Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LINC00601

Gene Name Gene ID Reads Annotation
LINC00601 ENSG00000235180 2 long intergenic non-protein coding RNA 601 [Source:HGNC Symbol;Acc:HGNC:43916]



Genes with expression patterns similar to LINC00601

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LINC00601 ENSG00000235180 2 2 1.000 1.000 long intergenic non-protein coding RNA 601 [Source:HGNC Symbol;Acc:HGNC:43916]
2. HMMR-AS1 ENSG00000251018 2 1 1.000 - HMMR antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:49149]
3. VSTM2B ENSG00000187135 2 1 1.000 - V-set and transmembrane domain containing 2B [Source:HGNC Symbol;Acc:HGNC:33595]
4. ROPN1 ENSG00000065371 3 1 1.000 - rhophilin associated tail protein 1 [Source:HGNC Symbol;Acc:HGNC:17692]
5. LINC00381 ENSG00000226240 3 1 - 1.000 long intergenic non-protein coding RNA 381 [Source:HGNC Symbol;Acc:HGNC:42708]
6. LINC01232 ENSG00000280734 3 1 1.000 - long intergenic non-protein coding RNA 1232 [Source:HGNC Symbol;Acc:HGNC:49755]
7. TRIM53AP ENSG00000225581 4 1 - 1.000 tripartite motif containing 53A, pseudogene [Source:HGNC Symbol;Acc:HGNC:19025]
8. LINC01482 ENSG00000267659 1 1 1.000 - long intergenic non-protein coding RNA 1482 [Source:HGNC Symbol;Acc:HGNC:51128]
9. HAPLN2 ENSG00000132702 1 1 1.000 - hyaluronan and proteoglycan link protein 2 [Source:HGNC Symbol;Acc:HGNC:17410]
10. RAD51AP2 ENSG00000214842 6 1 1.000 - RAD51 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:34417]
11. KCNS2 ENSG00000156486 1 1 1.000 - potassium voltage-gated channel modifier subfamily S member 2 [Source:HGNC Symbol;Acc:HGNC:6301]
12. SCGB1A1 ENSG00000149021 3 1 - 1.000 secretoglobin family 1A member 1 [Source:HGNC Symbol;Acc:HGNC:12523]
13. LOC151121 2 1 1.000 - uncharacterized LOC151121, transcript variant 3
14. CCDC87 ENSG00000182791 3 1 1.000 - coiled-coil domain containing 87 [Source:HGNC Symbol;Acc:HGNC:25579]
15. CCDC169-SOHLH2 ENSG00000250709 1 1 - 1.000 CCDC169-SOHLH2 readthrough [Source:HGNC Symbol;Acc:HGNC:38866]
16. LOC401052 4 1 1.000 - uncharacterized LOC401052
17. SIT1 ENSG00000137078 12 1 1.000 - signaling threshold regulating transmembrane adaptor 1 [Source:HGNC Symbol;Acc:HGNC:17710]
18. LOC100500773 8 1 1.000 - serine/arginine-rich splicing factor 3 pseudogene
19. IGSF23 ENSG00000216588 1 1 - 1.000 immunoglobulin superfamily member 23 [Source:HGNC Symbol;Acc:HGNC:40040]
20. GK2 ENSG00000196475 1 1 1.000 - glycerol kinase 2 [Source:HGNC Symbol;Acc:HGNC:4291]
21. LINC00607 ENSG00000235770 7 1 1.000 - long intergenic non-protein coding RNA 607 [Source:HGNC Symbol;Acc:HGNC:43944]
22. LOC100287225 1 1 1.000 - uncharacterized LOC100287225, transcript variant 2
23. LOC100129617 4 1 1.000 - uncharacterized LOC100129617
24. CPA6 ENSG00000165078 8 1 - 1.000 carboxypeptidase A6 [Source:HGNC Symbol;Acc:HGNC:17245]
25. DISC2 10 1 1.000 - disrupted in schizophrenia 2 (non-protein coding)
26. C1orf127 ENSG00000175262 1 1 - 1.000 chromosome 1 open reading frame 127 [Source:HGNC Symbol;Acc:HGNC:26730]
27. CA1 ENSG00000133742 2 1 1.000 - carbonic anhydrase 1 [Source:HGNC Symbol;Acc:HGNC:1368]
28. CELP ENSG00000170827 1 1 1.000 - carboxyl ester lipase pseudogene [Source:HGNC Symbol;Acc:HGNC:1849]
29. LUC7L2 ENSG00000146963 2 1 1.000 - LUC7 like 2, pre-mRNA splicing factor [Source:HGNC Symbol;Acc:HGNC:21608]
30. CCR9 ENSG00000173585 6 1 1.000 - C-C motif chemokine receptor 9 [Source:HGNC Symbol;Acc:HGNC:1610]
31. LOC101929733 7 1 1.000 - uncharacterized LOC101929733
32. LIPI ENSG00000188992 2 1 1.000 - lipase I [Source:HGNC Symbol;Acc:HGNC:18821]
33. HIST4H4 ENSG00000197837 1 0.997 - 0.997 histone cluster 4 H4 [Source:HGNC Symbol;Acc:HGNC:20510]
34. SLC35G3 ENSG00000164729 12 0.997 - 0.997 solute carrier family 35 member G3 [Source:HGNC Symbol;Acc:HGNC:26848]
35. LINC01440 ENSG00000235166 1 0.996 - 0.996 long intergenic non-protein coding RNA 1440 [Source:HGNC Symbol;Acc:HGNC:50762]
36. ANKRD30BP3 ENSG00000230501, ENSG00000275985 5 0.993 - 0.993 ankyrin repeat domain 30B pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:27873]
37. KIAA0408 ENSG00000189367 1 0.954 - 0.954 KIAA0408 [Source:HGNC Symbol;Acc:HGNC:21636]
38. PRNT ENSG00000180259 2 0.91 - 0.910 prion locus lncRNA, testis expressed [Source:HGNC Symbol;Acc:HGNC:18046]
39. PRDM14 ENSG00000147596 2 0.91 - 0.910 PR/SET domain 14 [Source:HGNC Symbol;Acc:HGNC:14001]
40. PPIAP30 ENSG00000206448 11 0.907 - 0.907 peptidylprolyl isomerase A pseudogene 30 [Source:HGNC Symbol;Acc:HGNC:44878]
41. FSCN2 ENSG00000186765 2 0.9 - 0.900 fascin actin-bundling protein 2, retinal [Source:HGNC Symbol;Acc:HGNC:3960]
42. PCDHGA9 ENSG00000261934 5 0.894 - 0.894 protocadherin gamma subfamily A, 9 [Source:HGNC Symbol;Acc:HGNC:8707]
43. TSSC2 ENSG00000223756 2 0.887 - 0.887 tumor suppressing subtransferable candidate 2 pseudogene [Source:HGNC Symbol;Acc:HGNC:12384]
44. SLC25A30-AS1 ENSG00000251015 8 0.873 - 0.873 SLC25A30 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:42795]
45. C15orf32 ENSG00000183643 8 0.867 - 0.867 chromosome 15 open reading frame 32 [Source:HGNC Symbol;Acc:HGNC:26549]
46. LOC103908605 2 0.861 - 0.861 uncharacterized LOC103908605
47. ASB14 ENSG00000239388 2 0.857 - 0.857 ankyrin repeat and SOCS box containing 14 [Source:HGNC Symbol;Acc:HGNC:19766]
48. NAPSB ENSG00000131401 12 0.841 0.841 - napsin B aspartic peptidase, pseudogene [Source:HGNC Symbol;Acc:HGNC:13396]
49. LOC101928551 13 0.816 - 0.816 uncharacterized LOC101928551
50. LOC101927069 16 0.808 0.808 - uncharacterized LOC101927069
51. GUSBP2 ENSG00000241549 17 0.804 - 0.804 glucuronidase, beta pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:18792]
52. DHH ENSG00000139549 9 0.796 - 0.796 desert hedgehog [Source:HGNC Symbol;Acc:HGNC:2865]
53. LOC100130476 7 0.793 - 0.793 uncharacterized LOC100130476
54. IL1A ENSG00000115008 6 0.791 - 0.791 interleukin 1 alpha [Source:HGNC Symbol;Acc:HGNC:5991]
55. GFAP ENSG00000131095 3 0.788 - 0.788 glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
56. MTUS2-AS1 ENSG00000179141 4 0.783 - 0.783 MTUS2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40924]
57. SIX3 ENSG00000138083 39 0.777 - 0.777 SIX homeobox 3 [Source:HGNC Symbol;Acc:HGNC:10889]
58. STUB1 ENSG00000103266 17 0.769 0.769 - STIP1 homology and U-box containing protein 1 [Source:HGNC Symbol;Acc:HGNC:11427]
59. SOX14 ENSG00000168875 15 0.756 0.756 - SRY-box 14 [Source:HGNC Symbol;Acc:HGNC:11193]
60. SLC26A4-AS1 ENSG00000233705 5 0.754 - 0.754 SLC26A4 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:22385]
61. GLIS2-AS1 ENSG00000262686, ENSG00000282703 11 0.745 - 0.745 GLIS2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51381]
62. GJD3 ENSG00000183153 11 0.733 - 0.733 gap junction protein delta 3 [Source:HGNC Symbol;Acc:HGNC:19147]
63. SLC24A2 ENSG00000155886 18 0.724 0.724 - solute carrier family 24 member 2 [Source:HGNC Symbol;Acc:HGNC:10976]
64. AQP4-AS1 ENSG00000260372 12 0.724 - 0.724 AQP4 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:26399]
65. AP2A1 ENSG00000196961 5 0.713 - 0.713 adaptor related protein complex 2 subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:561]
66. SNAPC5 ENSG00000174446 5 0.705 - 0.705 small nuclear RNA activating complex polypeptide 5 [Source:HGNC Symbol;Acc:HGNC:15484]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA