Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LINC01220

Gene Name Gene ID Reads Annotation
LINC01220 ENSG00000259687 10 long intergenic non-protein coding RNA 1220 [Source:HGNC Symbol;Acc:HGNC:49664]



Genes with expression patterns similar to LINC01220

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LINC01220 ENSG00000259687 10 2 1.000 1.000 long intergenic non-protein coding RNA 1220 [Source:HGNC Symbol;Acc:HGNC:49664]
2. ARL14 ENSG00000179674 1 1 1.000 - ADP ribosylation factor like GTPase 14 [Source:HGNC Symbol;Acc:HGNC:22974]
3. CYP1A2 ENSG00000140505 4 1 1.000 - cytochrome P450 family 1 subfamily A member 2 [Source:HGNC Symbol;Acc:HGNC:2596]
4. RASSF9 ENSG00000198774 23 1 1.000 - Ras association domain family member 9 [Source:HGNC Symbol;Acc:HGNC:15739]
5. VWA5B2 ENSG00000145198 2 1 1.000 - von Willebrand factor A domain containing 5B2 [Source:HGNC Symbol;Acc:HGNC:25144]
6. NHLRC4 ENSG00000257108 18 1 1.000 - NHL repeat containing 4 [Source:HGNC Symbol;Acc:HGNC:26700]
7. HSD11B1 ENSG00000117594 1 1 1.000 - hydroxysteroid 11-beta dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:5208]
8. VWA3B ENSG00000168658 5 1 1.000 - von Willebrand factor A domain containing 3B [Source:HGNC Symbol;Acc:HGNC:28385]
9. LOC101929023 2 1 1.000 - uncharacterized LOC101929023, transcript variant 2
10. MMP19 ENSG00000123342 3 1 1.000 - matrix metallopeptidase 19 [Source:HGNC Symbol;Acc:HGNC:7165]
11. CETN4P ENSG00000224786 3 1 1.000 - centrin 4, pseudogene [Source:HGNC Symbol;Acc:HGNC:35450]
12. TNP2 ENSG00000178279 3 1 1.000 - transition protein 2 [Source:HGNC Symbol;Acc:HGNC:11952]
13. SNORD127 ENSG00000239043 1 1 1.000 - small nucleolar RNA, C/D box 127 [Source:HGNC Symbol;Acc:HGNC:33555]
14. LINC00577 LINC00577 6 1 1.000 -
15. IGF2BP2-AS1 ENSG00000163915 3 1 1.000 - IGF2BP2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:32674]
16. CD300LF ENSG00000186074 1 1 1.000 - CD300 molecule like family member f [Source:HGNC Symbol;Acc:HGNC:29883]
17. NLRP11 ENSG00000179873 5 1 1.000 - NLR family pyrin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:22945]
18. TMEM252 ENSG00000181778 1 1 1.000 - transmembrane protein 252 [Source:HGNC Symbol;Acc:HGNC:28537]
19. CD6 ENSG00000013725 5 1 1.000 - CD6 molecule [Source:HGNC Symbol;Acc:HGNC:1691]
20. MMP1 ENSG00000196611 1 1 1.000 - matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155]
21. PTGES3L-AARSD1 ENSG00000108825 5 1 1.000 - PTGES3L-AARSD1 readthrough [Source:HGNC Symbol;Acc:HGNC:43946]
22. LINC00032 ENSG00000283945 1 1 1.000 - long intergenic non-protein coding RNA 32 [Source:HGNC Symbol;Acc:HGNC:16506]
23. IQCJ ENSG00000214216 2 1 1.000 - IQ motif containing J [Source:HGNC Symbol;Acc:HGNC:32406]
24. LOC284395 2 1 1.000 - uncharacterized LOC284395
25. YWHAEP1 ENSG00000232727 6 1 1.000 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:49442]
26. TAS2R13 ENSG00000212128, ENSG00000273457, ENSG00000277254 2 1 1.000 - taste 2 receptor member 13 [Source:HGNC Symbol;Acc:HGNC:14919]
27. DEFA4 ENSG00000164821, ENSG00000285318 5 1 1.000 - defensin alpha 4 [Source:HGNC Symbol;Acc:HGNC:2763]
28. KRT3 ENSG00000186442 2 1 1.000 - keratin 3 [Source:HGNC Symbol;Acc:HGNC:6440]
29. SNTN ENSG00000188817 3 1 1.000 - sentan, cilia apical structure protein [Source:HGNC Symbol;Acc:HGNC:33706]
30. AADACP1 ENSG00000240602 2 1 1.000 - arylacetamide deacetylase pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:50305]
31. GFAP ENSG00000131095 3 1 1.000 - glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
32. ZNF280A ENSG00000169548, ENSG00000275499 54 1 1.000 - zinc finger protein 280A [Source:HGNC Symbol;Acc:HGNC:18597]
33. MID1IP1-AS1 ENSG00000238123 3 1 1.000 - MID1IP1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40932]
34. GLS2 ENSG00000135423 4 1 1.000 - glutaminase 2 [Source:HGNC Symbol;Acc:HGNC:29570]
35. ODF1 ENSG00000155087 2 1 1.000 - outer dense fiber of sperm tails 1 [Source:HGNC Symbol;Acc:HGNC:8113]
36. PDE6H ENSG00000139053 4 1 1.000 - phosphodiesterase 6H [Source:HGNC Symbol;Acc:HGNC:8790]
37. HSD3B2 ENSG00000203859 9 0.891 0.891 - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2 [Source:HGNC Symbol;Acc:HGNC:5218]
38. YY1P2 ENSG00000229104 5 0.884 0.884 - YY1 transcription factor pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:45095]
39. LINC01363 ENSG00000231605 7 0.839 0.839 - long intergenic non-protein coding RNA 1363 [Source:HGNC Symbol;Acc:HGNC:50598]
40. C1QTNF9 ENSG00000240654 7 0.822 0.822 - C1q and TNF related 9 [Source:HGNC Symbol;Acc:HGNC:28732]
41. CYP2C9 ENSG00000138109 4 0.809 0.809 - cytochrome P450 family 2 subfamily C member 9 [Source:HGNC Symbol;Acc:HGNC:2623]
42. LOC101927839 4 0.805 - 0.805 uncharacterized LOC101927839
43. LINC01070 ENSG00000260102, ENSG00000282647 4 0.805 - 0.805 long intergenic non-protein coding RNA 1070 [Source:HGNC Symbol;Acc:HGNC:49110]
44. LOC101928168 4 0.804 0.804 - uncharacterized LOC101928168
45. PLA2G1B ENSG00000170890 36 0.804 0.804 - phospholipase A2 group IB [Source:HGNC Symbol;Acc:HGNC:9030]
46. LOC101929384 10 0.798 - 0.798 uncharacterized LOC101929384
47. CASC11 ENSG00000249375 8 0.796 - 0.796 cancer susceptibility 11 [Source:HGNC Symbol;Acc:HGNC:48939]
48. MS4A12 ENSG00000071203 5 0.787 - 0.787 membrane spanning 4-domains A12 [Source:HGNC Symbol;Acc:HGNC:13370]
49. CLSTN2-AS1 ENSG00000250433 6 0.781 - 0.781 CLSTN2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:49095]
50. LOC100289580 12 0.778 - 0.778 uncharacterized LOC100289580
51. TEX19 ENSG00000182459 13 0.778 - 0.778 testis expressed 19 [Source:HGNC Symbol;Acc:HGNC:33802]
52. LDHC ENSG00000166796 11 0.772 - 0.772 lactate dehydrogenase C [Source:HGNC Symbol;Acc:HGNC:6544]
53. RBM14-RBM4 ENSG00000248643 8 0.767 - 0.767 RBM14-RBM4 readthrough [Source:HGNC Symbol;Acc:HGNC:38840]
54. RNF217-AS1 ENSG00000236548 20 0.766 0.766 - RNF217 antisense RNA 1 (head to head) [Source:HGNC Symbol;Acc:HGNC:50866]
55. TSPAN8 ENSG00000127324 35 0.766 0.766 - tetraspanin 8 [Source:HGNC Symbol;Acc:HGNC:11855]
56. LOC100147773 8 0.76 - 0.760 uncharacterized LOC100147773
57. TRPV6 ENSG00000165125, ENSG00000276971 10 0.759 - 0.759 transient receptor potential cation channel subfamily V member 6 [Source:HGNC Symbol;Acc:HGNC:14006]
58. LINC00639 ENSG00000259070 8 0.758 - 0.758 long intergenic non-protein coding RNA 639 [Source:HGNC Symbol;Acc:HGNC:27502]
59. CD300LG ENSG00000161649 103 0.75 - 0.750 CD300 molecule like family member g [Source:HGNC Symbol;Acc:HGNC:30455]
60. ATP10A ENSG00000206190 53 0.75 - 0.750 ATPase phospholipid transporting 10A (putative) [Source:HGNC Symbol;Acc:HGNC:13542]
61. SHANK2-AS1 ENSG00000226627 88 0.749 - 0.749 SHANK2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40014]
62. FAM196B 11 0.741 - 0.741 family with sequence similarity 196 member B, transcript variant X2
63. ROM1 ENSG00000149489 18 0.729 0.729 - retinal outer segment membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:10254]
64. STXBP5-AS1 ENSG00000233452 28 0.725 - 0.725 STXBP5 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44183]
65. NBPF8 ENSG00000270231 18 0.724 - 0.724 NBPF member 8 [Source:HGNC Symbol;Acc:HGNC:31990]
66. SYNDIG1L ENSG00000183379 10 0.724 0.724 - synapse differentiation inducing 1 like [Source:HGNC Symbol;Acc:HGNC:32388]
67. ZNF497 ENSG00000174586 90 0.722 - 0.722 zinc finger protein 497 [Source:HGNC Symbol;Acc:HGNC:23714]
68. PI15 ENSG00000137558 20 0.719 - 0.719 peptidase inhibitor 15 [Source:HGNC Symbol;Acc:HGNC:8946]
69. SLC12A8 ENSG00000221955 79 0.717 - 0.717 solute carrier family 12 member 8 [Source:HGNC Symbol;Acc:HGNC:15595]
70. LOC643355 14 0.716 - 0.716 uncharacterized LOC643355, transcript variant X1
71. LOC341056 20 0.715 - 0.715 SUMO1 activating enzyme subunit 1 pseudogene
72. KDF1 ENSG00000175707 44 0.711 0.711 - keratinocyte differentiation factor 1 [Source:HGNC Symbol;Acc:HGNC:26624]
73. CCDC42B CCDC42B 9 0.71 - 0.710
74. HSPB3 ENSG00000169271 30 0.707 - 0.707 heat shock protein family B (small) member 3 [Source:HGNC Symbol;Acc:HGNC:5248]
75. C2orf88 ENSG00000187699 121 0.7 - 0.700 chromosome 2 open reading frame 88 [Source:HGNC Symbol;Acc:HGNC:28191]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA