Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for RD3

Gene Name Gene ID Reads Annotation
RD3 ENSG00000198570 8 retinal degeneration 3, GUCY2D regulator [Source:HGNC Symbol;Acc:HGNC:19689]



Genes with expression patterns similar to RD3

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. RD3 ENSG00000198570 8 2 1.000 1.000 retinal degeneration 3, GUCY2D regulator [Source:HGNC Symbol;Acc:HGNC:19689]
2. BAALC-AS2 ENSG00000236939 2 1 1.000 - BAALC antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:28595]
3. FIBCD1 ENSG00000130720 5 1 1.000 - fibrinogen C domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25922]
4. LOC101928858 2 1 1.000 - uncharacterized LOC101928858
5. PCDHGB5 ENSG00000276547 4 1 1.000 - protocadherin gamma subfamily B, 5 [Source:HGNC Symbol;Acc:HGNC:8712]
6. VWA7 ENSG00000204396, ENSG00000223757, ENSG00000227144, ENSG00000230048, ENSG00000234433, ENSG00000238203 2 1 1.000 - von Willebrand factor A domain containing 7 [Source:HGNC Symbol;Acc:HGNC:13939]
7. LOC101927709 3 1 1.000 - uncharacterized LOC101927709
8. SEC16B ENSG00000120341 5 1 1.000 - SEC16 homolog B, endoplasmic reticulum export factor [Source:HGNC Symbol;Acc:HGNC:30301]
9. PPP1R27 ENSG00000182676 3 1 1.000 - protein phosphatase 1 regulatory subunit 27 [Source:HGNC Symbol;Acc:HGNC:16813]
10. C4orf17 ENSG00000138813 2 1 1.000 - chromosome 4 open reading frame 17 [Source:HGNC Symbol;Acc:HGNC:25274]
11. TRAF3IP3 ENSG00000009790 16 1 1.000 - TRAF3 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:30766]
12. MLK7-AS1 5 1 1.000 - MLK7 antisense RNA 1
13. LOC101928105 3 1 1.000 - uncharacterized LOC101928105
14. FRK ENSG00000111816 7 1 1.000 - fyn related Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3955]
15. LOC100506675 3 1 1.000 - uncharacterized LOC100506675, transcript variant 2
16. OR4N3P ENSG00000259435 4 1 1.000 - olfactory receptor family 4 subfamily N member 3 pseudogene [Source:HGNC Symbol;Acc:HGNC:15374]
17. LINC01044 ENSG00000223626, ENSG00000282737 2 1 1.000 - long intergenic non-protein coding RNA 1044 [Source:HGNC Symbol;Acc:HGNC:49032]
18. LYPLAL1-AS1 6 1 1.000 - LYPLAL1 antisense RNA 1 (head to head)
19. SNORA57 ENSG00000206597 6 1 1.000 - small nucleolar RNA, H/ACA box 57 [Source:HGNC Symbol;Acc:HGNC:32651]
20. ODF3L2 ENSG00000181781 2 1 1.000 - outer dense fiber of sperm tails 3 like 2 [Source:HGNC Symbol;Acc:HGNC:26841]
21. LHX9 ENSG00000143355 13 0.878 - 0.878 LIM homeobox 9 [Source:HGNC Symbol;Acc:HGNC:14222]
22. GPRIN3 ENSG00000185477 114 0.845 0.845 - GPRIN family member 3 [Source:HGNC Symbol;Acc:HGNC:27733]
23. WDR49 ENSG00000174776 7 0.845 - 0.845 WD repeat domain 49 [Source:HGNC Symbol;Acc:HGNC:26587]
24. KRT6B ENSG00000185479 3 0.839 - 0.839 keratin 6B [Source:HGNC Symbol;Acc:HGNC:6444]
25. LCE1C ENSG00000197084 6 0.839 - 0.839 late cornified envelope 1C [Source:HGNC Symbol;Acc:HGNC:29464]
26. CASC23 ENSG00000255420 3 0.839 - 0.839 cancer susceptibility 23 [Source:HGNC Symbol;Acc:HGNC:50865]
27. RUFY4 ENSG00000188282 3 0.839 - 0.839 RUN and FYVE domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24804]
28. IGSF22 ENSG00000179057 6 0.836 - 0.836 immunoglobulin superfamily member 22 [Source:HGNC Symbol;Acc:HGNC:26750]
29. ZNF365 ENSG00000138311 16 0.832 - 0.832 zinc finger protein 365 [Source:HGNC Symbol;Acc:HGNC:18194]
30. PCDHGC5 ENSG00000240764 3 0.83 - 0.830 protocadherin gamma subfamily C, 5 [Source:HGNC Symbol;Acc:HGNC:8718]
31. LALBA ENSG00000167531 3 0.823 - 0.823 lactalbumin alpha [Source:HGNC Symbol;Acc:HGNC:6480]
32. GSTM2 ENSG00000213366 24 0.822 - 0.822 glutathione S-transferase mu 2 [Source:HGNC Symbol;Acc:HGNC:4634]
33. CLCN1 ENSG00000188037 5 0.819 0.819 - chloride voltage-gated channel 1 [Source:HGNC Symbol;Acc:HGNC:2019]
34. PTGER1 ENSG00000160951 5 0.815 0.815 - prostaglandin E receptor 1 [Source:HGNC Symbol;Acc:HGNC:9593]
35. ARHGDIG ENSG00000242173 5 0.815 0.815 - Rho GDP dissociation inhibitor gamma [Source:HGNC Symbol;Acc:HGNC:680]
36. KLHL1 ENSG00000150361 29 0.813 - 0.813 kelch like family member 1 [Source:HGNC Symbol;Acc:HGNC:6352]
37. SIRPG ENSG00000089012 6 0.798 - 0.798 signal regulatory protein gamma [Source:HGNC Symbol;Acc:HGNC:15757]
38. FAM72B ENSG00000188610 12 0.797 - 0.797 family with sequence similarity 72 member B [Source:HGNC Symbol;Acc:HGNC:24805]
39. LINC01272 8 0.788 0.788 - long intergenic non-protein coding RNA 1272, transcript variant X1
40. SLC10A2 ENSG00000125255 30 0.779 - 0.779 solute carrier family 10 member 2 [Source:HGNC Symbol;Acc:HGNC:10906]
41. VCX ENSG00000182583 4 0.777 - 0.777 variable charge X-linked [Source:HGNC Symbol;Acc:HGNC:12667]
42. SUN3 ENSG00000164744 7 0.77 - 0.770 Sad1 and UNC84 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:22429]
43. C8A ENSG00000157131 23 0.766 0.766 - complement C8 alpha chain [Source:HGNC Symbol;Acc:HGNC:1352]
44. OR7E91P ENSG00000205847 15 0.766 0.766 - olfactory receptor family 7 subfamily E member 91 pseudogene [Source:HGNC Symbol;Acc:HGNC:14747]
45. FRRS1L ENSG00000260230 7 0.764 0.764 - ferric chelate reductase 1 like [Source:HGNC Symbol;Acc:HGNC:1362]
46. SSTR5-AS1 ENSG00000261713 7 0.764 0.764 - SSTR5 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:26502]
47. DCT ENSG00000080166 7 0.759 - 0.759 dopachrome tautomerase [Source:HGNC Symbol;Acc:HGNC:2709]
48. LOC440173 26 0.755 - 0.755 uncharacterized LOC440173
49. SEMA6A-AS1 ENSG00000248445 15 0.754 - 0.754 SEMA6A antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51110]
50. DCANP1 ENSG00000251380 5 0.753 - 0.753 dendritic cell associated nuclear protein [Source:HGNC Symbol;Acc:HGNC:24459]
51. ALS2CR12 ENSG00000155749 16 0.752 0.752 - amyotrophic lateral sclerosis 2 chromosome region 12 [Source:HGNC Symbol;Acc:HGNC:14439]
52. KRT9 ENSG00000171403 4 0.752 0.752 - keratin 9 [Source:HGNC Symbol;Acc:HGNC:6447]
53. LOC391322 5 0.748 - 0.748 D-dopachrome tautomerase-like
54. KIFC2 ENSG00000167702 10 0.746 0.746 - kinesin family member C2 [Source:HGNC Symbol;Acc:HGNC:29530]
55. RORA-AS1 ENSG00000245534 8 0.742 0.742 - RORA antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51410]
56. LOC101060019 8 0.738 0.738 - uncharacterized LOC101060019
57. DHRS7C ENSG00000184544 38 0.738 0.738 - dehydrogenase/reductase 7C [Source:HGNC Symbol;Acc:HGNC:32423]
58. B4GALNT1 ENSG00000135454 93 0.735 - 0.735 beta-1,4-N-acetyl-galactosaminyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:4117]
59. TDRG1 ENSG00000204091 33 0.724 - 0.724 testis development related 1 [Source:HGNC Symbol;Acc:HGNC:43642]
60. FLJ22447 ENSG00000232774 5 0.723 - 0.723 uncharacterized LOC400221 [Source:NCBI gene;Acc:400221]
61. LOC100131655 16 0.719 - 0.719 uncharacterized LOC100131655
62. GOLGA6L10 ENSG00000274042, ENSG00000274166, ENSG00000278662 15 0.716 - 0.716 golgin A6 family-like 10 [Source:HGNC Symbol;Acc:HGNC:37228]
63. PNPLA1 ENSG00000180316 15 0.715 - 0.715 patatin like phospholipase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21246]
64. LOC102467213 4 0.706 0.706 - uncharacterized LOC102467213
65. WNT10B ENSG00000169884 23 0.704 - 0.704 Wnt family member 10B [Source:HGNC Symbol;Acc:HGNC:12775]
66. LINC01101 ENSG00000280409 5 0.703 0.703 - long intergenic non-protein coding RNA 1101 [Source:HGNC Symbol;Acc:HGNC:25923]
67. LOC283856 7 0.703 0.703 - uncharacterized LOC283856
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA