Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VRK3

Gene Name Gene ID Reads Annotation
VRK3 2010 vaccinia related kinase 3, transcript variant X3











Genes with expression patterns similar to VRK3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VRK3 2010 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 vaccinia related kinase 3, transcript variant X3
2. IARS ENSGALG00000004813 12936 1.481 - - - - - - 0.768 0.713 - - isoleucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:5330]
3. MORN4 ENSGALG00000006149 7772 1.462 - - - - - - 0.750 0.712 - - MORN repeat containing 4 [Source:NCBI gene;Acc:425290]
4. LSM6 ENSGALG00000009985 18582 0.797 - - - - - - 0.797 - - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
5. PCF11 ENSGALG00000017249 4714 0.796 - - - - - - - 0.796 - - PCF11 cleavage and polyadenylation factor subunit, transcript variant X4
6. CYB5A ENSGALG00000013708 8287 0.79 - - - - - - 0.790 - - - cytochrome b5 type A [Source:NCBI gene;Acc:414798]
7. GBE1 ENSGALG00000042771 2323 0.786 - - - - - - - 0.786 - - 1,4-alpha-glucan branching enzyme 1 [Source:HGNC Symbol;Acc:HGNC:4180]
8. MYEOV2 MYEOV2 5155 0.774 - - - - - - - 0.774 - -
9. UQCRH ENSGALG00000017380 55734 0.771 - - - - - - 0.771 - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
10. SMG1 ENSGALG00000006829 1875 0.77 - - - - - - - 0.770 - - SMG1, nonsense mediated mRNA decay associated PI3K related kinase [Source:HGNC Symbol;Acc:HGNC:30045]
11. KIF16B 4311 0.768 - - - - - - - 0.768 - - kinesin family member 16B, transcript variant X2
12. TAF1A ENSGALG00000009441 2431 0.766 - - - - - - 0.766 - - - TATA-box binding protein associated factor, RNA polymerase I subunit A [Source:NCBI gene;Acc:421338]
13. IFNGR2 ENSGALG00000032660 2634 0.765 - - - - - - - 0.765 - - interferon gamma receptor 2 [Source:NCBI gene;Acc:418502]
14. MED28 ENSGALG00000007138 7686 0.762 - - - - - - 0.762 - - - mediator complex subunit 28 [Source:HGNC Symbol;Acc:HGNC:24628]
15. NUDT14 ENSGALG00000028940 3795 0.758 - - - - - - 0.758 - - - nudix hydrolase 14 [Source:NCBI gene;Acc:423501]
16. TXNDC9 ENSGALG00000032090 6804 0.758 - - - - - - 0.758 - - - thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:24110]
17. LOC112529965 ENSGALG00000010758 5395 0.757 - - - - - - 0.757 - - - NADH-cytochrome b5 reductase-like
18. UTP14A ENSGALG00000024039 8532 0.755 - - - - - - - 0.755 - - UTP14A small subunit processome component
19. HISTH1 ENSGALG00000011747 16825 0.754 - - - - - - - 0.754 - - histone H1
20. DDX42 ENSGALG00000000581 8780 0.752 - - - - - - - 0.752 - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
21. PJA2 ENSGALG00000000264 1574 0.748 - - - - - - 0.748 - - - praja ring finger ubiquitin ligase 2, transcript variant X1
22. USP45 ENSGALG00000015478 3101 0.748 - - - - - - 0.748 - - - ubiquitin specific peptidase 45 [Source:NCBI gene;Acc:421793]
23. FOPNL ENSGALG00000006532 2922 0.747 - - - - - - 0.747 - - - FGFR1OP N-terminal like [Source:NCBI gene;Acc:416598]
24. SNRNP25 ENSGALG00000026559 2097 0.746 - - - - - - 0.746 - - - small nuclear ribonucleoprotein U11/U12 subunit 25 [Source:HGNC Symbol;Acc:HGNC:14161]
25. ENSGALG00000021487 ENSGALG00000021487 1218 0.746 - - - - - - - 0.746 - -
26. MYD88 ENSGALG00000005947 2055 0.745 - - - - - - - 0.745 - - myeloid differentiation primary response 88 [Source:NCBI gene;Acc:420420]
27. CPSF3L CPSF3L 3584 0.745 - - - - - - 0.745 - - -
28. MTBP ENSGALG00000031524 1680 0.744 - - - - - - 0.744 - - - MDM2 binding protein [Source:HGNC Symbol;Acc:HGNC:7417]
29. GLE1 ENSGALG00000004738 6483 0.743 - - - - - - - 0.743 - - GLE1, RNA export mediator [Source:HGNC Symbol;Acc:HGNC:4315]
30. PSAT1 ENSGALG00000015180 4752 0.742 - - - - - - 0.742 - - - phosphoserine aminotransferase 1 [Source:HGNC Symbol;Acc:HGNC:19129]
31. METTL11A METTL11A 11876 0.741 - - - - - - - 0.741 - -
32. NDUFAF2 ENSGALG00000027564 7302 0.741 - - - - - - 0.741 - - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
33. CLASP2 ENSGALG00000032647 1821 0.739 - - - - - - 0.739 - - - cytoplasmic linker associated protein 2 [Source:NCBI gene;Acc:420724]
34. NIPA2 ENSGALG00000016737 3792 0.738 - - - - - - - 0.738 - - NIPA magnesium transporter 2 [Source:NCBI gene;Acc:418680]
35. SLC12A9 ENSGALG00000042612 2930 0.737 - - - - - - 0.737 - - - solute carrier family 12 member 9
36. DDX28 ENSGALG00000003415 979 0.736 - - - - - - - 0.736 - - DEAD-box helicase 28
37. PEX1 ENSGALG00000009410 902 0.735 - - - - - - - 0.735 - - peroxisomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8850]
38. CCDC75 CCDC75 4865 0.734 - - - - - - 0.734 - - -
39. ATP6V0E2 ENSGALG00000020754 2648 0.734 - - - - - - 0.734 - - - ATPase H+ transporting V0 subunit e2 [Source:NCBI gene;Acc:769770]
40. ENSGALG00000028938 ENSGALG00000028938 18616 0.731 - - - - - - - 0.731 - -
41. RPAP3 ENSGALG00000009743 3380 0.731 - - - - - - - 0.731 - - RNA polymerase II associated protein 3 [Source:NCBI gene;Acc:417811]
42. ABL ABL 9532 0.73 - - - - - - 0.730 - - -
43. CCNG2 ENSGALG00000010347 9122 0.729 - - - - - - - 0.729 - - cyclin G2 [Source:HGNC Symbol;Acc:HGNC:1593]
44. GSR ENSGALG00000037781 8043 0.726 - - - - - - 0.726 - - - glutathione-disulfide reductase [Source:HGNC Symbol;Acc:HGNC:4623]
45. FANCL ENSGALG00000030022 7423 0.726 - - - - - - 0.726 - - - FA complementation group L [Source:NCBI gene;Acc:421202]
46. RMND5A ENSGALG00000015815 2903 0.725 - - - - - - 0.725 - - - required for meiotic nuclear division 5 homolog A [Source:NCBI gene;Acc:422920]
47. N4BP1 ENSGALG00000003907 1888 0.725 - - - - - - - 0.725 - - NEDD4 binding protein 1 [Source:NCBI gene;Acc:415739]
48. MRPL46 ENSGALG00000006782 5033 0.724 - - - - - - 0.724 - - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
49. DHCR24 ENSGALG00000010798 3963 0.724 - - - - - - 0.724 - - - 24-dehydrocholesterol reductase [Source:NCBI gene;Acc:424661]
50. CD276 ENSGALG00000001729 11630 0.723 - - - - - - - 0.723 - - CD276 molecule [Source:NCBI gene;Acc:415315]
51. POMP ENSGALG00000017090 5504 0.721 - - - - - - - 0.721 - - proteasome maturation protein [Source:HGNC Symbol;Acc:HGNC:20330]
52. POLDIP2 ENSGALG00000003211 11664 0.721 - - - - - - 0.721 - - - DNA polymerase delta interacting protein 2 [Source:NCBI gene;Acc:417565]
53. METTL25 1538 0.72 - - - - - - - 0.720 - - methyltransferase like 25, transcript variant X1
54. PDHB ENSGALG00000029576 12254 0.72 - - - - - - 0.720 - - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
55. UBQLN4 ENSGALG00000042214 15829 0.719 - - - - - - 0.719 - - - ubiquilin 4 [Source:NCBI gene;Acc:426353]
56. SUDS3 ENSGALG00000007393 8322 0.717 - - - - - - 0.717 - - - SDS3 homolog, SIN3A corepressor complex component [Source:NCBI gene;Acc:427713]
57. TTC27 ENSGALG00000010538 9685 0.717 - - - - - - 0.717 - - - tetratricopeptide repeat domain 27 [Source:NCBI gene;Acc:421462]
58. THAP5 ENSGALG00000009494 6540 0.716 - - - - - - 0.716 - - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
59. DBI ENSGALG00000012112 6910 0.715 - - - - - - 0.715 - - - diazepam binding inhibitor, acyl-CoA binding protein [Source:NCBI gene;Acc:395263]
60. LGALS1_1 ENSGALG00000012420 1560 0.714 - - - - - - 0.714 - - - galectin 1 [Source:NCBI gene;Acc:396491]
61. CEP97 ENSGALG00000015342 1117 0.714 - - - - - - 0.714 - - - centrosomal protein 97 [Source:HGNC Symbol;Acc:HGNC:26244]
62. STX7 ENSGALG00000034374 4695 0.714 - - - - - - 0.714 - - - syntaxin 7 [Source:NCBI gene;Acc:426930]
63. SSFA2 2288 0.713 - - - - - - - 0.713 - - sperm specific antigen 2, transcript variant X2
64. WIPI2 ENSGALG00000004557 4961 0.712 - - - - - - - 0.712 - - WD repeat domain, phosphoinositide interacting 2 [Source:NCBI gene;Acc:416481]
65. ACRC ACRC 2547 0.711 - - - - - - - 0.711 - -
66. SEMA4B ENSGALG00000008297 11202 0.711 - - - - - - - 0.711 - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
67. RSRC1 ENSGALG00000009669 5829 0.71 - - - - - - - 0.710 - - arginine and serine rich coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:24152]
68. MMS19 ENSGALG00000007572 3515 0.709 - - - - - - - 0.709 - - MMS19 homolog, cytosolic iron-sulfur assembly component [Source:HGNC Symbol;Acc:HGNC:13824]
69. ZNF622 ENSGALG00000037171 5706 0.709 - - - - - - - 0.709 - - zinc finger protein 622 [Source:NCBI gene;Acc:373921]
70. CLTCL1 ENSGALG00000041760 9351 0.709 - - - - - - 0.709 - - - clathrin, heavy chain-like 1, transcript variant X6
71. CSRP2BP CSRP2BP 4679 0.707 - - - - - - 0.707 - - -
72. TULP3 ENSGALG00000013424 2064 0.706 - - - - - - 0.706 - - - tubby like protein 3 [Source:HGNC Symbol;Acc:HGNC:12425]
73. ZMPSTE24 ENSGALG00000000855 5144 0.706 - - - - - - - 0.706 - - zinc metallopeptidase STE24 [Source:HGNC Symbol;Acc:HGNC:12877]
74. RHOT2 ENSGALG00000002497 1744 0.705 - - - - - - - 0.705 - - ras homolog family member T2 [Source:NCBI gene;Acc:427651]
75. BAG5 ENSGALG00000031062 4498 0.704 - - - - - - - 0.704 - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
76. PTPRG ENSGALG00000007177 2341 0.703 - - - - - - 0.703 - - - protein tyrosine phosphatase, receptor type G [Source:NCBI gene;Acc:374208]
77. CCDC93 ENSGALG00000012129 2405 0.703 - - - - - - 0.703 - - - coiled-coil domain containing 93 [Source:NCBI gene;Acc:424277]
78. TAF2 ENSGALG00000043193 6311 0.701 - - - - - - - 0.701 - - TATA-box binding protein associated factor 2 [Source:NCBI gene;Acc:428389]
79. ZC3H3 ENSGALG00000043265 1638 0.701 - - - - - - 0.701 - - - zinc finger CCCH-type containing 3 [Source:NCBI gene;Acc:430349]
80. CBY1 ENSGALG00000012218 3872 0.701 - - - - - - 0.701 - - - chibby family member 1, beta catenin antagonist [Source:NCBI gene;Acc:771364]
81. SFXN4 ENSGALG00000009350 3899 0.7 - - - - - - - 0.700 - - sideroflexin 4 [Source:HGNC Symbol;Acc:HGNC:16088]
82. BRP44L BRP44L 30452 0.7 - - - - - - 0.700 - - -
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA