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Results for gga-mir-20b

Gene Name Gene ID Reads Annotation
gga-mir-20b gga-mir-20b 7











Genes with expression patterns similar to gga-mir-20b

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. gga-mir-20b gga-mir-20b 7 3 - - 1.000 - - 1.000 - - - 1.000
2. SLC35A3 12 1.812 - - 0.839 - - 0.973 - - - - solute carrier family 35 member A3, transcript variant X7
3. RCAN2 ENSGALG00000016709 8 1.715 - - - - - 1.000 - - - 0.715 regulator of calcineurin 2 [Source:HGNC Symbol;Acc:HGNC:3041]
4. BCR ENSGALG00000006695 22 1 - - - - - 1.000 - - - - BCR, RhoGEF and GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:1014]
5. SESN2_1 ENSGALG00000005648, ENSGALG00000037603 2 1 - - - - - 1.000 - - - - sestrin 2 [Source:HGNC Symbol;Acc:HGNC:20746]
6. CERS6 ENSGALG00000010902 14 1 - - - - - 1.000 - - - - ceramide synthase 6 [Source:HGNC Symbol;Acc:HGNC:23826]
7. SLC18A2 ENSGALG00000009289 11 1 - - - - - 1.000 - - - - solute carrier family 18 member A2 [Source:HGNC Symbol;Acc:HGNC:10935]
8. MILR1 ENSGALG00000046212 7 1 - - - - - 1.000 - - - - mast cell immunoglobulin-like receptor 1, transcript variant X3
9. PLEK ENSGALG00000008756 1 1 - - - - - 1.000 - - - - pleckstrin [Source:NCBI gene;Acc:395669]
10. SLC45A2 ENSGALG00000003310 55 1 - - - - - 1.000 - - - - solute carrier family 45 member 2 [Source:NCBI gene;Acc:431665]
11. FES ENSGALG00000008340 223 1 - - - - - 1.000 - - - - FES proto-oncogene, tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3657]
12. BACH2 ENSGALG00000015605 1 1 - - - - - 1.000 - - - - BTB domain and CNC homolog 2 [Source:HGNC Symbol;Acc:HGNC:14078]
13. SNORA54 SNORA54 2 1 - - - - - 1.000 - - - -
14. SYNPO2L ENSGALG00000005207 60 1 - - - - - 1.000 - - - - synaptopodin 2 like [Source:HGNC Symbol;Acc:HGNC:23532]
15. TGFBR2 ENSGALG00000011442 3 1 - - - - - 1.000 - - - - transforming growth factor beta receptor 2 [Source:NCBI gene;Acc:396399]
16. ISOC1 ENSGALG00000000161 46 1 - - - - - 1.000 - - - - isochorismatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24254]
17. IFNA ENSGALG00000013245, ENSGALG00000025984, ENSGALG00000028305, ENSGALG00000044396, ENSGALG00000045884 3 1 - - - - - 1.000 - - - - interferon type A1/A2-like 4 [Source:NCBI gene;Acc:100857744]
18. GPR103 GPR103 18 1 - - - - - 1.000 - - - -
19. VPS37C ENSGALG00000038541 169 1 - - - - - 1.000 - - - - VPS37C, ESCRT-I subunit [Source:NCBI gene;Acc:423023]
20. TNFAIP2 ENSGALG00000011446 32 1 - - - - - 1.000 - - - - TNF alpha induced protein 2 [Source:HGNC Symbol;Acc:HGNC:11895]
21. ENSGALG00000022694 ENSGALG00000022694 1 1 - - - - - 1.000 - - - -
22. NR3C1 ENSGALG00000032992 4 1 - - - - - 1.000 - - - - nuclear receptor subfamily 3 group C member 1 [Source:NCBI gene;Acc:416343]
23. K123 ENSGALG00000041978 16 1 - - - - - 1.000 - - - - K123 protein [Source:NCBI gene;Acc:395873]
24. ENSGALG00000023589 ENSGALG00000023589 1 1 - - - - - 1.000 - - - -
25. POLR3G ENSGALG00000014650 7 1 - - - - - 1.000 - - - - RNA polymerase III subunit G, transcript variant X2
26. TAGAP ENSGALG00000013747 34 1 - - - - - 1.000 - - - - T cell activation RhoGTPase activating protein [Source:HGNC Symbol;Acc:HGNC:15669]
27. NIM1 NIM1 18 1 - - - - - 1.000 - - - -
28. C11orf87 ENSGALG00000017155 2 1 - - - - - 1.000 - - - - chromosome 11 open reading frame 87 [Source:HGNC Symbol;Acc:HGNC:33788]
29. ENSGALG00000027244 ENSGALG00000027244 0 1 - - - - - 1.000 - - - -
30. B3GALT6 ENSGALG00000001859 5 1 - - - - - 1.000 - - - - beta-1,3-galactosyltransferase 6
31. CNST ENSGALG00000010649 18 1 - - - - - 1.000 - - - - consortin, connexin sorting protein [Source:HGNC Symbol;Acc:HGNC:26486]
32. DAGLA ENSGALG00000036492 3 1 - - - - - 1.000 - - - - diacylglycerol lipase alpha [Source:HGNC Symbol;Acc:HGNC:1165]
33. CAPSL ENSGALG00000013376 22 1 - - - - - 1.000 - - - - calcyphosine like [Source:HGNC Symbol;Acc:HGNC:28375]
34. ABCD4 ENSGALG00000010229 3 1 - - - - - 1.000 - - - - ATP binding cassette subfamily D member 4 [Source:HGNC Symbol;Acc:HGNC:68]
35. SULT1B ENSGALG00000023122 7 1 - - - - - 1.000 - - - - sulfotransferase family, cytosolic, 1B [Source:NCBI gene;Acc:422661]
36. BEST3 ENSGALG00000010029 11 1 - - - - - 1.000 - - - - bestrophin 3 [Source:NCBI gene;Acc:417849]
37. DNAJC28 ENSGALG00000037414 6 1 - - - - - 1.000 - - - - DnaJ heat shock protein family (Hsp40) member C28 [Source:HGNC Symbol;Acc:HGNC:1297]
38. USP12 ENSGALG00000034708 13 1 - - - - - 1.000 - - - - ubiquitin specific peptidase 12 [Source:HGNC Symbol;Acc:HGNC:20485]
39. LRRC7 ENSGALG00000011284 13 1 - - - - - 1.000 - - - - leucine rich repeat containing 7 [Source:HGNC Symbol;Acc:HGNC:18531]
40. P2RX2 ENSGALG00000044649 1 1 - - - - - 1.000 - - - - purinergic receptor P2X 2 [Source:HGNC Symbol;Acc:HGNC:15459]
41. SNORA77 SNORA77 5 1 - - - - - 1.000 - - - -
42. GAL12 GAL12 2 1 - - - - - 1.000 - - - -
43. ALOX5AP ENSGALG00000026781 28 1 - - - - - 1.000 - - - - arachidonate 5-lipoxygenase activating protein [Source:NCBI gene;Acc:770904]
44. ABI1 ENSGALG00000007547 12 1 - - - - - 1.000 - - - - abl interactor 1 [Source:NCBI gene;Acc:420489]
45. CPXM2 ENSGALG00000009693 23 1 - - - - - - - - - 1.000 carboxypeptidase X, M14 family member 2 [Source:HGNC Symbol;Acc:HGNC:26977]
46. OPNP ENSGALG00000004924 0 1 - - - - - 1.000 - - - - opsin, pineal [Source:NCBI gene;Acc:396377]
47. CRDS2 CRDS2 22 1 - - - - - 1.000 - - - -
48. DSC1 ENSGALG00000015140 16 1 - - - - - 1.000 - - - - desmocollin 1, transcript variant X1
49. PRKCZ ENSGALG00000001270 12 1 - - - - - 1.000 - - - - protein kinase C zeta [Source:HGNC Symbol;Acc:HGNC:9412]
50. ADAM28 ENSGALG00000000357 57 1 - - - - - 1.000 - - - - ADAM metallopeptidase domain 28, transcript variant X2
51. CCL19 ENSGALG00000028256 6 1 - - - - - 1.000 - - - - C-C motif chemokine ligand 19 [Source:NCBI gene;Acc:427406]
52. FAM83B ENSGALG00000016299 17 1 - - - - - 1.000 - - - - family with sequence similarity 83 member B [Source:HGNC Symbol;Acc:HGNC:21357]
53. SLCO2A1 ENSGALG00000006471 18 1 - - - - - 1.000 - - - - solute carrier organic anion transporter family member 2A1 [Source:NCBI gene;Acc:424862]
54. ENSGALG00000003050 ENSGALG00000003050 4 1 - - - - - 1.000 - - - -
55. CCR7 ENSGALG00000035733 37 1 - - - - - 1.000 - - - - C-C motif chemokine receptor 7 [Source:NCBI gene;Acc:428315]
56. ENSGALG00000002522 ENSGALG00000002522 21 1 - - - - - 1.000 - - - -
57. ATP8B2 ENSGALG00000034501 0 1 - - - - - 1.000 - - - - ATPase phospholipid transporting 8B2 [Source:HGNC Symbol;Acc:HGNC:13534]
58. SLC11A1 ENSGALG00000011434 0 1 - - - - - 1.000 - - - - solute carrier family 11 member 1 [Source:NCBI gene;Acc:395811]
59. IGLL1 ENSGALG00000021139 1 1 - - - - - 1.000 - - - - immunoglobulin lambda-like polypeptide 1 [Source:NCBI gene;Acc:416928]
60. MEL1B MEL1B 5 1 - - - - - 1.000 - - - -
61. SGCZ ENSGALG00000013684 2 1 - - - - - 1.000 - - - - sarcoglycan zeta [Source:HGNC Symbol;Acc:HGNC:14075]
62. COG3 ENSGALG00000016980 15 1 - - - - - 1.000 - - - - component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
63. C3orf33 ENSGALG00000026293 12 1 - - - - - 1.000 - - - - chromosome 3 open reading frame 33 [Source:HGNC Symbol;Acc:HGNC:26434]
64. FAM83A ENSGALG00000041748 8 1 - - - - - 1.000 - - - - family with sequence similarity 83 member A [Source:HGNC Symbol;Acc:HGNC:28210]
65. ALPI ENSGALG00000023866 19 1 - - - - - 1.000 - - - - alkaline phosphatase, intestinal, transcript variant X2
66. CEND1 ENSGALG00000032320 0 1 - - - - - 1.000 - - - - cell cycle exit and neuronal differentiation 1 [Source:NCBI gene;Acc:770044]
67. KIRREL3 ENSGALG00000029197 5 0.974 - - - - - - - - - 0.974 kirre like nephrin family adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:23204]
68. EDN2 ENSGALG00000000667 219 0.971 - - - - - 0.971 - - - - endothelin 2 [Source:NCBI gene;Acc:419559]
69. ENSGALG00000004904 ENSGALG00000004904 237 0.97 - - - - - 0.970 - - - -
70. ENSGALG00000001720 ENSGALG00000001720 10 0.961 - - - - - 0.961 - - - -
71. SLC35D3 ENSGALG00000030545 55 0.961 - - - - - 0.961 - - - - solute carrier family 35 member D3 [Source:HGNC Symbol;Acc:HGNC:15621]
72. IPPK ENSGALG00000004684 39 0.955 - - - - - 0.955 - - - - inositol-pentakisphosphate 2-kinase [Source:NCBI gene;Acc:415951]
73. UPF3A ENSGALG00000016815 48 0.947 - - 0.947 - - - - - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20332]
74. GYLTL1B GYLTL1B 3 0.92 - - - - - 0.920 - - - -
75. OBSL1 ENSGALG00000011242 22 0.92 - - - - - 0.920 - - - - obscurin like 1 [Source:HGNC Symbol;Acc:HGNC:29092]
76. TGFBRAP1 ENSGALG00000016795 81 0.915 - - - - - 0.915 - - - - transforming growth factor beta receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16836]
77. ANKRD1 ENSGALG00000006491 691 0.914 - - - - - 0.914 - - - - ankyrin repeat domain 1 [Source:NCBI gene;Acc:378926]
78. GIT1 ENSGALG00000023703 174 0.909 - - 0.909 - - - - - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:NCBI gene;Acc:417584]
79. SERAC1 ENSGALG00000013732 24 0.906 - - 0.906 - - - - - - - serine active site containing 1 [Source:HGNC Symbol;Acc:HGNC:21061]
80. HDAC10 ENSGALG00000041251 57 0.9 - - - - - 0.900 - - - - histone deacetylase 10 [Source:HGNC Symbol;Acc:HGNC:18128]
81. TMEM255B ENSGALG00000035839 46 0.89 - - - - - 0.890 - - - - transmembrane protein 255B [Source:HGNC Symbol;Acc:HGNC:28297]
82. SLC17A6 ENSGALG00000039254 16 0.89 - - 0.890 - - - - - - - solute carrier family 17 member 6 [Source:NCBI gene;Acc:422971]
83. SYCP1 ENSGALG00000002511 13 0.889 - - 0.889 - - - - - - - synaptonemal complex protein 1 [Source:HGNC Symbol;Acc:HGNC:11487]
84. EPB41L5 ENSGALG00000011605 18 0.887 - - - - - - - - - 0.887 erythrocyte membrane protein band 4.1 like 5 [Source:HGNC Symbol;Acc:HGNC:19819]
85. ENSGALG00000012928 ENSGALG00000012928 2 0.887 - - - - - - - - - 0.887
86. CPO ENSGALG00000008516 3 0.887 - - - - - - - - - 0.887 carboxypeptidase O [Source:HGNC Symbol;Acc:HGNC:21011]
87. SIK2 ENSGALG00000036873 7 0.887 - - - - - - - - - 0.887 salt inducible kinase 2 [Source:HGNC Symbol;Acc:HGNC:21680]
88. FGL2 ENSGALG00000008306 15 0.887 - - - - - - - - - 0.887 fibrinogen like 2 [Source:NCBI gene;Acc:768821]
89. ENSGALG00000028322 ENSGALG00000028322 19 0.887 - - - - - - - - - 0.887
90. EEF1AKMT4 ENSGALG00000026332 1 0.887 - - - - - - - - - 0.887 EEF1A lysine methyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:53611]
91. GALNTL6 ENSGALG00000030588 3 0.887 - - - - - - - - - 0.887 polypeptide N-acetylgalactosaminyltransferase-like 6
92. ENSGALG00000006152 ENSGALG00000006152 2 0.887 - - - - - - - - - 0.887
93. HFM1 ENSGALG00000006091 5 0.887 - - - - - - - - - 0.887 HFM1, ATP dependent DNA helicase homolog [Source:HGNC Symbol;Acc:HGNC:20193]
94. ENSGALG00000027169 ENSGALG00000027169 2 0.887 - - - - - - - - - 0.887
95. P2RX3 ENSGALG00000040479 5 0.887 - - - - - - - - - 0.887 Gallus gallus purinergic receptor P2X 3 (P2RX3), mRNA. [Source:RefSeq mRNA;Acc:NM_001329216]
96. SERHL2 ENSGALG00000011867 2 0.887 - - - - - - - - - 0.887 serine hydrolase like 2 [Source:NCBI gene;Acc:417976]
97. IL5RA ENSGALG00000008267 7 0.887 - - - - - - - - - 0.887 interleukin 5 receptor subunit alpha [Source:NCBI gene;Acc:771801]
98. PPP4R1L 15 0.887 - - - - - - - - - 0.887 protein phosphatase 4, regulatory subunit 1-like, transcript variant X2
99. CBS ENSGALG00000016196 8 0.887 - - - - - - - - - 0.887 cystathionine-beta-synthase, transcript variant X3
100. TH ENSGALG00000029648 2 0.887 - - - - - - - - - 0.887 tyrosine hydroxylase [Source:NCBI gene;Acc:395592]

There are 161 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA