Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for LINC00559

Gene Name Gene ID Reads Annotation
LINC00559 ENSG00000261446 4 long intergenic non-protein coding RNA 559 [Source:HGNC Symbol;Acc:HGNC:43703]



Genes with expression patterns similar to LINC00559

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. LINC00559 ENSG00000261446 4 2 1.000 1.000 long intergenic non-protein coding RNA 559 [Source:HGNC Symbol;Acc:HGNC:43703]
2. EHMT1-IT1 7 1.679 0.730 0.949 EHMT1 intronic transcript 1
3. KRT81 ENSG00000205426 2 1 1.000 - keratin 81 [Source:HGNC Symbol;Acc:HGNC:6458]
4. WWTR1-AS1 ENSG00000241313 4 1 1.000 - WWTR1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:41035]
5. FAM106CP 9 1 1.000 - family with sequence similarity 106 member C, pseudogene
6. CA7 ENSG00000168748 3 1 1.000 - carbonic anhydrase 7 [Source:HGNC Symbol;Acc:HGNC:1381]
7. LOC101928401 2 1 1.000 - uncharacterized LOC101928401
8. GIPR ENSG00000010310 2 1 - 1.000 gastric inhibitory polypeptide receptor [Source:HGNC Symbol;Acc:HGNC:4271]
9. LOC101927023 2 1 1.000 - uncharacterized LOC101927023
10. GCM2 ENSG00000124827 3 1 1.000 - glial cells missing homolog 2 [Source:HGNC Symbol;Acc:HGNC:4198]
11. CHI3L2 ENSG00000064886 2 1 - 1.000 chitinase 3 like 2 [Source:HGNC Symbol;Acc:HGNC:1933]
12. GRPR ENSG00000126010 8 1 1.000 - gastrin releasing peptide receptor [Source:HGNC Symbol;Acc:HGNC:4609]
13. LINC01107 ENSG00000225493 2 1 1.000 - long intergenic non-protein coding RNA 1107 [Source:HGNC Symbol;Acc:HGNC:49229]
14. TSPAN19 ENSG00000231738 7 1 1.000 - tetraspanin 19 [Source:HGNC Symbol;Acc:HGNC:31886]
15. LYPD5 ENSG00000159871 5 1 1.000 - LY6/PLAUR domain containing 5 [Source:HGNC Symbol;Acc:HGNC:26397]
16. ZNF806 ENSG00000018607 3 1 1.000 - zinc finger protein 806 [Source:HGNC Symbol;Acc:HGNC:33228]
17. LOC100128568 5 1 1.000 - uncharacterized LOC100128568
18. M1AP ENSG00000159374 17 1 1.000 - meiosis 1 associated protein [Source:HGNC Symbol;Acc:HGNC:25183]
19. LOC100131303 2 1 1.000 - uncharacterized LOC100131303
20. CACNA1G-AS1 ENSG00000250107 7 1 1.000 - CACNA1G antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:27377]
21. C9 ENSG00000113600 14 1 1.000 - complement C9 [Source:HGNC Symbol;Acc:HGNC:1358]
22. HMHB1 ENSG00000158497 2 1 1.000 - histocompatibility minor HB-1 [Source:HGNC Symbol;Acc:HGNC:29677]
23. IGBP1P1 ENSG00000226677 4 1 1.000 - immunoglobulin (CD79A) binding protein 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:19709]
24. LGALS4 ENSG00000171747, ENSG00000282992 9 1 1.000 - galectin 4 [Source:HGNC Symbol;Acc:HGNC:6565]
25. PM20D1 ENSG00000162877 2 1 1.000 - peptidase M20 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26518]
26. LOC101927318 2 1 - 1.000 uncharacterized LOC101927318, transcript variant 3
27. B3GALT5 ENSG00000183778 3 1 1.000 - beta-1,3-galactosyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:920]
28. MKNK1-AS1 ENSG00000269956 9 1 1.000 - MKNK1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44129]
29. LOC101928794 20 1 1.000 - uncharacterized LOC101928794
30. MASP2 ENSG00000009724 4 1 1.000 - mannan binding lectin serine peptidase 2 [Source:HGNC Symbol;Acc:HGNC:6902]
31. LOC100506274 6 1 1.000 - uncharacterized LOC100506274
32. AOC4P ENSG00000260105 2 1 1.000 - amine oxidase, copper containing 4, pseudogene [Source:HGNC Symbol;Acc:HGNC:48869]
33. DYTN ENSG00000232125 3 0.999 - 0.999 dystrotelin [Source:HGNC Symbol;Acc:HGNC:23279]
34. SNORD22 ENSG00000277194 3 0.998 - 0.998 small nucleolar RNA, C/D box 22 [Source:HGNC Symbol;Acc:HGNC:10145]
35. PDZK1IP1 ENSG00000162366 16 0.974 - 0.974 PDZK1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16887]
36. MYLK2 ENSG00000101306 18 0.972 - 0.972 myosin light chain kinase 2 [Source:HGNC Symbol;Acc:HGNC:16243]
37. KRT86 ENSG00000170442 9 0.965 - 0.965 keratin 86 [Source:HGNC Symbol;Acc:HGNC:6463]
38. ARHGEF38 ENSG00000236699 12 0.965 - 0.965 Rho guanine nucleotide exchange factor 38 [Source:HGNC Symbol;Acc:HGNC:25968]
39. SPNS3 ENSG00000182557 10 0.96 - 0.960 sphingolipid transporter 3 (putative) [Source:HGNC Symbol;Acc:HGNC:28433]
40. LINC00331 ENSG00000225427 11 0.957 - 0.957 long intergenic non-protein coding RNA 331 [Source:HGNC Symbol;Acc:HGNC:42048]
41. VN1R1 ENSG00000178201 6 0.949 - 0.949 vomeronasal 1 receptor 1 [Source:HGNC Symbol;Acc:HGNC:13548]
42. LOC100506895 4 0.937 - 0.937 uncharacterized LOC100506895
43. SNORA57 ENSG00000206597 6 0.931 - 0.931 small nucleolar RNA, H/ACA box 57 [Source:HGNC Symbol;Acc:HGNC:32651]
44. LOC389033 6 0.93 - 0.930 placenta specific 9 pseudogene
45. KLRG2 ENSG00000188883 4 0.927 - 0.927 killer cell lectin like receptor G2 [Source:HGNC Symbol;Acc:HGNC:24778]
46. RASGRP4 ENSG00000171777 11 0.919 - 0.919 RAS guanyl releasing protein 4 [Source:HGNC Symbol;Acc:HGNC:18958]
47. DUSP27 ENSG00000198842 44 0.903 0.903 - dual specificity phosphatase 27, atypical [Source:HGNC Symbol;Acc:HGNC:25034]
48. LOC101927482 7 0.896 - 0.896 uncharacterized LOC101927482, transcript variant 2
49. ADRA2B ENSG00000274286 27 0.894 - 0.894 adrenoceptor alpha 2B [Source:HGNC Symbol;Acc:HGNC:282]
50. SLC17A1 ENSG00000124568 10 0.884 0.884 - solute carrier family 17 member 1 [Source:HGNC Symbol;Acc:HGNC:10929]
51. ADGRG4 ENSG00000156920 7 0.877 - 0.877 adhesion G protein-coupled receptor G4 [Source:HGNC Symbol;Acc:HGNC:18992]
52. BMX ENSG00000102010 12 0.874 - 0.874 BMX non-receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:1079]
53. KCNQ1 ENSG00000053918, ENSG00000282076 126 0.863 - 0.863 potassium voltage-gated channel subfamily Q member 1 [Source:HGNC Symbol;Acc:HGNC:6294]
54. CEACAM5 ENSG00000105388 139 0.855 - 0.855 carcinoembryonic antigen related cell adhesion molecule 5 [Source:HGNC Symbol;Acc:HGNC:1817]
55. LOC101929733 7 0.85 - 0.850 uncharacterized LOC101929733
56. CDIPT-AS1 8 0.849 - 0.849 CDIPT antisense RNA 1 (head to head), transcript variant 2
57. PRAM1 ENSG00000133246 60 0.847 - 0.847 PML-RARA regulated adaptor molecule 1 [Source:HGNC Symbol;Acc:HGNC:30091]
58. MIR155HG ENSG00000234883 33 0.842 0.842 - MIR155 host gene [Source:HGNC Symbol;Acc:HGNC:35460]
59. SLC26A7 ENSG00000147606 52 0.838 - 0.838 solute carrier family 26 member 7 [Source:HGNC Symbol;Acc:HGNC:14467]
60. RNF183 ENSG00000165188 12 0.831 - 0.831 ring finger protein 183 [Source:HGNC Symbol;Acc:HGNC:28721]
61. RASGRP2 ENSG00000068831 69 0.827 - 0.827 RAS guanyl releasing protein 2 [Source:HGNC Symbol;Acc:HGNC:9879]
62. TNFSF11 ENSG00000120659 10 0.816 - 0.816 TNF superfamily member 11 [Source:HGNC Symbol;Acc:HGNC:11926]
63. PRR15L ENSG00000167183 30 0.813 0.813 - proline rich 15 like [Source:HGNC Symbol;Acc:HGNC:28149]
64. FAM43A ENSG00000185112 777 0.812 - 0.812 family with sequence similarity 43 member A [Source:HGNC Symbol;Acc:HGNC:26888]
65. LOC104798195 LOC104798195 4 0.805 - 0.805
66. PSORS1C2 ENSG00000204538, ENSG00000206459, ENSG00000224544, ENSG00000227246, ENSG00000232127, ENSG00000234605 40 0.798 - 0.798 psoriasis susceptibility 1 candidate 2 [Source:HGNC Symbol;Acc:HGNC:17199]
67. STON1-GTF2A1L ENSG00000068781 14 0.797 - 0.797 STON1-GTF2A1L readthrough [Source:HGNC Symbol;Acc:HGNC:30651]
68. PKN2-AS1 ENSG00000237505 30 0.796 0.796 - PKN2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:50597]
69. RGP1 ENSG00000107185 22 0.793 - 0.793 RGP1 homolog, RAB6A GEF complex partner 1 [Source:HGNC Symbol;Acc:HGNC:21965]
70. NFKBID ENSG00000167604 19 0.792 - 0.792 NFKB inhibitor delta [Source:HGNC Symbol;Acc:HGNC:15671]
71. APCS ENSG00000132703 3 0.789 0.789 - amyloid P component, serum [Source:HGNC Symbol;Acc:HGNC:584]
72. CNGA1 ENSG00000198515 21 0.781 - 0.781 cyclic nucleotide gated channel alpha 1 [Source:HGNC Symbol;Acc:HGNC:2148]
73. ENTPD2 ENSG00000054179 7 0.781 0.781 - ectonucleoside triphosphate diphosphohydrolase 2 [Source:HGNC Symbol;Acc:HGNC:3364]
74. MYOCD ENSG00000141052 85 0.778 - 0.778 myocardin [Source:HGNC Symbol;Acc:HGNC:16067]
75. CFB ENSG00000204359, ENSG00000239754, ENSG00000241253, ENSG00000241534, ENSG00000242335, ENSG00000243570, ENSG00000243649 21 0.771 0.771 - complement factor B [Source:HGNC Symbol;Acc:HGNC:1037]
76. SLC17A8 ENSG00000179520 31 0.77 0.770 - solute carrier family 17 member 8 [Source:HGNC Symbol;Acc:HGNC:20151]
77. PNLDC1 ENSG00000146453 34 0.77 - 0.770 PARN like, ribonuclease domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21185]
78. LOC100506371 22 0.769 - 0.769 uncharacterized LOC100506371
79. IL1RN ENSG00000136689 26 0.769 - 0.769 interleukin 1 receptor antagonist [Source:HGNC Symbol;Acc:HGNC:6000]
80. GJA4 ENSG00000187513 350 0.769 - 0.769 gap junction protein alpha 4 [Source:HGNC Symbol;Acc:HGNC:4278]
81. SPTBN5 ENSG00000137877 14 0.765 - 0.765 spectrin beta, non-erythrocytic 5 [Source:HGNC Symbol;Acc:HGNC:15680]
82. KLRG1 ENSG00000139187 146 0.762 - 0.762 killer cell lectin like receptor G1 [Source:HGNC Symbol;Acc:HGNC:6380]
83. DTHD1 ENSG00000197057 5 0.757 - 0.757 death domain containing 1 [Source:HGNC Symbol;Acc:HGNC:37261]
84. UCN ENSG00000163794 43 0.745 - 0.745 urocortin [Source:HGNC Symbol;Acc:HGNC:12516]
85. TMEM189-UBE2V1 ENSG00000124208 9 0.745 - 0.745 TMEM189-UBE2V1 readthrough [Source:HGNC Symbol;Acc:HGNC:33521]
86. GAS2L2 ENSG00000270765 9 0.745 0.745 - growth arrest specific 2 like 2 [Source:HGNC Symbol;Acc:HGNC:24846]
87. BHLHE40-AS1 ENSG00000235831 11 0.745 0.745 - BHLHE40 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44471]
88. GLIS3-AS1 ENSG00000237009 13 0.743 0.743 - GLIS3 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:28260]
89. C2orf72 ENSG00000204128 37 0.743 0.743 - chromosome 2 open reading frame 72 [Source:HGNC Symbol;Acc:HGNC:27418]
90. PAPOLB ENSG00000218823 13 0.733 - 0.733 poly(A) polymerase beta [Source:HGNC Symbol;Acc:HGNC:15970]
91. ICOSLG ENSG00000160223 25 0.732 - 0.732 inducible T cell costimulator ligand [Source:HGNC Symbol;Acc:HGNC:17087]
92. MEDAG ENSG00000102802 109 0.729 - 0.729 mesenteric estrogen dependent adipogenesis [Source:HGNC Symbol;Acc:HGNC:25926]
93. RP1L1 ENSG00000183638, ENSG00000285131 43 0.726 - 0.726 RP1 like 1 [Source:NCBI gene;Acc:94137]
94. LOC553103 15 0.725 0.725 - uncharacterized LOC553103
95. TREM2 ENSG00000095970 31 0.723 0.723 - triggering receptor expressed on myeloid cells 2 [Source:HGNC Symbol;Acc:HGNC:17761]
96. RNF5 ENSG00000183574, ENSG00000204308, ENSG00000223767, ENSG00000225452, ENSG00000227277, ENSG00000228405, ENSG00000228907 12 0.717 0.717 - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
97. FAM71F1 ENSG00000135248 5 0.716 0.716 - family with sequence similarity 71 member F1 [Source:HGNC Symbol;Acc:HGNC:30704]
98. LOC100507506 10 0.716 0.716 - uncharacterized LOC100507506
99. TDGF1 ENSG00000241186 49 0.713 - 0.713 teratocarcinoma-derived growth factor 1 [Source:HGNC Symbol;Acc:HGNC:11701]
100. ZNF391 ENSG00000124613 25 0.709 - 0.709 zinc finger protein 391 [Source:HGNC Symbol;Acc:HGNC:18779]

There are 5 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA