Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Bdnf

Gene Name Gene ID Reads Annotation
Bdnf ENSMUSG00000048482 354 brain derived neurotrophic factor [Source:MGI Symbol;Acc:MGI:88145]







Genes with expression patterns similar to Bdnf

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Bdnf ENSMUSG00000048482 354 6 1.000 1.000 1.000 1.000 1.000 1.000 brain derived neurotrophic factor [Source:MGI Symbol;Acc:MGI:88145]
2. Gm22620 ENSMUSG00000064634 44 1.679 - - 0.807 - - 0.872 predicted gene, 22620 [Source:MGI Symbol;Acc:MGI:5452397]
3. Mrpl41 ENSMUSG00000036850 2477 1.584 - - 0.804 - - 0.780 mitochondrial ribosomal protein L41 [Source:MGI Symbol;Acc:MGI:1333816]
4. Cdk6 ENSMUSG00000040274 355 1.544 - - 0.812 - - 0.732 cyclin-dependent kinase 6 [Source:MGI Symbol;Acc:MGI:1277162]
5. Gm26814 ENSMUSG00000097385 223 0.921 - - - - - 0.921 predicted gene, 26814 [Source:MGI Symbol;Acc:MGI:5477308]
6. Tek ENSMUSG00000006386 636 0.915 - - - - - 0.915 TEK receptor tyrosine kinase [Source:MGI Symbol;Acc:MGI:98664]
7. Zufsp 302 0.912 - - - - - 0.912 zinc finger with UFM1-specific peptidase domain, transcript variant X5
8. Zfp398 ENSMUSG00000062519 315 0.907 - - - - - 0.907 zinc finger protein 398 [Source:MGI Symbol;Acc:MGI:1917856]
9. BC002059 ENSMUSG00000060149 572 0.907 - - - - - 0.907 cDNA sequence BC002059 [Source:MGI Symbol;Acc:MGI:2384864]
10. Tfb2m ENSMUSG00000026492 253 0.897 - - 0.897 - - - transcription factor B2, mitochondrial [Source:MGI Symbol;Acc:MGI:107937]
11. Akr1b10 ENSMUSG00000061758 586 0.895 - - 0.895 - - - aldo-keto reductase family 1, member B10 (aldose reductase) [Source:MGI Symbol;Acc:MGI:1915111]
12. Pggt1b ENSMUSG00000024477 511 0.889 - - - - - 0.889 protein geranylgeranyltransferase type I, beta subunit [Source:MGI Symbol;Acc:MGI:1917514]
13. Cep89 ENSMUSG00000023072 738 0.882 - - - - - 0.882 centrosomal protein 89 [Source:MGI Symbol;Acc:MGI:1919390]
14. Slfn2 ENSMUSG00000072620, ENSMUSG00000115954, ENSMUSG00000115991, ENSMUSG00000116022 38 0.878 - - - - - 0.878 schlafen 2 [Source:NCBI gene;Acc:20556]
15. 1700029F12Rik ENSMUSG00000052075 13 0.876 - - - - - 0.876 RIKEN cDNA 1700029F12 gene [Source:MGI Symbol;Acc:MGI:1913729]
16. Klk13 ENSMUSG00000054046 16 0.876 - - - - - 0.876 kallikrein related-peptidase 13 [Source:MGI Symbol;Acc:MGI:3615275]
17. Gm20760 ENSMUSG00000093919 68 0.872 - - - - - 0.872 predicted gene, 20760 [Source:MGI Symbol;Acc:MGI:5434116]
18. Gm5116 ENSMUSG00000100751 16 0.872 - - - - - 0.872 predicted gene 5116 [Source:MGI Symbol;Acc:MGI:3649164]
19. 1700042O10Rik ENSMUSG00000086391 36 0.871 - - - - - 0.871 RIKEN cDNA 1700042O10 gene [Source:MGI Symbol;Acc:MGI:1920571]
20. Ifitm10 ENSMUSG00000045777 59 0.871 - - - - - 0.871 interferon induced transmembrane protein 10 [Source:MGI Symbol;Acc:MGI:2444776]
21. Arhgap6 ENSMUSG00000031355 260 0.871 - - - - - 0.871 Rho GTPase activating protein 6 [Source:MGI Symbol;Acc:MGI:1196332]
22. Prss53 ENSMUSG00000044139 49 0.869 - - - - - 0.869 protease, serine 53 [Source:MGI Symbol;Acc:MGI:2652890]
23. Coil ENSMUSG00000033983 461 0.864 - - 0.864 - - - coilin [Source:MGI Symbol;Acc:MGI:104842]
24. Ak5 ENSMUSG00000039058 89 0.863 - - - - - 0.863 adenylate kinase 5 [Source:MGI Symbol;Acc:MGI:2677491]
25. Zfp493 ENSMUSG00000090659 91 0.863 - - - - - 0.863 zinc finger protein 493 [Source:MGI Symbol;Acc:MGI:1920208]
26. Lgals9 ENSMUSG00000001123 214 0.863 - - - - - 0.863 lectin, galactose binding, soluble 9 [Source:MGI Symbol;Acc:MGI:109496]
27. Zcchc4 ENSMUSG00000029179 1006 0.862 - - - - - 0.862 zinc finger, CCHC domain containing 4 [Source:MGI Symbol;Acc:MGI:1926046]
28. Angpt2 ENSMUSG00000031465 118 0.861 - - - - - 0.861 angiopoietin 2 [Source:MGI Symbol;Acc:MGI:1202890]
29. Scly ENSMUSG00000026307 372 0.861 - - - - - 0.861 selenocysteine lyase [Source:MGI Symbol;Acc:MGI:1355310]
30. A330048O09Rik ENSMUSG00000097326 31 0.858 - - - - - 0.858 RIKEN cDNA A330048O09 gene [Source:MGI Symbol;Acc:MGI:2443792]
31. Gm15396 ENSMUSG00000109491 112 0.857 - - - - - 0.857 predicted gene 15396 [Source:MGI Symbol;Acc:MGI:3705202]
32. Prtn3 ENSMUSG00000057729 200 0.856 - - - - - 0.856 proteinase 3 [Source:MGI Symbol;Acc:MGI:893580]
33. Ccdc89 ENSMUSG00000044362 82 0.855 - - - - - 0.855 coiled-coil domain containing 89 [Source:MGI Symbol;Acc:MGI:1917304]
34. Lyve1 ENSMUSG00000030787 184 0.854 - - - - - 0.854 lymphatic vessel endothelial hyaluronan receptor 1 [Source:MGI Symbol;Acc:MGI:2136348]
35. Elovl4 ENSMUSG00000032262 290 0.854 - - - - - 0.854 elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4 [Source:MGI Symbol;Acc:MGI:1933331]
36. Kri1 ENSMUSG00000035047 116 0.854 - - - - - 0.854 KRI1 homolog [Source:MGI Symbol;Acc:MGI:2384899]
37. Nfatc1 ENSMUSG00000033016 281 0.852 - - - - - 0.852 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 [Source:MGI Symbol;Acc:MGI:102469]
38. Sox18 ENSMUSG00000046470 111 0.85 - - - - - 0.850 SRY (sex determining region Y)-box 18 [Source:MGI Symbol;Acc:MGI:103559]
39. Gm16292 Gm16292 40 0.849 - - - - - 0.849
40. Entpd1 ENSMUSG00000048120 159 0.849 - - - - - 0.849 ectonucleoside triphosphate diphosphohydrolase 1 [Source:MGI Symbol;Acc:MGI:102805]
41. Gm5566 ENSMUSG00000080002 78 0.843 - - 0.843 - - - predicted pseudogene 5566 [Source:MGI Symbol;Acc:MGI:3648428]
42. Tmf1 ENSMUSG00000030059 432 0.843 - - - - - 0.843 TATA element modulatory factor 1 [Source:MGI Symbol;Acc:MGI:2684999]
43. Rpl27-ps3 ENSMUSG00000073640 99 0.843 - - - - - 0.843 ribosomal protein L27, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3646174]
44. Mylk4 ENSMUSG00000044951 196 0.842 - - 0.842 - - - myosin light chain kinase family, member 4 [Source:MGI Symbol;Acc:MGI:3643758]
45. Trp53i13 ENSMUSG00000044328 168 0.841 - - - - - 0.841 transformation related protein 53 inducible protein 13 [Source:MGI Symbol;Acc:MGI:1915125]
46. Gm6395 ENSMUSG00000091905 164 0.84 - - - - - 0.840 predicted gene 6395 [Source:MGI Symbol;Acc:MGI:3645295]
47. Filip1l ENSMUSG00000043336 937 0.839 - - - - - 0.839 filamin A interacting protein 1-like [Source:MGI Symbol;Acc:MGI:1925999]
48. Gm17530 ENSMUSG00000103731 93 0.837 - - - - - 0.837 predicted gene, 17530 [Source:MGI Symbol;Acc:MGI:4937164]
49. Lig4 ENSMUSG00000049717 564 0.836 - - - - - 0.836 ligase IV, DNA, ATP-dependent [Source:MGI Symbol;Acc:MGI:1335098]
50. Hist1h4f ENSMUSG00000069274 52 0.836 - - - - - 0.836 histone cluster 1, H4f [Source:MGI Symbol;Acc:MGI:2448425]
51. Stk19 ENSMUSG00000061207 621 0.834 - - - - - 0.834 serine/threonine kinase 19 [Source:MGI Symbol;Acc:MGI:1860085]
52. Slc25a45 ENSMUSG00000024818 245 0.834 - - - - - 0.834 solute carrier family 25, member 45 [Source:MGI Symbol;Acc:MGI:2147731]
53. Zc3hav1 ENSMUSG00000029826 107 0.833 - - - - - 0.833 zinc finger CCCH type, antiviral 1 [Source:MGI Symbol;Acc:MGI:1926031]
54. Zfp619 ENSMUSG00000068959 230 0.829 - - - - - 0.829 zinc finger protein 619 [Source:MGI Symbol;Acc:MGI:1917477]
55. Bcap31 ENSMUSG00000002015 6908 0.824 - - - - - 0.824 B cell receptor associated protein 31 [Source:MGI Symbol;Acc:MGI:1350933]
56. Gm12166 ENSMUSG00000069899 88 0.823 - - - - - 0.823 predicted gene 12166 [Source:MGI Symbol;Acc:MGI:3650635]
57. Gm11964 ENSMUSG00000081021 513 0.823 - - - - - 0.823 predicted gene 11964 [Source:MGI Symbol;Acc:MGI:3652241]
58. Cybb ENSMUSG00000015340 95 0.823 - - - - - 0.823 cytochrome b-245, beta polypeptide [Source:MGI Symbol;Acc:MGI:88574]
59. Fbxo8 ENSMUSG00000038206 1079 0.823 - - - - - 0.823 F-box protein 8 [Source:MGI Symbol;Acc:MGI:1354696]
60. Slc35b1 ENSMUSG00000020873 1615 0.82 - - - - - 0.820 solute carrier family 35, member B1 [Source:MGI Symbol;Acc:MGI:1343133]
61. Tcf7 ENSMUSG00000000782 407 0.82 - - - - - 0.820 transcription factor 7, T cell specific [Source:MGI Symbol;Acc:MGI:98507]
62. Ipo7 ENSMUSG00000066232 167 0.819 - - - - - 0.819 importin 7 [Source:MGI Symbol;Acc:MGI:2152414]
63. Cxcl14 ENSMUSG00000021508 581 0.816 - - 0.816 - - - chemokine (C-X-C motif) ligand 14 [Source:MGI Symbol;Acc:MGI:1888514]
64. Nmrk1 ENSMUSG00000037847 809 0.816 - - - - - 0.816 nicotinamide riboside kinase 1 [Source:MGI Symbol;Acc:MGI:2147434]
65. Alkbh8 ENSMUSG00000025899 1212 0.815 - - 0.815 - - - alkB homolog 8, tRNA methyltransferase [Source:MGI Symbol;Acc:MGI:1914917]
66. Nudt6 ENSMUSG00000050174 128 0.815 - - - - - 0.815 nudix (nucleoside diphosphate linked moiety X)-type motif 6 [Source:MGI Symbol;Acc:MGI:2387618]
67. Dmtn ENSMUSG00000022099 423 0.815 - - - - - 0.815 dematin actin binding protein [Source:MGI Symbol;Acc:MGI:99670]
68. Plgrkt ENSMUSG00000016495 650 0.815 - - 0.815 - - - plasminogen receptor, C-terminal lysine transmembrane protein [Source:MGI Symbol;Acc:MGI:1915009]
69. Mmp14 ENSMUSG00000000957 1636 0.815 - - - - - 0.815 matrix metallopeptidase 14 (membrane-inserted) [Source:MGI Symbol;Acc:MGI:101900]
70. E4f1 ENSMUSG00000024137 221 0.812 - - - - - 0.812 E4F transcription factor 1 [Source:MGI Symbol;Acc:MGI:109530]
71. 1700073E17Rik ENSMUSG00000087204 370 0.812 - - - - - 0.812 RIKEN cDNA 1700073E17 gene [Source:MGI Symbol;Acc:MGI:1920734]
72. Sdcbp ENSMUSG00000028249 5756 0.811 - - 0.811 - - - syndecan binding protein [Source:MGI Symbol;Acc:MGI:1337026]
73. Mkks ENSMUSG00000027274 1777 0.811 - - - - - 0.811 McKusick-Kaufman syndrome [Source:MGI Symbol;Acc:MGI:1891836]
74. 3110021A11Rik 194 0.811 - - - - - 0.811 RIKEN cDNA 3110021A11 gene
75. Camk2a ENSMUSG00000024617 134 0.811 - - 0.811 - - - calcium/calmodulin-dependent protein kinase II alpha [Source:MGI Symbol;Acc:MGI:88256]
76. Kcns3 ENSMUSG00000043673 74 0.811 - - - - - 0.811 potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3 [Source:MGI Symbol;Acc:MGI:1098804]
77. Slc16a14 ENSMUSG00000026220 162 0.811 - - 0.811 - - - solute carrier family 16 (monocarboxylic acid transporters), member 14 [Source:MGI Symbol;Acc:MGI:1919031]
78. Pkn2 ENSMUSG00000004591 3449 0.81 - - - - - 0.810 protein kinase N2 [Source:MGI Symbol;Acc:MGI:109211]
79. Kif24 ENSMUSG00000028438 185 0.81 - - - - - 0.810 kinesin family member 24 [Source:MGI Symbol;Acc:MGI:1918345]
80. Ap1g2 ENSMUSG00000040701 241 0.81 - - - - 0.810 - adaptor protein complex AP-1, gamma 2 subunit [Source:MGI Symbol;Acc:MGI:1328307]
81. Fhod1 ENSMUSG00000014778 539 0.81 - - - - - 0.810 formin homology 2 domain containing 1 [Source:MGI Symbol;Acc:MGI:2679008]
82. Acacb ENSMUSG00000042010 73 0.81 - - 0.810 - - - acetyl-Coenzyme A carboxylase beta [Source:MGI Symbol;Acc:MGI:2140940]
83. Tob1 ENSMUSG00000037573 345 0.81 - - 0.810 - - - transducer of ErbB-2.1 [Source:MGI Symbol;Acc:MGI:1349721]
84. Ccne2 ENSMUSG00000028212 419 0.809 - - 0.809 - - - cyclin E2 [Source:MGI Symbol;Acc:MGI:1329034]
85. Gm16183 ENSMUSG00000086067 61 0.809 - - 0.809 - - - predicted gene 16183 [Source:MGI Symbol;Acc:MGI:3802174]
86. B4galt4 ENSMUSG00000022793 973 0.809 - - - - - 0.809 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4 [Source:MGI Symbol;Acc:MGI:1928387]
87. Ccr7 ENSMUSG00000037944 33 0.807 - - - - - 0.807 chemokine (C-C motif) receptor 7 [Source:MGI Symbol;Acc:MGI:103011]
88. Slc23a1 ENSMUSG00000024354 693 0.806 - - - - - 0.806 solute carrier family 23 (nucleobase transporters), member 1 [Source:MGI Symbol;Acc:MGI:1341903]
89. Gm6498 ENSMUSG00000063885 41 0.806 - - 0.806 - - - predicted gene 6498 [Source:MGI Symbol;Acc:MGI:3647773]
90. Skiv2l2 ENSMUSG00000016018 3259 0.806 - - 0.806 - - - superkiller viralicidic activity 2-like 2 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1919448]
91. 4732456N10Rik 4732456N10Rik 44 0.806 - - 0.806 - - -
92. 4930563E22Rik ENSMUSG00000053574 111 0.805 - - 0.805 - - - RIKEN cDNA 4930563E22 gene [Source:MGI Symbol;Acc:MGI:1922554]
93. Gm5403 ENSMUSG00000083250 29 0.805 - - 0.805 - - - predicted gene 5403 [Source:MGI Symbol;Acc:MGI:3644700]
94. Fxyd7 ENSMUSG00000036578 135 0.804 - - - - - 0.804 FXYD domain-containing ion transport regulator 7 [Source:MGI Symbol;Acc:MGI:1889006]
95. Intu ENSMUSG00000060798, ENSMUSG00000116357 224 0.804 - - - - - 0.804 inturned planar cell polarity protein [Source:MGI Symbol;Acc:MGI:2443752]
96. Qpct ENSMUSG00000024084 41 0.804 - - 0.804 - - - glutaminyl-peptide cyclotransferase (glutaminyl cyclase) [Source:MGI Symbol;Acc:MGI:1917786]
97. Pfkfb1 ENSMUSG00000025271 174 0.804 - - - - - 0.804 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 [Source:MGI Symbol;Acc:MGI:107816]
98. Gm26805 ENSMUSG00000097268 14 0.804 - - 0.804 - - - predicted gene, 26805 [Source:MGI Symbol;Acc:MGI:5477299]
99. Irx6 ENSMUSG00000031738 33 0.803 - - 0.803 - - - Iroquois homeobox 6 [Source:MGI Symbol;Acc:MGI:1927642]
100. Wrap53 ENSMUSG00000041346 480 0.802 - - - - - 0.802 WD repeat containing, antisense to Trp53 [Source:MGI Symbol;Acc:MGI:2384933]

There are 223 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA