Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for gga-mir-7476

Gene Name Gene ID Reads Annotation
gga-mir-7476 gga-mir-7476 20209











Genes with expression patterns similar to gga-mir-7476

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-7476 gga-mir-7476 20209 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. PTCH1 ENSGALG00000012620 4840 2.2 - - - - - - 0.706 0.742 - 0.752 patched 1 [Source:NCBI gene;Acc:395806]
3. ZFR ENSGALG00000003235 8466 1.683 - - - - - - - 0.818 - 0.865 zinc finger RNA binding protein, transcript variant X3
4. NARS ENSGALG00000040506 9506 1.646 - - - - - - - 0.800 - 0.846 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
5. EIF2B2 ENSGALG00000010301 10772 1.643 - - - - - - - 0.839 - 0.804 eukaryotic translation initiation factor 2B subunit beta [Source:NCBI gene;Acc:423359]
6. QDPR ENSGALG00000030070 6953 1.638 - - - - - - - 0.787 - 0.851 quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
7. ALDH7A1 ENSGALG00000008229 5891 1.634 - - - - - - - 0.821 - 0.813 aldehyde dehydrogenase 7 family member A1 [Source:HGNC Symbol;Acc:HGNC:877]
8. TMLHE ENSGALG00000007443 3619 1.626 - - - - - - - 0.816 - 0.810 trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
9. SLC35B1 ENSGALG00000035057 10683 1.621 - - - - - - - 0.826 - 0.795 solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
10. ZBED4 ENSGALG00000032659 5313 1.62 - - - - - - 0.741 - - 0.879 zinc finger BED-type containing 4 [Source:NCBI gene;Acc:417734]
11. TXNL1 ENSGALG00000033862 13899 1.616 - - - - - - 0.754 0.862 - - thioredoxin like 1 [Source:HGNC Symbol;Acc:HGNC:12436]
12. KMT2C 6306 1.614 - - - - - - 0.765 - - 0.849 lysine methyltransferase 2C, transcript variant X14
13. FBXO5 ENSGALG00000013607 6156 1.606 - - - - - - 0.854 - - 0.752 F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
14. HS2ST1 ENSGALG00000028423 4153 1.599 - - - - - - - 0.767 - 0.832 heparan sulfate 2-O-sulfotransferase 1 [Source:NCBI gene;Acc:395140]
15. SMC4 ENSGALG00000009553 15715 1.595 - - - - - - 0.732 - - 0.863 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
16. CRCP ENSGALG00000002587 8809 1.584 - - - - - - - 0.742 - 0.842 CGRP receptor component [Source:NCBI gene;Acc:396022]
17. PRRG1 ENSGALG00000016266 3473 1.579 - - - - - - 0.715 - - 0.864 proline rich and Gla domain 1 [Source:NCBI gene;Acc:418582]
18. TMED7 ENSGALG00000028484 21008 1.578 - - - - - - 0.774 - - 0.804 Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
19. MAN2A1 ENSGALG00000000255 4543 1.575 - - - - - - 0.711 - - 0.864 mannosidase alpha class 2A member 1 [Source:HGNC Symbol;Acc:HGNC:6824]
20. GRTP1 ENSGALG00000016828 3145 1.573 - - - - - - 0.735 - - 0.838 growth hormone regulated TBC protein 1 [Source:HGNC Symbol;Acc:HGNC:20310]
21. SEC14L1 ENSGALG00000001684 2776 1.567 - - - - - - 0.770 - - 0.797 SEC14 like lipid binding 1 [Source:HGNC Symbol;Acc:HGNC:10698]
22. TMX3 ENSGALG00000013757 6387 1.558 - - - - - - 0.796 - - 0.762 Gallus gallus thioredoxin related transmembrane protein 3 (TMX3), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001321606]
23. WDR53 ENSGALG00000006395 4938 1.552 - - - - - - 0.714 - - 0.838 WD repeat domain 53 [Source:HGNC Symbol;Acc:HGNC:28786]
24. ADIPOR2 ENSGALG00000035533 6523 1.55 - - - - - - - 0.808 - 0.742 adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
25. ASAP1 ENSGALG00000037618 2887 1.541 - - - - - - 0.765 0.776 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 [Source:HGNC Symbol;Acc:HGNC:2720]
26. BZW2 ENSGALG00000010809 29213 1.54 - - - - - - - 0.788 - 0.752 basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
27. MRPL53 ENSGALG00000037867 6100 1.539 - - - - - - 0.806 0.733 - - mitochondrial ribosomal protein L53 [Source:NCBI gene;Acc:420196]
28. UCHL3 ENSGALG00000016921 16208 1.531 - - - - - - 0.707 - - 0.824 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
29. DGCR2 ENSGALG00000005891 8405 1.524 - - - - - - 0.706 - - 0.818 DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
30. MTMR8 ENSGALG00000007590 6022 1.514 - - - - - - 0.719 - - 0.795 myotubularin related protein 8 [Source:NCBI gene;Acc:422312]
31. LOC426385 ENSGALG00000026301 2703 1.512 - - - - - - 0.761 - - 0.751 serine/threonine kinase 35-like, transcript variant X2
32. RCN1 RCN1 11758 1.511 - - - - - - 0.730 0.781 - -
33. RAB10 ENSGALG00000016535 5272 1.504 - - - - - - 0.784 - - 0.720 RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
34. FANCL ENSGALG00000030022 7423 1.495 - - - - - - 0.744 - - 0.751 FA complementation group L [Source:NCBI gene;Acc:421202]
35. CBLL1 ENSGALG00000038981 6725 1.489 - - - - - - 0.723 0.766 - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
36. ENSGALG00000028938 ENSGALG00000028938 18616 1.483 - - - - - - - 0.710 - 0.773
37. PSMC2 ENSGALG00000008236 25980 1.479 - - - - - - - 0.736 - 0.743 proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
38. EBNA1BP2 ENSGALG00000009045 17453 1.476 - - - - - - 0.751 - - 0.725 EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
39. CTSO ENSGALG00000009373 4186 1.47 - - - - - - 0.719 - - 0.751 cathepsin O [Source:NCBI gene;Acc:422410]
40. SALL4 ENSGALG00000041365 6760 1.47 - - - - - - 0.707 0.763 - - spalt like transcription factor 4 [Source:NCBI gene;Acc:769286]
41. SDF2L1 ENSGALG00000031982 6084 1.468 - - - - - - 0.752 - - 0.716 stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
42. UPF2 ENSGALG00000033772 9548 1.463 - - - - - - 0.713 - - 0.750 UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
43. AP4E1 2726 1.459 - - - - - - 0.737 0.722 - - adaptor related protein complex 4 epsilon 1 subunit, transcript variant X2
44. MED17 ENSGALG00000017218 5821 1.454 - - - - - - 0.713 0.741 - - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
45. ANKRD11 ENSGALG00000006222 12327 1.449 - - - - - - 0.713 - - 0.736 ankyrin repeat domain 11, transcript variant X2
46. PDRG1 ENSGALG00000035111 9863 1.447 - - - - - - 0.701 0.746 - - p53 and DNA damage regulated 1 [Source:HGNC Symbol;Acc:HGNC:16119]
47. NDUFA12 ENSGALG00000011325 19807 1.442 - - - - - - 0.712 0.730 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
48. SP3 ENSGALG00000031796 8997 1.434 - - - - - - 0.731 - - 0.703 Sp3 transcription factor [Source:NCBI gene;Acc:395302]
49. DNAJC3 ENSGALG00000016894 9048 1.434 - - - - - - 0.711 - - 0.723 DnaJ heat shock protein family (Hsp40) member C3 [Source:NCBI gene;Acc:418787]
50. CD99 ENSGALG00000024488 10058 1.433 - - - - - - 0.732 0.701 - - CD99 molecule (Xg blood group) [Source:NCBI gene;Acc:418662]
51. ENSGALG00000007035 ENSGALG00000007035 8473 0.887 - - - - - - - 0.887 - -
52. SF3A2 ENSGALG00000021679 12580 0.885 - - - - - - - 0.885 - - splicing factor 3a subunit 2 [Source:NCBI gene;Acc:420077]
53. BDP1 BDP1 3073 0.879 - - - - - - - - - 0.879
54. GXYLT1 ENSGALG00000009532 5682 0.877 - - - - - - - - - 0.877 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
55. RRAGC ENSGALG00000033079 4966 0.877 - - - - - - - - - 0.877 Ras related GTP binding C [Source:NCBI gene;Acc:419605]
56. PTX3 ENSGALG00000028284 2984 0.876 - - - - - - - - - 0.876 pentraxin 3 [Source:NCBI gene;Acc:548626]
57. ACADL ENSGALG00000002891 8058 0.875 - - - - - - - - - 0.875 acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:424005]
58. ARHGAP21 ENSGALG00000007721 3961 0.874 - - - - - - - - - 0.874 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
59. PWP1 ENSGALG00000012631 10536 0.874 - - - - - - - - - 0.874 PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
60. CABLES1 ENSGALG00000014998 1636 0.873 - - - - - - - - - 0.873 Cdk5 and Abl enzyme substrate 1 [Source:HGNC Symbol;Acc:HGNC:25097]
61. GORASP1 ENSGALG00000006033 4033 0.872 - - - - - - - - - 0.872 golgi reassembly stacking protein 1 [Source:NCBI gene;Acc:420426]
62. COG5 ENSGALG00000042764 4205 0.872 - - - - - - - - - 0.872 component of oligomeric golgi complex 5 [Source:NCBI gene;Acc:417704]
63. BRD1 ENSGALG00000029379 6047 0.871 - - - - - - - - - 0.871 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
64. FSTL4 ENSGALG00000031487 529 0.87 - - - - - - - - - 0.870 follistatin like 4 [Source:NCBI gene;Acc:395163]
65. SVIL ENSGALG00000007331 12032 0.87 - - - - - - - - - 0.870 supervillin [Source:HGNC Symbol;Acc:HGNC:11480]
66. PPFIA1 ENSGALG00000035774 5258 0.87 - - - - - - - - - 0.870 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
67. MRPL50 ENSGALG00000015543 11649 0.869 - - - - - - - - - 0.869 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
68. SNW1 ENSGALG00000010501 17767 0.869 - - - - - - - - - 0.869 SNW domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16696]
69. FOCAD ENSGALG00000015071 3677 0.868 - - - - - - - - - 0.868 focadhesin [Source:NCBI gene;Acc:427233]
70. PPP2R5A ENSGALG00000009828 10309 0.868 - - - - - - - 0.868 - - protein phosphatase 2 regulatory subunit B'alpha [Source:HGNC Symbol;Acc:HGNC:9309]
71. SLC30A5 ENSGALG00000014787 5573 0.867 - - - - - - - - - 0.867 solute carrier family 30 member 5 [Source:NCBI gene;Acc:427173]
72. CASKIN1 604 0.867 - - - - - - - - - 0.867 CASK interacting protein 1, transcript variant X4
73. WFDC1 ENSGALG00000005503 6152 0.866 - - - - - - - - - 0.866 WAP four-disulfide core domain 1 [Source:NCBI gene;Acc:395238]
74. ASB3 ENSGALG00000008176 5422 0.866 - - - - - - - - - 0.866 ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]
75. HNRNPD ENSGALG00000011184 10686 0.865 - - - - - - 0.865 - - - heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
76. ERCC6 ENSGALG00000006254 3452 0.865 - - - - - - - - - 0.865 ERCC excision repair 6, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:3438]
77. MIPEP ENSGALG00000017118 8666 0.865 - - - - - - - - - 0.865 mitochondrial intermediate peptidase [Source:HGNC Symbol;Acc:HGNC:7104]
78. MTSS1 ENSGALG00000041969 1312 0.864 - - - - - - - - - 0.864 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
79. MED4 ENSGALG00000016995 3309 0.864 - - - - - - - 0.864 - - mediator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:17903]
80. AGGF1 ENSGALG00000004311 3011 0.864 - - - - - - - - - 0.864 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
81. MYH1D ENSGALG00000027323 365 0.863 - - - - - - - - - 0.863 Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
82. TBC1D19 ENSGALG00000029673 1868 0.863 - - - - - - - - - 0.863 TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
83. ASAP2 ENSGALG00000016419 1393 0.863 - - - - - - - - - 0.863 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
84. N4BP2 ENSGALG00000014281 3144 0.862 - - - - - - - - - 0.862 NEDD4 binding protein 2, transcript variant X6
85. OSBPL1A ENSGALG00000015086 2702 0.862 - - - - - - - - - 0.862 oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
86. AURKA ENSGALG00000007768 793 0.862 - - - - - - - - - 0.862 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
87. CLSPN ENSGALG00000002346 2590 0.861 - - - - - - - - - 0.861 claspin [Source:NCBI gene;Acc:428223]
88. WHSC1 1712 0.861 - - - - - - - - - 0.861 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
89. KLHL7 ENSGALG00000010938 528 0.861 - - - - - - - - - 0.861 kelch like family member 7 [Source:NCBI gene;Acc:420612]
90. SSH1 ENSGALG00000004928 222 0.86 - - - - - - - - - 0.860 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
91. INTS10 ENSGALG00000010130 6320 0.86 - - - - - - - - - 0.860 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
92. ZNF106 ENSGALG00000009081 1520 0.86 - - - - - - - - - 0.860 zinc finger protein 106 [Source:HGNC Symbol;Acc:HGNC:12886]
93. FBXO38 ENSGALG00000038627 2658 0.859 - - - - - - - - - 0.859 F-box protein 38 [Source:HGNC Symbol;Acc:HGNC:28844]
94. CNTRL ENSGALG00000001513 1773 0.859 - - - - - - - - - 0.859 centriolin [Source:NCBI gene;Acc:417121]
95. ITSN2 ENSGALG00000016504 651 0.859 - - - - - - - - - 0.859 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
96. TTC19 ENSGALG00000004416 1875 0.859 - - - - - - - - - 0.859 tetratricopeptide repeat domain 19 [Source:HGNC Symbol;Acc:HGNC:26006]
97. IDS ENSGALG00000009154 1177 0.859 - - - - - - - - - 0.859 iduronate 2-sulfatase [Source:NCBI gene;Acc:422392]
98. FASTKD3 ENSGALG00000033521 1186 0.858 - - - - - - - - - 0.858 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
99. HABP4 ENSGALG00000012628 2894 0.858 - - - - - - - - - 0.858 hyaluronan binding protein 4 [Source:NCBI gene;Acc:395444]
100. FBXO21 ENSGALG00000008201 2608 0.858 - - - - - - - - - 0.858 F-box protein 21 [Source:HGNC Symbol;Acc:HGNC:13592]

There are 724 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA