Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VDAC3

Gene Name Gene ID Reads Annotation
VDAC3 ENSGALG00000041463 21595 voltage dependent anion channel 3, transcript variant X9











Genes with expression patterns similar to VDAC3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VDAC3 ENSGALG00000041463 21595 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 voltage dependent anion channel 3, transcript variant X9
2. TBL1X ENSGALG00000040006 28597 1.74 - - - - - - 0.901 0.839 - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
3. DDX18 ENSGALG00000012147 12463 1.694 - - 0.715 - - - 0.979 - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
4. CCT5 ENSGALG00000013041 56190 1.635 - - - - - - 0.921 0.714 - - chaperonin containing TCP1 subunit 5 [Source:NCBI gene;Acc:420930]
5. TAF12 ENSGALG00000000991 8709 0.984 - - - - - - 0.984 - - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
6. LOC407092 ENSGALG00000013809 10706 0.981 - - - - - - 0.981 - - - AD012Z, transcript variant X5
7. STAG2 ENSGALG00000008482 13629 0.981 - - - - - - 0.981 - - - stromal antigen 2 [Source:HGNC Symbol;Acc:HGNC:11355]
8. SNX17 ENSGALG00000032468 13519 0.978 - - - - - - 0.978 - - - sorting nexin 17 [Source:HGNC Symbol;Acc:HGNC:14979]
9. TMEM30A ENSGALG00000015904 8533 0.976 - - - - - - - 0.976 - - transmembrane protein 30A [Source:NCBI gene;Acc:421861]
10. SAAL1 ENSGALG00000026111 8340 0.952 - - - - - - 0.952 - - - serum amyloid A like 1
11. CHPKCI CHPKCI 36217 0.95 - - - - - - 0.950 - - -
12. MRPS15 ENSGALG00000044433 15356 0.947 - - - - - - 0.947 - - - mitochondrial ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:14504]
13. CNBP 42704 0.946 - - - - - - 0.946 - - - CCHC-type zinc finger nucleic acid binding protein, transcript variant X7
14. CDC27 ENSGALG00000000596 12014 0.946 - - - - - - 0.946 - - - cell division cycle 27 [Source:NCBI gene;Acc:419960]
15. USO1 ENSGALG00000010878 9506 0.944 - - - - - - 0.944 - - - USO1 vesicle transport factor [Source:NCBI gene;Acc:422575]
16. COMMD8 ENSGALG00000026279 13509 0.944 - - - - - - 0.944 - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
17. FHL3 ENSGALG00000035187 9753 0.943 - - - - - - 0.943 - - - four and a half LIM domains 3 [Source:HGNC Symbol;Acc:HGNC:3704]
18. GCAT ENSGALG00000012312 7906 0.943 - - - - - - 0.943 - - - glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
19. LOC424109 ENSGALG00000008738 3932 0.943 - - - - - - 0.943 - - - alpha-aspartyl dipeptidase
20. INPP5E ENSGALG00000001964 3580 0.943 - - - - - - - 0.943 - - inositol polyphosphate-5-phosphatase E [Source:HGNC Symbol;Acc:HGNC:21474]
21. GLT8D1 ENSGALG00000001642 4232 0.942 - - - - - - 0.942 - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
22. C6H10ORF32 C6H10ORF32 7694 0.942 - - - - - - 0.942 - - -
23. DIS3 ENSGALG00000016930 3696 0.942 - - - - - - 0.942 - - - DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
24. ENSGALG00000006730 ENSGALG00000006730 3695 0.941 - - - - - - 0.941 - - -
25. CDC5L ENSGALG00000016704 22893 0.94 - - - - - - 0.940 - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
26. GALNTL4 GALNTL4 3548 0.94 - - - - - - 0.940 - - -
27. gga-mir-1723 ENSGALG00000025386 6662 0.94 - - - - - - 0.940 - - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
28. MOB4 ENSGALG00000008128 10322 0.94 - - - - - - 0.940 - - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
29. MYBL2 ENSGALG00000003503 15875 0.94 - - - - - - 0.940 - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
30. MMADHC ENSGALG00000012473 9026 0.939 - - - - - - 0.939 - - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
31. SAV1 ENSGALG00000012341 3313 0.939 - - - - - - 0.939 - - - salvador family WW domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:17795]
32. ABRACL ENSGALG00000013826 19445 0.939 - - - - - - 0.939 - - - ABRA C-terminal like [Source:NCBI gene;Acc:770205]
33. SNAPIN ENSGALG00000026796 11155 0.939 - - - - - - 0.939 - - - SNAP associated protein [Source:HGNC Symbol;Acc:HGNC:17145]
34. TTF1 4214 0.938 - - - - - - 0.938 - - - transcription termination factor 1
35. APITD1 APITD1 11830 0.938 - - - - - - 0.938 - - -
36. CCDC90B ENSGALG00000037072 5088 0.938 - - - - - - 0.938 - - - coiled-coil domain containing 90B [Source:HGNC Symbol;Acc:HGNC:28108]
37. ATPAF2 ENSGALG00000004926 3393 0.938 - - - - - - 0.938 - - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:18802]
38. DNAJC10 ENSGALG00000008862 3114 0.937 - - - - - - 0.937 - - - DnaJ heat shock protein family (Hsp40) member C10 [Source:HGNC Symbol;Acc:HGNC:24637]
39. LYVE1 ENSGALG00000005643 1230 0.937 - - - - - - 0.937 - - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:NCBI gene;Acc:423038]
40. LOC425795 ENSGALG00000027696 2357 0.937 - - - - - - 0.937 - - - ectoderm-neural cortex protein 1-like, transcript variant X1
41. CRAC1A CRAC1A 5265 0.937 - - - - - - 0.937 - - -
42. LUZP2 ENSGALG00000030151 585 0.937 - - - - - - 0.937 - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
43. RPUSD4 ENSGALG00000024326 3788 0.937 - - - - - - 0.937 - - - RNA pseudouridylate synthase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25898]
44. CTNNBL1 ENSGALG00000006817 6765 0.937 - - - - - - 0.937 - - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
45. SERBP1 ENSGALG00000011229 30489 0.937 - - - - - - 0.937 - - - SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]
46. CHL1 ENSGALG00000037856 1565 0.937 - - - - - - 0.937 - - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
47. CSDE1 ENSGALG00000002139 1683 0.937 - - - - - - 0.937 - - - cold shock domain containing E1 [Source:NCBI gene;Acc:419886]
48. ZNF276 ENSGALG00000000513 2410 0.937 - - - - - - 0.937 - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
49. POLR2C ENSGALG00000001168 10703 0.936 - - - - - - 0.936 - - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
50. CCAR1 ENSGALG00000004108 13219 0.936 - - - - - - 0.936 - - - cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
51. MAPT ENSGALG00000000625 659 0.936 - - - - - - 0.936 - - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
52. LHFPL2 ENSGALG00000004437 500 0.936 - - - - - - 0.936 - - - LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]
53. PPP3CB ENSGALG00000005243 8794 0.935 - - - - - - 0.935 - - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
54. PRKG1 ENSGALG00000003805 4654 0.935 - - - - - - 0.935 - - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
55. ANLN 10479 0.935 - - - - - - 0.935 - - - anillin actin binding protein, transcript variant X2
56. PRDX4 ENSGALG00000016357 32208 0.934 - - - - - - 0.934 - - - peroxiredoxin 4 [Source:HGNC Symbol;Acc:HGNC:17169]
57. RPF1 ENSGALG00000008796 9809 0.932 - - - - - - 0.932 - - - ribosome production factor 1 homolog
58. MRPS36 ENSGALG00000014789 7584 0.932 - - - - - - 0.932 - - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
59. EPHA3 ENSGALG00000015403 9811 0.932 - - - - - - 0.932 - - - EPH receptor A3 [Source:NCBI gene;Acc:396402]
60. RNF13 ENSGALG00000010411 8749 0.932 - - - - - - 0.932 - - - ring finger protein 13 [Source:NCBI gene;Acc:396303]
61. GSDMA ENSGALG00000013495 1650 0.931 - - - - - - 0.931 - - - gasdermin A [Source:NCBI gene;Acc:426132]
62. PSMD13 ENSGALG00000043684 14720 0.931 - - - - - - 0.931 - - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
63. GDPD4 ENSGALG00000000690 824 0.931 - - - - - - 0.931 - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
64. FGD5 ENSGALG00000008546 4031 0.93 - - - - - - 0.930 - - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
65. SH3RF3 ENSGALG00000016810 2169 0.93 - - - - - - 0.930 - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
66. NOB1 ENSGALG00000000693 15442 0.929 - - - - - - 0.929 - - - NIN1 (RPN12) binding protein 1 homolog [Source:HGNC Symbol;Acc:HGNC:29540]
67. SPINT1 ENSGALG00000008469 5735 0.927 - - - - - - 0.927 - - - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
68. ACTR6 ENSGALG00000040976 31271 0.925 - - - - - - 0.925 - - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
69. POLB ENSGALG00000040828 7462 0.924 - - - - - - 0.924 - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
70. TP53INP1 ENSGALG00000041353 6890 0.924 - - - - - - 0.924 - - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
71. ENSGALG00000013825 ENSGALG00000013825 16473 0.923 - - - - - - 0.923 - - -
72. MRPS34 ENSGALG00000001792 14262 0.921 - - - - - - 0.921 - - - mitochondrial ribosomal protein S34 [Source:NCBI gene;Acc:426987]
73. MRPS26 ENSGALG00000014118 27422 0.92 - - - - - - 0.920 - - - mitochondrial ribosomal protein S26 [Source:NCBI gene;Acc:426561]
74. GPATCH2 ENSGALG00000009627 4061 0.918 - - - - - - - 0.918 - - G-patch domain containing 2 [Source:NCBI gene;Acc:421355]
75. PELI1 ENSGALG00000008837 11561 0.916 - - - - - - 0.916 - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
76. MTX2 ENSGALG00000009264 17304 0.911 - - - - - - - 0.911 - - metaxin 2 [Source:HGNC Symbol;Acc:HGNC:7506]
77. TRIB2 ENSGALG00000016457 17641 0.909 - - - - - - 0.909 - - - tribbles pseudokinase 2 [Source:NCBI gene;Acc:378919]
78. PITPNB ENSGALG00000005654 21578 0.909 - - - - - - - 0.909 - - phosphatidylinositol transfer protein beta [Source:NCBI gene;Acc:416912]
79. UBLCP1 ENSGALG00000003672 9332 0.909 - - - - - - - 0.909 - - ubiquitin like domain containing CTD phosphatase 1 [Source:NCBI gene;Acc:416237]
80. BUB3 ENSGALG00000009681 36055 0.908 - - - - - - 0.908 - - - BUB3, mitotic checkpoint protein [Source:NCBI gene;Acc:423949]
81. EZH2 ENSGALG00000043399 15881 0.906 - - - - - - 0.906 - - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]
82. ENSGALG00000000360 ENSGALG00000000360 15320 0.906 - - - - - - 0.906 - - -
83. MED1 ENSGALG00000001708 9556 0.904 - - - - - - 0.904 - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
84. KLF10 ENSGALG00000037913 3529 0.903 - - - - - - - 0.903 - - Kruppel like factor 10 [Source:HGNC Symbol;Acc:HGNC:11810]
85. SPTAN1 ENSGALG00000004719 20251 0.903 - - - - - - - 0.903 - - spectrin alpha, non-erythrocytic 1 [Source:NCBI gene;Acc:374234]
86. VATB VATB 13756 0.9 - - - - - - - 0.900 - -
87. COX20 ENSGALG00000027440 5881 0.899 - - - - - - - 0.899 - - COX20, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:421493]
88. ZDHHC6 ENSGALG00000008870 16575 0.899 - - - - - - 0.899 - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
89. HDLBP ENSGALG00000005823 24636 0.898 - - - - - - 0.898 - - - high density lipoprotein binding protein [Source:NCBI gene;Acc:395984]
90. URB1 ENSGALG00000015887 5854 0.897 - - - - - - - 0.897 - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:17344]
91. PRKRIP1 ENSGALG00000001833 5092 0.897 - - - - - - - 0.897 - - PRKR interacting protein 1 [Source:NCBI gene;Acc:417508]
92. EXOSC7 ENSGALG00000030084 8654 0.897 - - - - - - 0.897 - - - exosome component 7 [Source:NCBI gene;Acc:420704]
93. TCTN3 ENSGALG00000010517 3985 0.897 - - - - - - - 0.897 - - tectonic family member 3 [Source:NCBI gene;Acc:100857412]
94. AMOTL2 5217 0.896 - - - - - - - 0.896 - - angiomotin like 2, transcript variant X3
95. LZTFL1 ENSGALG00000033928 3493 0.896 - - - - - - - 0.896 - - leucine zipper transcription factor like 1 [Source:HGNC Symbol;Acc:HGNC:6741]
96. TLK2 ENSGALG00000000410 4690 0.896 - - - - - - - 0.896 - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
97. PUM1 ENSGALG00000042598 9392 0.896 - - - - - - - 0.896 - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
98. CDCA9 ENSGALG00000021225 2244 0.895 - - - - - - - 0.895 - - cell division cycle associated 9 [Source:NCBI gene;Acc:415745]
99. ITGA1 ENSGALG00000014891 11378 0.895 - - - - - - - 0.895 - - integrin subunit alpha 1 [Source:NCBI gene;Acc:395951]
100. VIMENTIN VIMENTIN 33105 0.895 - - - - - - - 0.895 - -

There are 124 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA