase 3 [Source:MGI Symbol;Acc:MGI:1930252]
30. Ptpru ENSMUSG00000028909 644 0.853 - 0.853 - - - - protein tyrosine phosphatase, receptor type, U [Source:MGI Symbol;Acc:MGI:1321151]
31. 5830417I10Rik ENSMUSG00000078684 1748 0.852 - 0.852 - - - - RIKEN cDNA 5830417I10 gene [Source:MGI Symbol;Acc:MGI:1923272]
32. Zfp937 ENSMUSG00000060336 300 0.852 - 0.852 - - - - zinc finger protein 937 [Source:MGI Symbol;Acc:MGI:3644476]
33. Vmac ENSMUSG00000054723 731 0.851 - 0.851 - - - - vimentin-type intermediate filament associated coiled-coil protein [Source:MGI Symbol;Acc:MGI:2146912]
34. Tmem40 ENSMUSG00000059900 110 0.851 - 0.851 - - - - transmembrane protein 40 [Source:MGI Symbol;Acc:MGI:2137870]
35. Zfp456 ENSMUSG00000078995 125 0.851 - 0.851 - - - - zinc finger protein 456 [Source:MGI Symbol;Acc:MGI:3040694]
36. Espn ENSMUSG00000028943 238 0.851 - 0.851 - - - - espin [Source:MGI Symbol;Acc:MGI:1861630]
37. Rgs18 ENSMUSG00000026357 156 0.851 - 0.851 - - - - regulator of G-protein signaling 18 [Source:MGI Symbol;Acc:MGI:1927498]
38. Nxt2 ENSMUSG00000042271 400 0.851 - 0.851 - - - - nuclear transport factor 2-like export factor 2 [Source:MGI Symbol;Acc:MGI:2147914]
39. Rad9b ENSMUSG00000038569 151 0.851 - 0.851 - - - - RAD9 checkpoint clamp component B [Source:MGI Symbol;Acc:MGI:2385231]
40. Gnb1l ENSMUSG00000000884 358 0.85 - 0.850 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 1-like [Source:MGI Symbol;Acc:MGI:1338057]
41. Hiatl1 Hiatl1 766 0.85 - 0.850 - - - -
42. 3830406C13Rik ENSMUSG00000033111 586 0.85 - 0.850 - - - - RIKEN cDNA 3830406C13 gene [Source:MGI Symbol;Acc:MGI:1917937]
43. Haus1 ENSMUSG00000041840, ENSMUSG00000115884 877 0.85 - 0.850 - - - - HAUS augmin-like complex, subunit 1 [Source:MGI Symbol;Acc:MGI:2385076]
44. H2-Q4 ENSMUSG00000035929 157 0.85 - 0.850 - - - - histocompatibility 2, Q region locus 4 [Source:MGI Symbol;Acc:MGI:95933]
45. Mtfp1 ENSMUSG00000004748 496 0.85 - 0.850 - - - - mitochondrial fission process 1 [Source:MGI Symbol;Acc:MGI:1916686]
46. Gm26809 ENSMUSG00000097815 449 0.849 - 0.849 - - - - predicted gene, 26809 [Source:MGI Symbol;Acc:MGI:5477303]
47. Trp53inp1 ENSMUSG00000028211 686 0.849 - 0.849 - - - - transformation related protein 53 inducible nuclear protein 1 [Source:MGI Symbol;Acc:MGI:1926609]
48. Zc3h7a ENSMUSG00000037965 1775 0.849 - 0.849 - - - - zinc finger CCCH type containing 7 A [Source:MGI Symbol;Acc:MGI:2445044]
49. Coch ENSMUSG00000020953 154 0.849 - 0.849 - - - - cochlin [Source:MGI Symbol;Acc:MGI:1278313]
50. Gm13342 ENSMUSG00000082516 112 0.849 - 0.849 - - - - predicted gene 13342 [Source:MGI Symbol;Acc:MGI:3650441]
51. Psma6 ENSMUSG00000021024 3072 0.849 - 0.849 - - - - proteasome (prosome, macropain) subunit, alpha type 6 [Source:MGI Symbol;Acc:MGI:1347006]
52. Tfip11 ENSMUSG00000029345 399 0.849 - 0.849 - - - - tuftelin interacting protein 11 [Source:MGI Symbol;Acc:MGI:1930075]
53. Cnot8 ENSMUSG00000020515 2299 0.849 - 0.849 - - - - CCR4-NOT transcription complex, subunit 8 [Source:MGI Symbol;Acc:MGI:1916375]
54. Trim12a ENSMUSG00000066258 403 0.849 - 0.849 - - - - tripartite motif-containing 12A [Source:MGI Symbol;Acc:MGI:1923931]
55. Vav3 ENSMUSG00000033721 527 0.848 - 0.848 - - - - vav 3 oncogene [Source:MGI Symbol;Acc:MGI:1888518]
56. Rer1 ENSMUSG00000029048 3007 0.848 - 0.848 - - - - retention in endoplasmic reticulum sorting receptor 1 [Source:MGI Symbol;Acc:MGI:1915080]
57. Slc20a2 ENSMUSG00000037656 778 0.848 - 0.848 - - - - solute carrier family 20, member 2 [Source:MGI Symbol;Acc:MGI:97851]
58. Gemin2 ENSMUSG00000060121 858 0.848 - 0.848 - - - - gem nuclear organelle associated protein 2 [Source:MGI Symbol;Acc:MGI:1913853]
59. Gchfr ENSMUSG00000046814 266 0.848 - 0.848 - - - - GTP cyclohydrolase I feedback regulator [Source:MGI Symbol;Acc:MGI:2443977]
60. Tpgs1 ENSMUSG00000020308 948 0.848 - 0.848 - - - - tubulin polyglutamylase complex subunit 1 [Source:MGI Symbol;Acc:MGI:106618]
61. Pde4d ENSMUSG00000021699 821 0.848 - 0.848 - - - - phosphodiesterase 4D, cAMP specific [Source:MGI Symbol;Acc:MGI:99555]
62. Ssx2ip ENSMUSG00000036825 1609 0.848 - 0.848 - - - - synovial sarcoma, X 2 interacting protein [Source:MGI Symbol;Acc:MGI:2139150]
63. Mccc1 ENSMUSG00000027709 688 0.847 - 0.847 - - - - methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) [Source:MGI Symbol;Acc:MGI:1919289]
64. Gm16378 ENSMUSG00000095762 683 0.847 - 0.847 - - - - predicted gene 16378 [Source:MGI Symbol;Acc:MGI:3646886]
65. Arl4c ENSMUSG00000049866 1929 0.847 - 0.847 - - - - ADP-ribosylation factor-like 4C [Source:MGI Symbol;Acc:MGI:2445172]
66. Cnih4 ENSMUSG00000062169 2354 0.847 - 0.847 - - - - cornichon family AMPA receptor auxiliary protein 4 [Source:MGI Symbol;Acc:MGI:1925828]
67. Card10 ENSMUSG00000033170 832 0.846 - 0.846 - - - - caspase recruitment domain family, member 10 [Source:MGI Symbol;Acc:MGI:2146012]
68. Gpc4 ENSMUSG00000031119 424 0.845 - 0.845 - - - - glypican 4 [Source:MGI Symbol;Acc:MGI:104902]
69. Rnaseh2a ENSMUSG00000052926 1911 0.845 - 0.845 - - - - ribonuclease H2, large subunit [Source:MGI Symbol;Acc:MGI:1916974]
70. Rpl35a ENSMUSG00000060636 411 0.845 - 0.845 - - - - ribosomal protein L35A [Source:MGI Symbol;Acc:MGI:1928894]
71. Ddx28 ENSMUSG00000045538 608 0.845 - 0.845 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 [Source:MGI Symbol;Acc:MGI:1919236]
72. Gata4 ENSMUSG00000021944 1346 0.845 - 0.845 - - - - GATA binding protein 4 [Source:MGI Symbol;Acc:MGI:95664]
73. Zfp516 ENSMUSG00000058881 4181 0.845 - 0.845 - - - - zinc finger protein 516 [Source:MGI Symbol;Acc:MGI:2443957]
74. Sema4g ENSMUSG00000025207 494 0.845 - 0.845 - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G [Source:MGI Symbol;Acc:MGI:1347047]
75. Mdfic ENSMUSG00000041390 812 0.845 - 0.845 - - - - MyoD family inhibitor domain containing [Source:MGI Symbol;Acc:MGI:104611]
76. 1700093K21Rik ENSMUSG00000020286 497 0.845 - 0.845 - - - - RIKEN cDNA 1700093K21 gene [Source:MGI Symbol;Acc:MGI:1914608]
77. Cradd ENSMUSG00000045867 347 0.844 - 0.844 - - - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:MGI Symbol;Acc:MGI:1336168]
78. Cyp2j6 ENSMUSG00000052914 325 0.844 - 0.844 - - - - cytochrome P450, family 2, subfamily j, polypeptide 6 [Source:MGI Symbol;Acc:MGI:1270148]
79. Golga3 ENSMUSG00000029502 800 0.844 - 0.844 - - - - golgi autoantigen, golgin subfamily a, 3 [Source:MGI Symbol;Acc:MGI:96958]
80. Sirt3 ENSMUSG00000025486 327 0.843 - 0.843 - - - - sirtuin 3 [Source:MGI Symbol;Acc:MGI:1927665]
81. Nsmce2 ENSMUSG00000059586 2346 0.843 - 0.843 - - - - NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase [Source:MGI Symbol;Acc:MGI:1915751]
82. Ccnd3 ENSMUSG00000034165 817 0.843 - 0.843 - - - - cyclin D3 [Source:MGI Symbol;Acc:MGI:88315]
83. Tead3 ENSMUSG00000002249 2422 0.843 - 0.843 - - - - TEA domain family member 3 [Source:MGI Symbol;Acc:MGI:109241]
84. Acsf3 ENSMUSG00000015016 692 0.842 - 0.842 - - - - acyl-CoA synthetase family member 3 [Source:MGI Symbol;Acc:MGI:2182591]
85. Rnf31 ENSMUSG00000047098 530 0.842 - 0.842 - - - - ring finger protein 31 [Source:MGI Symbol;Acc:MGI:1934704]
86. Sec23a ENSMUSG00000020986 2929 0.841 - 0.841 - - - - SEC23 homolog A, COPII coat complex component [Source:MGI Symbol;Acc:MGI:1349635]
87. Gltscr1l 626 0.841 - 0.841 - - - - GLTSCR1-like, transcript variant X8
88. Rassf3 ENSMUSG00000025795 880 0.841 - 0.841 - - - - Ras association (RalGDS/AF-6) domain family member 3 [Source:MGI Symbol;Acc:MGI:2179722]
89. Gnb2 ENSMUSG00000029713 2747 0.841 - 0.841 - - - - guanine nucleotide binding protein (G protein), beta 2 [Source:MGI Symbol;Acc:MGI:95784]
90. Atp2b1 ENSMUSG00000019943 4466 0.841 - 0.841 - - - - ATPase, Ca++ transporting, plasma membrane 1 [Source:MGI Symbol;Acc:MGI:104653]
91. Ranbp6 ENSMUSG00000074909 552 0.841 - 0.841 - - - - RAN binding protein 6 [Source:MGI Symbol;Acc:MGI:2683212]
92. Scarf2 ENSMUSG00000012017 2585 0.84 0.840 - - - - - scavenger receptor class F, member 2 [Source:MGI Symbol;Acc:MGI:1858430]
93. Hibch ENSMUSG00000041426 755 0.839 - 0.839 - - - - 3-hydroxyisobutyryl-Coenzyme A hydrolase [Source:MGI Symbol;Acc:MGI:1923792]
94. Peo1 667 0.839 - 0.839 - - - - progressive external ophthalmoplegia 1 (human), transcript variant X1
95. Med18 ENSMUSG00000066042 841 0.838 - 0.838 - - - - mediator complex subunit 18 [Source:MGI Symbol;Acc:MGI:1914469]
96. Inpp4a ENSMUSG00000026113 738 0.838 - 0.838 - - - - inositol polyphosphate-4-phosphatase, type I [Source:MGI Symbol;Acc:MGI:1931123]
97. Txndc15 ENSMUSG00000021497 1081 0.838 - 0.838 - - - - thioredoxin domain containing 15 [Source:MGI Symbol;Acc:MGI:1916922]
98. Tyw5 ENSMUSG00000048495 721 0.837 - 0.837 - - - - tRNA-yW synthesizing protein 5 [Source:MGI Symbol;Acc:MGI:1915986]
99. Trmt1 ENSMUSG00000001909 1649 0.837 - 0.837 - - - - tRNA methyltransferase 1 [Source:MGI Symbol;Acc:MGI:1289155]
100. Ube2h ENSMUSG00000039159 3290 0.836 - 0.836 - - - - ubiquitin-conjugating enzyme E2H [Source:MGI Symbol;Acc:MGI:104632]

There are 252 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA