Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for BC021891

Gene Name Gene ID Reads Annotation
BC021891 15 cDNA sequence BC021891, transcript variant X1







Genes with expression patterns similar to BC021891

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. BC021891 15 6 1.000 1.000 1.000 1.000 1.000 1.000 cDNA sequence BC021891, transcript variant X1
2. 1600029D21Rik 1600029D21Rik 31 1.71 - - 0.710 - - 1.000
3. Gm15302 ENSMUSG00000084377 8 0.977 - - - - - 0.977 predicted gene 15302 [Source:MGI Symbol;Acc:MGI:3705638]
4. Gm9845 ENSMUSG00000050533 6 0.977 - - - - - 0.977 predicted pseudogene 9845 [Source:MGI Symbol;Acc:MGI:3704215]
5. Pah ENSMUSG00000020051 8 0.977 - - - - - 0.977 phenylalanine hydroxylase [Source:MGI Symbol;Acc:MGI:97473]
6. Gm23563 ENSMUSG00000092641 17 0.977 - - - - - 0.977 predicted gene, 23563 [Source:MGI Symbol;Acc:MGI:5453340]
7. Gm25132 ENSMUSG00000064586 7 0.977 - - - - - 0.977 predicted gene, 25132 [Source:MGI Symbol;Acc:MGI:5454909]
8. Six6 ENSMUSG00000021099 3 0.977 - - - - - 0.977 sine oculis-related homeobox 6 [Source:MGI Symbol;Acc:MGI:1341840]
9. Gm6425 ENSMUSG00000086174 3 0.977 - - - - - 0.977 predicted pseudogene 6425 [Source:MGI Symbol;Acc:MGI:3646016]
10. Gm12468 ENSMUSG00000083985 14 0.977 - - - - - 0.977 predicted gene 12468 [Source:MGI Symbol;Acc:MGI:3652115]
11. Hmgxb3 ENSMUSG00000024622 6 0.977 - - - - - 0.977 HMG box domain containing 3 [Source:MGI Symbol;Acc:MGI:2441817]
12. Gm17435 ENSMUSG00000097000 13 0.977 - - - - - 0.977 predicted gene, 17435 [Source:MGI Symbol;Acc:MGI:4937069]
13. Gm17219 ENSMUSG00000090855 3 0.977 - - - - - 0.977 predicted gene 17219 [Source:MGI Symbol;Acc:MGI:4938046]
14. Ccdc169 ENSMUSG00000048655 17 0.977 - - - - - 0.977 coiled-coil domain containing 169 [Source:MGI Symbol;Acc:MGI:2444356]
15. Gm26788 ENSMUSG00000096992 3 0.971 - - - - - 0.971 predicted gene, 26788 [Source:MGI Symbol;Acc:MGI:5477282]
16. Pkhd1 ENSMUSG00000043760 14 0.971 - - - - - 0.971 polycystic kidney and hepatic disease 1 [Source:MGI Symbol;Acc:MGI:2155808]
17. Cldn19 ENSMUSG00000066058 14 0.97 - - - - - 0.970 claudin 19 [Source:MGI Symbol;Acc:MGI:3033992]
18. Gm10544 ENSMUSG00000097430 3 0.969 - - - - - 0.969 predicted gene 10544 [Source:MGI Symbol;Acc:MGI:3642892]
19. Scn11a ENSMUSG00000034115 6 0.968 0.968 - - - - - sodium channel, voltage-gated, type XI, alpha [Source:MGI Symbol;Acc:MGI:1345149]
20. Gm16754 ENSMUSG00000097439 8 0.964 - - - - - 0.964 predicted gene, 16754 [Source:MGI Symbol;Acc:MGI:4439678]
21. Ubl7 ENSMUSG00000055720 10 0.96 - - - - - 0.960 ubiquitin-like 7 (bone marrow stromal cell-derived) [Source:MGI Symbol;Acc:MGI:1916709]
22. Gm6139 ENSMUSG00000057244 13 0.956 - - - - - 0.956 predicted gene 6139 [Source:MGI Symbol;Acc:MGI:3643279]
23. Gm25395 ENSMUSG00000087968 43 0.956 - - - - - 0.956 predicted gene, 25395 [Source:MGI Symbol;Acc:MGI:5455172]
24. Zfp112 ENSMUSG00000052675 56 0.955 - - - - - 0.955 zinc finger protein 112 [Source:MGI Symbol;Acc:MGI:1929115]
25. Gm16386 ENSMUSG00000096975 11 0.954 - - - - - 0.954 predicted gene 16386 [Source:MGI Symbol;Acc:MGI:3646848]
26. Gm26862 ENSMUSG00000097644 5 0.953 0.953 - - - - - predicted gene, 26862 [Source:MGI Symbol;Acc:MGI:5477356]
27. Igkc ENSMUSG00000076609 1 0.953 0.953 - - - - - immunoglobulin kappa constant [Source:MGI Symbol;Acc:MGI:96495]
28. Efhc2 ENSMUSG00000025038 12 0.953 0.953 - - - - - EF-hand domain (C-terminal) containing 2 [Source:MGI Symbol;Acc:MGI:1921655]
29. Adora2a ENSMUSG00000020178 5 0.953 0.953 - - - - - adenosine A2a receptor [Source:MGI Symbol;Acc:MGI:99402]
30. Gm12025 ENSMUSG00000081054 1 0.953 0.953 - - - - - predicted gene 12025 [Source:MGI Symbol;Acc:MGI:3651188]
31. Gm20400 ENSMUSG00000092500 1 0.953 0.953 - - - - - predicted gene 20400 [Source:MGI Symbol;Acc:MGI:5141865]
32. Vmo1 ENSMUSG00000020830 4 0.953 0.953 - - - - - vitelline membrane outer layer 1 homolog (chicken) [Source:MGI Symbol;Acc:MGI:2685587]
33. AW047730 ENSMUSG00000097428 42 0.953 0.953 - - - - - expressed sequence AW047730 [Source:MGI Symbol;Acc:MGI:2139951]
34. Gm22676 ENSMUSG00000080622 1 0.953 0.953 - - - - - predicted gene, 22676 [Source:MGI Symbol;Acc:MGI:5452453]
35. Ackr2 ENSMUSG00000044534 4 0.953 0.953 - - - - - atypical chemokine receptor 2 [Source:MGI Symbol;Acc:MGI:1891697]
36. Epha1 ENSMUSG00000029859 16 0.953 0.953 - - - - - Eph receptor A1 [Source:MGI Symbol;Acc:MGI:107381]
37. 5033403F01Rik ENSMUSG00000096932 4 0.953 0.953 - - - - - RIKEN cDNA 5033403F01 gene [Source:MGI Symbol;Acc:MGI:1923208]
38. Gm13777 ENSMUSG00000082108, ENSMUSG00000111592 3 0.953 0.953 - - - - - predicted gene 13777 [Source:MGI Symbol;Acc:MGI:3650376]
39. Wfikkn2 ENSMUSG00000044177 30 0.953 0.953 - - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 [Source:MGI Symbol;Acc:MGI:2669209]
40. Ly6f ENSMUSG00000022583 4 0.953 0.953 - - - - - lymphocyte antigen 6 complex, locus F [Source:MGI Symbol;Acc:MGI:109441]
41. Hspa1l ENSMUSG00000007033 4 0.953 0.953 - - - - - heat shock protein 1-like [Source:MGI Symbol;Acc:MGI:96231]
42. Gm21759 ENSMUSG00000094226 2 0.953 0.953 - - - - - predicted gene, 21759 [Source:MGI Symbol;Acc:MGI:5433923]
43. C130060C02Rik ENSMUSG00000097557 17 0.953 0.953 - - - - - RIKEN cDNA C130060C02 gene [Source:MGI Symbol;Acc:MGI:3041192]
44. Dgat2l6 ENSMUSG00000067597 1 0.953 0.953 - - - - - diacylglycerol O-acyltransferase 2-like 6 [Source:MGI Symbol;Acc:MGI:3045268]
45. Gm14133 ENSMUSG00000087029 4 0.953 0.953 - - - - - predicted gene 14133 [Source:MGI Symbol;Acc:MGI:3651594]
46. Sirpb1c ENSMUSG00000074677, ENSMUSG00000106923 6 0.953 0.953 - - - - - signal-regulatory protein beta 1C [Source:MGI Symbol;Acc:MGI:3807521]
47. Gm16365 ENSMUSG00000086915 59 0.953 0.953 - - - - - predicted gene 16365 [Source:MGI Symbol;Acc:MGI:3840143]
48. Gm5160 ENSMUSG00000055795 8 0.953 0.953 - - - - - predicted gene 5160 [Source:MGI Symbol;Acc:MGI:3648528]
49. Mx2 ENSMUSG00000023341 6 0.953 0.953 - - - - - MX dynamin-like GTPase 2 [Source:MGI Symbol;Acc:MGI:97244]
50. AI849053 ENSMUSG00000097280 13 0.953 0.953 - - - - - expressed sequence AI849053 [Source:MGI Symbol;Acc:MGI:2139818]
51. Sbk2 ENSMUSG00000030433 11 0.953 0.953 - - - - - SH3-binding domain kinase family, member 2 [Source:MGI Symbol;Acc:MGI:2685925]
52. Tmem139 ENSMUSG00000071506 6 0.953 0.953 - - - - - transmembrane protein 139 [Source:MGI Symbol;Acc:MGI:1924444]
53. Bglap3 ENSMUSG00000074489 7 0.953 0.953 - - - - - bone gamma-carboxyglutamate protein 3 [Source:MGI Symbol;Acc:MGI:88155]
54. Dnase2b ENSMUSG00000028185 9 0.953 0.953 - - - - - deoxyribonuclease II beta [Source:MGI Symbol;Acc:MGI:1913283]
55. Sidt1 ENSMUSG00000022696 8 0.953 0.953 - - - - - SID1 transmembrane family, member 1 [Source:MGI Symbol;Acc:MGI:2443155]
56. Gm24489 Gm24489 8 0.95 - - - - - 0.950
57. Mettl3 ENSMUSG00000022160 30 0.949 - - - - - 0.949 methyltransferase like 3 [Source:MGI Symbol;Acc:MGI:1927165]
58. 1700030C12Rik ENSMUSG00000086459 4 0.949 - - - - - 0.949 RIKEN cDNA 1700030C12 gene [Source:MGI Symbol;Acc:MGI:1919496]
59. Cdh23 ENSMUSG00000012819 17 0.946 - - - - - 0.946 cadherin 23 (otocadherin) [Source:MGI Symbol;Acc:MGI:1890219]
60. Sowahd ENSMUSG00000044400 11 0.94 - - - - - 0.940 sosondowah ankyrin repeat domain family member D [Source:MGI Symbol;Acc:MGI:3045274]
61. 4833422C13Rik ENSMUSG00000074782 10 0.938 - - - - - 0.938 RIKEN cDNA 4833422C13 gene [Source:MGI Symbol;Acc:MGI:3603826]
62. Clcnka ENSMUSG00000033770 16 0.937 - - - - - 0.937 chloride channel, voltage-sensitive Ka [Source:MGI Symbol;Acc:MGI:1329026]
63. E230001N04Rik ENSMUSG00000066170 39 0.936 - - - - - 0.936 RIKEN cDNA E230001N04 gene [Source:MGI Symbol;Acc:MGI:2443549]
64. Htr3b ENSMUSG00000008590 22 0.935 - - - - - 0.935 5-hydroxytryptamine (serotonin) receptor 3B [Source:MGI Symbol;Acc:MGI:1861899]
65. 2010007H06Rik ENSMUSG00000044694 25 0.935 - - - - - 0.935 RIKEN cDNA 2010007H06 gene [Source:MGI Symbol;Acc:MGI:1917099]
66. Prr15l ENSMUSG00000047040 24 0.93 - - - - - 0.930 proline rich 15-like [Source:MGI Symbol;Acc:MGI:2387599]
67. Traf1 ENSMUSG00000026875 9 0.929 - - - - - 0.929 TNF receptor-associated factor 1 [Source:MGI Symbol;Acc:MGI:101836]
68. Fbxo15 ENSMUSG00000034391 14 0.926 - - - - - 0.926 F-box protein 15 [Source:MGI Symbol;Acc:MGI:1354755]
69. Cstad ENSMUSG00000047363 22 0.926 - - - - - 0.926 CSA-conditional, T cell activation-dependent protein [Source:MGI Symbol;Acc:MGI:1925867]
70. Cnksr1 ENSMUSG00000028841 45 0.925 - - - - - 0.925 connector enhancer of kinase suppressor of Ras 1 [Source:MGI Symbol;Acc:MGI:2670958]
71. Gm5453 ENSMUSG00000062461 26 0.924 - - - - - 0.924 predicted gene 5453 [Source:MGI Symbol;Acc:MGI:3648523]
72. Slc25a34 ENSMUSG00000040740 6 0.924 - - - - - 0.924 solute carrier family 25, member 34 [Source:MGI Symbol;Acc:MGI:2686215]
73. 1810019J16Rik 1810019J16Rik 121 0.922 - - - - - 0.922
74. Gm26826 ENSMUSG00000097635 33 0.922 - - - - - 0.922 predicted gene, 26826 [Source:MGI Symbol;Acc:MGI:5477320]
75. Emx1 ENSMUSG00000033726 16 0.921 - - - - - 0.921 empty spiracles homeobox 1 [Source:MGI Symbol;Acc:MGI:95387]
76. Prr16 ENSMUSG00000073565 31 0.92 - - - - - 0.920 proline rich 16 [Source:MGI Symbol;Acc:MGI:1918623]
77. Pkdrej ENSMUSG00000052496 7 0.905 - - - - - 0.905 polycystin (PKD) family receptor for egg jelly [Source:MGI Symbol;Acc:MGI:1338786]
78. a ENSMUSG00000027596 75 0.904 - - - - - 0.904 nonagouti [Source:MGI Symbol;Acc:MGI:87853]
79. Anxa1 ENSMUSG00000024659 60 0.902 - - - - - 0.902 annexin A1 [Source:MGI Symbol;Acc:MGI:96819]
80. Oaz2-ps ENSMUSG00000083610 8 0.901 - - - - - 0.901 ornithine decarboxylase antizyme 2, pseudogene [Source:MGI Symbol;Acc:MGI:3644634]
81. Gm13398 ENSMUSG00000087364 26 0.898 - - - - - 0.898 predicted gene 13398 [Source:MGI Symbol;Acc:MGI:3652315]
82. Tubb4b-ps1 ENSMUSG00000095159 12 0.898 - - - - - 0.898 tubulin, beta 4B class IVB, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3642800]
83. Gm5616 ENSMUSG00000063543 46 0.895 - - - - - 0.895 predicted gene 5616 [Source:MGI Symbol;Acc:MGI:3646416]
84. Add2 ENSMUSG00000030000 32 0.893 - - - - - 0.893 adducin 2 (beta) [Source:MGI Symbol;Acc:MGI:87919]
85. Tmem221 ENSMUSG00000043664 8 0.889 - - - - - 0.889 transmembrane protein 221 [Source:MGI Symbol;Acc:MGI:3525074]
86. BC043934 ENSMUSG00000056418 25 0.888 - - - - - 0.888 cDNA sequence BC043934 [Source:MGI Symbol;Acc:MGI:2679715]
87. Gm9796 ENSMUSG00000045075 14 0.887 - - - - - 0.887 predicted gene 9796 [Source:MGI Symbol;Acc:MGI:3648412]
88. Bspry ENSMUSG00000028392 37 0.886 - - - - - 0.886 B-box and SPRY domain containing [Source:MGI Symbol;Acc:MGI:2177191]
89. Rnase1 ENSMUSG00000035896 6 0.875 - - - - - 0.875 ribonuclease, RNase A family, 1 (pancreatic) [Source:MGI Symbol;Acc:MGI:97919]
90. Gm14318 Gm14318 6 0.873 - - - - 0.873 -
91. Ptma-ps1 ENSMUSG00000095331 29 0.873 - - - - 0.873 - prothymosin alpha, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3644252]
92. Gm4963 ENSMUSG00000063739 18 0.87 - - - - - 0.870 predicted gene 4963 [Source:MGI Symbol;Acc:MGI:3645168]
93. Dedd ENSMUSG00000013973 6 0.87 - - - - - 0.870 death effector domain-containing [Source:MGI Symbol;Acc:MGI:1333874]
94. Aqp1 ENSMUSG00000004655 53 0.868 - - - - - 0.868 aquaporin 1 [Source:MGI Symbol;Acc:MGI:103201]
95. Hapln3 ENSMUSG00000030606 185 0.867 - - - - - 0.867 hyaluronan and proteoglycan link protein 3 [Source:MGI Symbol;Acc:MGI:1914916]
96. Dfnb59 23 0.861 - - - - - 0.861 deafness, autosomal recessive 59 (human), transcript variant X1
97. 5430400D12Rik ENSMUSG00000097699 34 0.852 - 0.852 - - - - RIKEN cDNA 5430400D12 gene [Source:MGI Symbol;Acc:MGI:1918589]
98. AI848285 AI848285 11 0.85 0.850 - - - - -
99. Snora33 ENSMUSG00000070063 12 0.846 - - - - 0.846 - small nucleolar RNA, H/ACA box 33 [Source:MGI Symbol;Acc:MGI:3819501]
100. Hpn ENSMUSG00000001249 48 0.846 - - - - - 0.846 hepsin [Source:MGI Symbol;Acc:MGI:1196620]

There are 143 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA