Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Arid5a

Gene Name Gene ID Reads Annotation
Arid5a ENSMUSG00000037447 37 AT rich interactive domain 5A (MRF1-like) [Source:MGI Symbol;Acc:MGI:2443039]







Genes with expression patterns similar to Arid5a

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Arid5a ENSMUSG00000037447 37 6 1.000 1.000 1.000 1.000 1.000 1.000 AT rich interactive domain 5A (MRF1-like) [Source:MGI Symbol;Acc:MGI:2443039]
2. Acaa1b ENSMUSG00000010651 3 1.51 - - 0.764 - 0.746 - acetyl-Coenzyme A acyltransferase 1B [Source:MGI Symbol;Acc:MGI:3605455]
3. Slc26a10 ENSMUSG00000040441 17 1.495 - - 0.782 0.713 - - solute carrier family 26, member 10 [Source:MGI Symbol;Acc:MGI:2143920]
4. Gm11630 ENSMUSG00000086917 9 1.459 - - - 0.713 0.746 - predicted gene 11630 [Source:MGI Symbol;Acc:MGI:3650475]
5. Caln1 ENSMUSG00000060371 19 0.872 - - - - 0.872 - calneuron 1 [Source:MGI Symbol;Acc:MGI:2155987]
6. Tulp1 ENSMUSG00000037446 33 0.863 0.863 - - - - - tubby like protein 1 [Source:MGI Symbol;Acc:MGI:109571]
7. Hspa1a ENSMUSG00000091971 39 0.857 0.857 - - - - - heat shock protein 1A [Source:MGI Symbol;Acc:MGI:96244]
8. Gm4980 Gm4980 19 0.851 - - 0.851 - - -
9. Slc10a1 ENSMUSG00000021135 2 0.843 0.843 - - - - - solute carrier family 10 (sodium/bile acid cotransporter family), member 1 [Source:MGI Symbol;Acc:MGI:97379]
10. Tdrd6 ENSMUSG00000040140 3 0.843 0.843 - - - - - tudor domain containing 6 [Source:MGI Symbol;Acc:MGI:2679727]
11. Gm10610 ENSMUSG00000094841 3 0.843 0.843 - - - - - predicted gene 10610 [Source:MGI Symbol;Acc:MGI:3642045]
12. Gm12096 ENSMUSG00000081712 1 0.843 0.843 - - - - - predicted gene 12096 [Source:MGI Symbol;Acc:MGI:3651583]
13. 4930432E11Rik ENSMUSG00000046958 1 0.843 0.843 - - - - - RIKEN cDNA 4930432E11 gene [Source:MGI Symbol;Acc:MGI:3045259]
14. Rdh1 ENSMUSG00000089789 5 0.843 0.843 - - - - - retinol dehydrogenase 1 (all trans) [Source:MGI Symbol;Acc:MGI:1195275]
15. Rpl17-ps5 ENSMUSG00000081855 19 0.843 0.843 - - - - - ribosomal protein L17, pseudogene 5 [Source:MGI Symbol;Acc:MGI:3704246]
16. Gm904 ENSMUSG00000096641 9 0.843 0.843 - - - - - predicted gene 904 [Source:MGI Symbol;Acc:MGI:2685750]
17. AC114591.1 AC114591.1 1 0.843 0.843 - - - - -
18. Ceacam19 ENSMUSG00000049848 2 0.843 0.843 - - - - - carcinoembryonic antigen-related cell adhesion molecule 19 [Source:MGI Symbol;Acc:MGI:2443001]
19. Gm13487 ENSMUSG00000083449 2 0.843 0.843 - - - - - predicted gene 13487 [Source:MGI Symbol;Acc:MGI:3650141]
20. Gm6345 ENSMUSG00000096964 7 0.843 0.843 - - - - - predicted gene 6345 [Source:MGI Symbol;Acc:MGI:3647370]
21. Ugt3a2 ENSMUSG00000049152 5 0.843 0.843 - - - - - UDP glycosyltransferases 3 family, polypeptide A2 [Source:MGI Symbol;Acc:MGI:2145969]
22. 4932442L08Rik 4932442L08Rik 4 0.843 0.843 - - - - -
23. Gm3261 ENSMUSG00000093892 1 0.843 0.843 - - - - - predicted gene 3261 [Source:MGI Symbol;Acc:MGI:3781439]
24. 4933413C19Rik ENSMUSG00000089952 1 0.843 0.843 - - - - - RIKEN cDNA 4933413C19 gene [Source:MGI Symbol;Acc:MGI:1921702]
25. Gm25989 ENSMUSG00000096684 2 0.843 0.843 - - - - - predicted gene, 25989 [Source:MGI Symbol;Acc:MGI:5455766]
26. Gm14197 ENSMUSG00000083732 3 0.843 0.843 - - - - - predicted gene 14197 [Source:MGI Symbol;Acc:MGI:3652057]
27. 4930412O13Rik ENSMUSG00000025783 1 0.843 0.843 - - - - - RIKEN cDNA 4930412O13 gene [Source:MGI Symbol;Acc:MGI:1921185]
28. D430001F17Rik ENSMUSG00000087190 5 0.843 0.843 - - - - - RIKEN cDNA D430001F17 gene [Source:MGI Symbol;Acc:MGI:2441973]
29. Boll ENSMUSG00000025977 6 0.843 0.843 - - - - - boule homolog, RNA binding protein [Source:MGI Symbol;Acc:MGI:1922638]
30. Trpm8 ENSMUSG00000036251 2 0.843 0.843 - - - - - transient receptor potential cation channel, subfamily M, member 8 [Source:MGI Symbol;Acc:MGI:2181435]
31. Rpl31-ps12 ENSMUSG00000116648 8 0.839 0.839 - - - - - ribosomal protein L31, pseudogene 1 2 [Source:NCBI gene;Acc:665562]
32. Rem1 ENSMUSG00000000359 10 0.838 0.838 - - - - - rad and gem related GTP binding protein 1 [Source:MGI Symbol;Acc:MGI:1097696]
33. Smtnl1 ENSMUSG00000027077 5 0.838 0.838 - - - - - smoothelin-like 1 [Source:MGI Symbol;Acc:MGI:1915928]
34. Cys1 ENSMUSG00000062563 20 0.836 0.836 - - - - - cystin 1 [Source:MGI Symbol;Acc:MGI:2177632]
35. Hpn ENSMUSG00000001249 48 0.836 0.836 - - - - - hepsin [Source:MGI Symbol;Acc:MGI:1196620]
36. Gm14696 ENSMUSG00000087369 10 0.832 - - 0.832 - - - predicted gene 14696 [Source:MGI Symbol;Acc:MGI:3705257]
37. Yjefn3 ENSMUSG00000048967 70 0.829 - - 0.829 - - - YjeF N-terminal domain containing 3 [Source:MGI Symbol;Acc:MGI:2681845]
38. Awat2 ENSMUSG00000031220 21 0.819 0.819 - - - - - acyl-CoA wax alcohol acyltransferase 2 [Source:MGI Symbol;Acc:MGI:3045345]
39. Gm5914 ENSMUSG00000098120 75 0.818 0.818 - - - - - predicted gene 5914 [Source:MGI Symbol;Acc:MGI:3779534]
40. Zfp354b ENSMUSG00000020335 56 0.806 - - 0.806 - - - zinc finger protein 354B [Source:MGI Symbol;Acc:MGI:1351476]
41. Gm6938 ENSMUSG00000087586 8 0.803 - 0.803 - - - - predicted gene 6938 [Source:MGI Symbol;Acc:MGI:3648987]
42. Gm13236 ENSMUSG00000087513 9 0.802 - - 0.802 - - - predicted gene 13236 [Source:MGI Symbol;Acc:MGI:3705163]
43. Apoc2 ENSMUSG00000002992 36 0.796 - - 0.796 - - - apolipoprotein C-II [Source:MGI Symbol;Acc:MGI:88054]
44. Gm13199 ENSMUSG00000056718 72 0.796 - - 0.796 - - - predicted gene 13199 [Source:MGI Symbol;Acc:MGI:3649231]
45. Prr18 ENSMUSG00000055945 21 0.793 0.793 - - - - - proline rich 18 [Source:MGI Symbol;Acc:MGI:2443403]
46. Zfp853 ENSMUSG00000093910 3 0.793 - - 0.793 - - - zinc finger protein 853 [Source:MGI Symbol;Acc:MGI:2685638]
47. Cd200r3 ENSMUSG00000036172 13 0.792 - - 0.792 - - - CD200 receptor 3 [Source:MGI Symbol;Acc:MGI:1921853]
48. Gm14808 ENSMUSG00000085553 16 0.791 0.791 - - - - - predicted gene 14808 [Source:MGI Symbol;Acc:MGI:3705252]
49. Gm10463 ENSMUSG00000102759 12 0.79 - - 0.790 - - - predicted gene 10463 [Source:MGI Symbol;Acc:MGI:3642170]
50. C1qa ENSMUSG00000036887 38 0.79 0.790 - - - - - complement component 1, q subcomponent, alpha polypeptide [Source:MGI Symbol;Acc:MGI:88223]
51. Ccdc81 ENSMUSG00000039391 4 0.789 - - 0.789 - - - coiled-coil domain containing 81 [Source:MGI Symbol;Acc:MGI:1918134]
52. Sprr2f ENSMUSG00000050635 4 0.789 - - 0.789 - - - small proline-rich protein 2F [Source:MGI Symbol;Acc:MGI:1330349]
53. Dmkn ENSMUSG00000060962 5 0.788 - - 0.788 - - - dermokine [Source:MGI Symbol;Acc:MGI:1920962]
54. Fbxl7 ENSMUSG00000043556 38 0.788 - - 0.788 - - - F-box and leucine-rich repeat protein 7 [Source:MGI Symbol;Acc:MGI:3052506]
55. Crygd ENSMUSG00000067299 3 0.786 - - 0.786 - - - crystallin, gamma D [Source:MGI Symbol;Acc:MGI:88524]
56. Cyp2c70 ENSMUSG00000060613 3 0.786 - - 0.786 - - - cytochrome P450, family 2, subfamily c, polypeptide 70 [Source:MGI Symbol;Acc:MGI:2385878]
57. C3 ENSMUSG00000024164 24 0.786 - - 0.786 - - - complement component 3 [Source:MGI Symbol;Acc:MGI:88227]
58. Gm16028 ENSMUSG00000090252 4 0.786 - - 0.786 - - - predicted gene 16028 [Source:MGI Symbol;Acc:MGI:3801982]
59. Krtap5-4 ENSMUSG00000045236 2 0.786 - - 0.786 - - - keratin associated protein 5-4 [Source:MGI Symbol;Acc:MGI:1354758]
60. Alb ENSMUSG00000029368 370 0.786 - - 0.786 - - - albumin [Source:MGI Symbol;Acc:MGI:87991]
61. Gm14947 ENSMUSG00000086452 16 0.786 - - 0.786 - - - predicted gene 14947 [Source:MGI Symbol;Acc:MGI:3642731]
62. Gm6169 ENSMUSG00000057762 16 0.786 - - 0.786 - - - predicted gene 6169 [Source:MGI Symbol;Acc:MGI:3646298]
63. Olfr1505 ENSMUSG00000062314 2 0.786 - - 0.786 - - - olfactory receptor 1505 [Source:MGI Symbol;Acc:MGI:3031339]
64. Fam46d 4 0.786 - - 0.786 - - - family with sequence similarity 46, member D, transcript variant X1
65. Mesp1 ENSMUSG00000030544 3 0.786 - - 0.786 - - - mesoderm posterior 1 [Source:MGI Symbol;Acc:MGI:107785]
66. Gm16542 Gm16542 2 0.786 - - 0.786 - - -
67. 2900055J20Rik ENSMUSG00000071860 21 0.784 - - 0.784 - - - RIKEN cDNA 2900055J20 gene [Source:MGI Symbol;Acc:MGI:1920251]
68. Afp ENSMUSG00000054932 3253 0.783 - - 0.783 - - - alpha fetoprotein [Source:MGI Symbol;Acc:MGI:87951]
69. Gys2 ENSMUSG00000030244 18 0.782 - - 0.782 - - - glycogen synthase 2 [Source:MGI Symbol;Acc:MGI:2385254]
70. Gm6097 Gm6097 3 0.782 - - 0.782 - - -
71. Spire2 ENSMUSG00000010154 178 0.78 - - 0.780 - - - spire type actin nucleation factor 2 [Source:MGI Symbol;Acc:MGI:2446256]
72. Gpr179 ENSMUSG00000070337 20 0.776 - - 0.776 - - - G protein-coupled receptor 179 [Source:MGI Symbol;Acc:MGI:2443409]
73. Serpind1 ENSMUSG00000022766 52 0.775 - - 0.775 - - - serine (or cysteine) peptidase inhibitor, clade D, member 1 [Source:MGI Symbol;Acc:MGI:96051]
74. Gm12591 ENSMUSG00000082831 8 0.775 - - 0.775 - - - predicted gene 12591 [Source:MGI Symbol;Acc:MGI:3649887]
75. 4930426L09Rik ENSMUSG00000026736 4 0.774 - - 0.774 - - - RIKEN cDNA 4930426L09 gene [Source:MGI Symbol;Acc:MGI:1921879]
76. Cybrd1 ENSMUSG00000027015 70 0.773 - - 0.773 - - - cytochrome b reductase 1 [Source:MGI Symbol;Acc:MGI:2654575]
77. Gm26538 ENSMUSG00000097507 20 0.773 - - 0.773 - - - predicted gene, 26538 [Source:MGI Symbol;Acc:MGI:5477032]
78. Gm16519 ENSMUSG00000066983 36 0.773 - - 0.773 - - - predicted gene, 16519 [Source:MGI Symbol;Acc:MGI:4360871]
79. Gm11273 ENSMUSG00000079941 12 0.772 - - 0.772 - - - predicted gene 11273 [Source:MGI Symbol;Acc:MGI:3649411]
80. Hpdl ENSMUSG00000043155 15 0.771 - - 0.771 - - - 4-hydroxyphenylpyruvate dioxygenase-like [Source:MGI Symbol;Acc:MGI:2444646]
81. Dnah8 ENSMUSG00000033826 7 0.771 - - 0.771 - - - dynein, axonemal, heavy chain 8 [Source:MGI Symbol;Acc:MGI:107714]
82. Gm21846 ENSMUSG00000094832 50 0.77 - - 0.770 - - - predicted gene, 21846 [Source:MGI Symbol;Acc:MGI:5434010]
83. Tnk1 ENSMUSG00000001583 49 0.77 0.770 - - - - - tyrosine kinase, non-receptor, 1 [Source:MGI Symbol;Acc:MGI:1930958]
84. Mb ENSMUSG00000018893 25 0.769 0.769 - - - - - myoglobin [Source:MGI Symbol;Acc:MGI:96922]
85. 5930422O12Rik ENSMUSG00000048544 74 0.768 - - 0.768 - - - RIKEN cDNA 5930422O12 gene [Source:MGI Symbol;Acc:MGI:2442538]
86. Gm6787 ENSMUSG00000086404 13 0.767 - - 0.767 - - - predicted gene 6787 [Source:MGI Symbol;Acc:MGI:3646481]
87. Rtl1 ENSMUSG00000085925, ENSMUSG00000098639 15 0.766 - - 0.766 - - - retrotransposon Gaglike 1 [Source:MGI Symbol;Acc:MGI:2656842]
88. 4930529C04Rik ENSMUSG00000086377 5 0.766 - - - - 0.766 - RIKEN cDNA 4930529C04 gene [Source:MGI Symbol;Acc:MGI:1922392]
89. 6430550D23Rik ENSMUSG00000074646 32 0.765 - - 0.765 - - - RIKEN cDNA 6430550D23 gene [Source:MGI Symbol;Acc:MGI:2443361]
90. Gm8756 ENSMUSG00000098238 52 0.764 - - 0.764 - - - predicted gene 8756 [Source:MGI Symbol;Acc:MGI:3644333]
91. Gmnc ENSMUSG00000068428 7 0.762 - - 0.762 - - - geminin coiled-coil domain containing [Source:MGI Symbol;Acc:MGI:2685452]
92. 1700028J19Rik ENSMUSG00000038782 43 0.762 0.762 - - - - - RIKEN cDNA 1700028J19 gene [Source:MGI Symbol;Acc:MGI:1917254]
93. Nyap1 ENSMUSG00000045348 31 0.761 0.761 - - - - - neuronal tyrosine-phosphorylated phosphoinositide 3-kinase adaptor 1 [Source:MGI Symbol;Acc:MGI:2443880]
94. Klb ENSMUSG00000029195 3 0.76 - - 0.760 - - - klotho beta [Source:MGI Symbol;Acc:MGI:1932466]
95. AU041133 ENSMUSG00000078435 57 0.757 - - 0.757 - - - expressed sequence AU041133 [Source:MGI Symbol;Acc:MGI:2143755]
96. Clhc1 ENSMUSG00000020461 6 0.757 0.757 - - - - - clathrin heavy chain linker domain containing 1 [Source:MGI Symbol;Acc:MGI:1920574]
97. Gm26862 ENSMUSG00000097644 5 0.754 - - 0.754 - - - predicted gene, 26862 [Source:MGI Symbol;Acc:MGI:5477356]
98. Col17a1 ENSMUSG00000025064 11 0.754 - - 0.754 - - - collagen, type XVII, alpha 1 [Source:MGI Symbol;Acc:MGI:88450]
99. Rnf207 ENSMUSG00000058498 72 0.753 - - 0.753 - - - ring finger protein 207 [Source:MGI Symbol;Acc:MGI:2684989]
100. Cd300ld ENSMUSG00000034641 6 0.753 - - 0.753 - - - CD300 molecule like family member d [Source:MGI Symbol;Acc:MGI:2442358]

There are 223 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA