Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Cd44

Gene Name Gene ID Reads Annotation
Cd44 ENSMUSG00000005087 531 CD44 antigen [Source:MGI Symbol;Acc:MGI:88338]







Genes with expression patterns similar to Cd44

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Cd44 ENSMUSG00000005087 531 6 1.000 1.000 1.000 1.000 1.000 1.000 CD44 antigen [Source:MGI Symbol;Acc:MGI:88338]
2. Kif13b ENSMUSG00000060012 56 0.844 - 0.844 - - - - kinesin family member 13B [Source:MGI Symbol;Acc:MGI:1098265]
3. Rassf10 ENSMUSG00000098132 107 0.842 - 0.842 - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10 [Source:MGI Symbol;Acc:MGI:1925998]
4. Gm16365 ENSMUSG00000086915 59 0.839 - 0.839 - - - - predicted gene 16365 [Source:MGI Symbol;Acc:MGI:3840143]
5. Gm13151 Gm13151 9 0.833 - 0.833 - - - -
6. Gm14261 ENSMUSG00000085322 26 0.833 - 0.833 - - - - predicted gene 14261 [Source:MGI Symbol;Acc:MGI:3649583]
7. Adamtsl5 ENSMUSG00000043822 31 0.833 - 0.833 - - - - ADAMTS-like 5 [Source:MGI Symbol;Acc:MGI:1913798]
8. Gm10557 ENSMUSG00000073647 15 0.833 - 0.833 - - - - predicted gene 10557 [Source:MGI Symbol;Acc:MGI:3708638]
9. Pkn1 ENSMUSG00000057672 59 0.833 - 0.833 - - - - protein kinase N1 [Source:MGI Symbol;Acc:MGI:108022]
10. Dnase1l3 ENSMUSG00000025279 16 0.833 - 0.833 - - - - deoxyribonuclease 1-like 3 [Source:MGI Symbol;Acc:MGI:1314633]
11. Fam129a ENSMUSG00000026483 115 0.833 - 0.833 - - - - family with sequence similarity 129, member A [Source:MGI Symbol;Acc:MGI:2137237]
12. M5C1000I18Rik ENSMUSG00000055125 33 0.832 - 0.832 - - - - RIKEN cDNA M5C1000I18 gene [Source:MGI Symbol;Acc:MGI:3642038]
13. Myh14 ENSMUSG00000030739 30 0.829 - 0.829 - - - - myosin, heavy polypeptide 14 [Source:MGI Symbol;Acc:MGI:1919210]
14. Gm22613 ENSMUSG00000084628 31 0.829 - 0.829 - - - - predicted gene, 22613 [Source:MGI Symbol;Acc:MGI:5452390]
15. 1600029O15Rik ENSMUSG00000057818 30 0.829 - 0.829 - - - - RIKEN cDNA 1600029O15 gene [Source:MGI Symbol;Acc:MGI:3045362]
16. Rbl2 ENSMUSG00000031666 25 0.828 - 0.828 - - - - RB transcriptional corepressor like 2 [Source:MGI Symbol;Acc:MGI:105085]
17. n-R5s31 ENSMUSG00000077350 17 0.828 - 0.828 - - - - nuclear encoded rRNA 5S 31 [Source:MGI Symbol;Acc:MGI:4421876]
18. Ankrd13d ENSMUSG00000005986 96 0.827 - 0.827 - - - - ankyrin repeat domain 13 family, member D [Source:MGI Symbol;Acc:MGI:1915673]
19. Pyroxd2 ENSMUSG00000060224 46 0.827 - 0.827 - - - - pyridine nucleotide-disulphide oxidoreductase domain 2 [Source:MGI Symbol;Acc:MGI:1921830]
20. Cyb5d2 ENSMUSG00000057778 119 0.826 - 0.826 - - - - cytochrome b5 domain containing 2 [Source:MGI Symbol;Acc:MGI:2684848]
21. Alpk3 ENSMUSG00000038763 71 0.826 - 0.826 - - - - alpha-kinase 3 [Source:MGI Symbol;Acc:MGI:2151224]
22. Steap3 ENSMUSG00000026389 20 0.824 - 0.824 - - - - STEAP family member 3 [Source:MGI Symbol;Acc:MGI:1915678]
23. Gm26826 ENSMUSG00000097635 33 0.823 - 0.823 - - - - predicted gene, 26826 [Source:MGI Symbol;Acc:MGI:5477320]
24. Gm2a ENSMUSG00000000594 385 0.823 - 0.823 - - - - GM2 ganglioside activator protein [Source:MGI Symbol;Acc:MGI:95762]
25. Gm10040 ENSMUSG00000058360 476 0.822 - 0.822 - - - - predicted gene 10040 [Source:MGI Symbol;Acc:MGI:3708676]
26. Tulp1 ENSMUSG00000037446 33 0.813 - 0.813 - - - - tubby like protein 1 [Source:MGI Symbol;Acc:MGI:109571]
27. Abcg1 ENSMUSG00000024030 101 0.812 - 0.812 - - - - ATP binding cassette subfamily G member 1 [Source:MGI Symbol;Acc:MGI:107704]
28. Slc35e1 ENSMUSG00000019731 1126 0.811 - 0.811 - - - - solute carrier family 35, member E1 [Source:MGI Symbol;Acc:MGI:2142403]
29. Csf3r ENSMUSG00000028859 278 0.811 - 0.811 - - - - colony stimulating factor 3 receptor (granulocyte) [Source:MGI Symbol;Acc:MGI:1339755]
30. Cpne7 ENSMUSG00000034796 49 0.806 - 0.806 - - - - copine VII [Source:MGI Symbol;Acc:MGI:2142747]
31. B3gnt3 ENSMUSG00000031803 47 0.805 - 0.805 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 [Source:MGI Symbol;Acc:MGI:2152535]
32. Bspry ENSMUSG00000028392 37 0.804 - 0.804 - - - - B-box and SPRY domain containing [Source:MGI Symbol;Acc:MGI:2177191]
33. Mettl25 ENSMUSG00000036009 217 0.803 - 0.803 - - - - methyltransferase like 25 [Source:MGI Symbol;Acc:MGI:3041259]
34. Lnpep ENSMUSG00000023845 48 0.795 - 0.795 - - - - leucyl/cystinyl aminopeptidase [Source:MGI Symbol;Acc:MGI:2387123]
35. Vps13c ENSMUSG00000035284 230 0.794 - 0.794 - - - - vacuolar protein sorting 13C [Source:MGI Symbol;Acc:MGI:2444207]
36. Txlnb ENSMUSG00000039891 77 0.794 - 0.794 - - - - taxilin beta [Source:MGI Symbol;Acc:MGI:2671945]
37. Ppl ENSMUSG00000039457 107 0.792 - 0.792 - - - - periplakin [Source:MGI Symbol;Acc:MGI:1194898]
38. Gm4425 ENSMUSG00000093846 106 0.792 - 0.792 - - - - predicted gene 4425 [Source:MGI Symbol;Acc:MGI:3809660]
39. Tbx4 ENSMUSG00000000094 350 0.789 - 0.789 - - - - T-box 4 [Source:MGI Symbol;Acc:MGI:102556]
40. Fam221a ENSMUSG00000047115 190 0.788 - 0.788 - - - - family with sequence similarity 221, member A [Source:MGI Symbol;Acc:MGI:2442161]
41. Trim21 ENSMUSG00000030966 294 0.787 - 0.787 - - - - tripartite motif-containing 21 [Source:MGI Symbol;Acc:MGI:106657]
42. 6330408A02Rik 210 0.786 - 0.786 - - - - RIKEN cDNA 6330408A02 gene
43. Gm19357 Gm19357 51 0.785 - 0.785 - - - -
44. Ankrd55 ENSMUSG00000049985 18 0.782 - 0.782 - - - - ankyrin repeat domain 55 [Source:MGI Symbol;Acc:MGI:1924568]
45. Gm13429 ENSMUSG00000085141 36 0.775 - 0.775 - - - - predicted gene 13429 [Source:MGI Symbol;Acc:MGI:3651652]
46. Ube2e1 ENSMUSG00000021774 962 0.773 - 0.773 - - - - ubiquitin-conjugating enzyme E2E 1 [Source:MGI Symbol;Acc:MGI:107411]
47. Ppp1r16b ENSMUSG00000037754 221 0.769 - 0.769 - - - - protein phosphatase 1, regulatory subunit 16B [Source:MGI Symbol;Acc:MGI:2151841]
48. Pth1r ENSMUSG00000032492 1129 0.769 - 0.769 - - - - parathyroid hormone 1 receptor [Source:MGI Symbol;Acc:MGI:97801]
49. Ppp1r12c ENSMUSG00000019254 701 0.769 - 0.769 - - - - protein phosphatase 1, regulatory subunit 12C [Source:MGI Symbol;Acc:MGI:1924258]
50. Micall2 ENSMUSG00000036718 130 0.768 - 0.768 - - - - MICAL-like 2 [Source:MGI Symbol;Acc:MGI:2444818]
51. Nubp2 ENSMUSG00000039183 1097 0.766 - 0.766 - - - - nucleotide binding protein 2 [Source:MGI Symbol;Acc:MGI:1347072]
52. Gm13077 ENSMUSG00000081544 45 0.764 - 0.764 - - - - predicted gene 13077 [Source:MGI Symbol;Acc:MGI:3649703]
53. Fam35a 250 0.764 - 0.764 - - - - family with sequence similarity 35, member A, transcript variant X8
54. Gpr156 ENSMUSG00000046961 57 0.764 - 0.764 - - - - G protein-coupled receptor 156 [Source:MGI Symbol;Acc:MGI:2653880]
55. Fmod ENSMUSG00000041559 161 0.763 - 0.763 - - - - fibromodulin [Source:MGI Symbol;Acc:MGI:1328364]
56. Gm9776 ENSMUSG00000042857 174 0.761 - 0.761 - - - - predicted gene 9776 [Source:MGI Symbol;Acc:MGI:3641792]
57. Grm4 ENSMUSG00000063239 430 0.761 - 0.761 - - - - glutamate receptor, metabotropic 4 [Source:MGI Symbol;Acc:MGI:1351341]
58. 4930563E22Rik ENSMUSG00000053574 111 0.761 - 0.761 - - - - RIKEN cDNA 4930563E22 gene [Source:MGI Symbol;Acc:MGI:1922554]
59. Slc2a10 ENSMUSG00000027661 105 0.759 - 0.759 - - - - solute carrier family 2 (facilitated glucose transporter), member 10 [Source:MGI Symbol;Acc:MGI:2156687]
60. Neat1 ENSMUSG00000092274 205 0.758 - 0.758 - - - - nuclear paraspeckle assembly transcript 1 (non-protein coding) [Source:MGI Symbol;Acc:MGI:1914211]
61. Cntln ENSMUSG00000038070 976 0.757 - 0.757 - - - - centlein, centrosomal protein [Source:MGI Symbol;Acc:MGI:2443104]
62. Trdn ENSMUSG00000019787 30 0.756 - 0.756 - - - - triadin [Source:MGI Symbol;Acc:MGI:1924007]
63. Nabp1 ENSMUSG00000026107 279 0.754 - 0.754 - - - - nucleic acid binding protein 1 [Source:MGI Symbol;Acc:MGI:1923258]
64. Vstm2b ENSMUSG00000039257 64 0.753 0.753 - - - - - V-set and transmembrane domain containing 2B [Source:MGI Symbol;Acc:MGI:1914525]
65. Rab23 ENSMUSG00000004768 822 0.748 - 0.748 - - - - RAB23, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:99833]
66. Fbxl4 ENSMUSG00000040410 157 0.747 - 0.747 - - - - F-box and leucine-rich repeat protein 4 [Source:MGI Symbol;Acc:MGI:2140367]
67. Zfp84 ENSMUSG00000046185 136 0.745 - 0.745 - - - - zinc finger protein 84 [Source:MGI Symbol;Acc:MGI:107780]
68. Syt9 ENSMUSG00000062542 127 0.745 - 0.745 - - - - synaptotagmin IX [Source:MGI Symbol;Acc:MGI:1926373]
69. Nxpe2 ENSMUSG00000032028 93 0.745 - - - 0.745 - - neurexophilin and PC-esterase domain family, member 2 [Source:MGI Symbol;Acc:MGI:1925502]
70. Dhdds ENSMUSG00000012117 1081 0.744 - 0.744 - - - - dehydrodolichyl diphosphate synthase [Source:MGI Symbol;Acc:MGI:1914672]
71. Ppm1h ENSMUSG00000034613 200 0.744 - 0.744 - - - - protein phosphatase 1H (PP2C domain containing) [Source:MGI Symbol;Acc:MGI:2442087]
72. Myo1c ENSMUSG00000017774 979 0.744 - 0.744 - - - - myosin IC [Source:MGI Symbol;Acc:MGI:106612]
73. Irf1 ENSMUSG00000018899 239 0.744 - 0.744 - - - - interferon regulatory factor 1 [Source:MGI Symbol;Acc:MGI:96590]
74. Xlr4c ENSMUSG00000031362 30 0.742 - 0.742 - - - - X-linked lymphocyte-regulated 4C [Source:MGI Symbol;Acc:MGI:3574099]
75. Slc10a7 ENSMUSG00000031684 417 0.741 - 0.741 - - - - solute carrier family 10 (sodium/bile acid cotransporter family), member 7 [Source:MGI Symbol;Acc:MGI:1924025]
76. Fam19a1 ENSMUSG00000059187 41 0.74 - 0.740 - - - - family with sequence similarity 19, member A1 [Source:MGI Symbol;Acc:MGI:2443695]
77. Tmc6 ENSMUSG00000025572 215 0.738 - 0.738 - - - - transmembrane channel-like gene family 6 [Source:MGI Symbol;Acc:MGI:1098686]
78. Snord92 ENSMUSG00000093289 108 0.737 - 0.737 - - - - small nucleolar RNA, C/D box 92 [Source:MGI Symbol;Acc:MGI:3819565]
79. Gm6055 ENSMUSG00000062081 62 0.736 - 0.736 - - - - predicted gene 6055 [Source:MGI Symbol;Acc:MGI:3648620]
80. Rps6 ENSMUSG00000028495 132 0.735 - 0.735 - - - - ribosomal protein S6 [Source:MGI Symbol;Acc:MGI:98159]
81. Gm27012 Gm27012 164 0.734 - 0.734 - - - -
82. Efemp1 ENSMUSG00000020467 735 0.733 - 0.733 - - - - epidermal growth factor-containing fibulin-like extracellular matrix protein 1 [Source:MGI Symbol;Acc:MGI:1339998]
83. Gm26507 ENSMUSG00000097618 43 0.733 0.733 - - - - - predicted gene, 26507 [Source:MGI Symbol;Acc:MGI:5477001]
84. Elovl4 ENSMUSG00000032262 290 0.729 - 0.729 - - - - elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4 [Source:MGI Symbol;Acc:MGI:1933331]
85. Mettl15 ENSMUSG00000057234 379 0.729 - 0.729 - - - - methyltransferase like 15 [Source:MGI Symbol;Acc:MGI:1924144]
86. 9430037G07Rik ENSMUSG00000097073 107 0.727 - 0.727 - - - - RIKEN cDNA 9430037G07 gene [Source:MGI Symbol;Acc:MGI:2444544]
87. Medag ENSMUSG00000029659 58 0.726 0.726 - - - - - mesenteric estrogen dependent adipogenesis [Source:MGI Symbol;Acc:MGI:1917967]
88. Gm12732 ENSMUSG00000082646 80 0.726 - 0.726 - - - - predicted gene 12732 [Source:MGI Symbol;Acc:MGI:3650211]
89. A730017L22Rik ENSMUSG00000085566 146 0.725 - 0.725 - - - - RIKEN cDNA A730017L22 gene [Source:MGI Symbol;Acc:MGI:3584452]
90. Gm10000 ENSMUSG00000114826 31 0.725 - 0.725 - - - - predicted gene 10000 [Source:MGI Symbol;Acc:MGI:3641968]
91. Pdlim5 ENSMUSG00000028273 1512 0.72 0.720 - - - - - PDZ and LIM domain 5 [Source:MGI Symbol;Acc:MGI:1927489]
92. Slc25a45 ENSMUSG00000024818 245 0.719 0.719 - - - - - solute carrier family 25, member 45 [Source:MGI Symbol;Acc:MGI:2147731]
93. Rnf130 ENSMUSG00000020376 530 0.719 - 0.719 - - - - ring finger protein 130 [Source:MGI Symbol;Acc:MGI:1891717]
94. Mb21d1 ENSMUSG00000032344 125 0.717 - 0.717 - - - - Mab-21 domain containing 1 [Source:MGI Symbol;Acc:MGI:2442261]
95. Nphp3 ENSMUSG00000032558 395 0.717 - 0.717 - - - - nephronophthisis 3 (adolescent) [Source:MGI Symbol;Acc:MGI:1921275]
96. Fbln5 ENSMUSG00000021186 242 0.717 - - 0.717 - - - fibulin 5 [Source:MGI Symbol;Acc:MGI:1346091]
97. Gm6472 ENSMUSG00000095597 22 0.715 0.715 - - - - - predicted pseudogene 6472 [Source:MGI Symbol;Acc:MGI:3648396]
98. Fahd2a ENSMUSG00000027371 222 0.714 - 0.714 - - - - fumarylacetoacetate hydrolase domain containing 2A [Source:MGI Symbol;Acc:MGI:1915376]
99. Selm 538 0.714 - 0.714 - - - - selenoprotein M
100. Ccdc68 ENSMUSG00000038903 129 0.714 0.714 - - - - - coiled-coil domain containing 68 [Source:MGI Symbol;Acc:MGI:3612676]

There are 23 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA