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Results for VCL

Gene Name Gene ID Reads Annotation
VCL ENSGALG00000005079 90 vinculin [Source:NCBI gene;Acc:396422]











Genes with expression patterns similar to VCL

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VCL ENSGALG00000005079 90 6 - - 1.000 1.000 1.000 1.000 - 1.000 - 1.000 vinculin [Source:NCBI gene;Acc:396422]
2. GPAM ENSGALG00000008795 18 1.493 - - 0.771 - - - - 0.722 - - glycerol-3-phosphate acyltransferase, mitochondrial [Source:HGNC Symbol;Acc:HGNC:24865]
3. CCR7 ENSGALG00000035733 37 0.81 - - - - - - - 0.810 - - C-C motif chemokine receptor 7 [Source:NCBI gene;Acc:428315]
4. RUFY3 ENSGALG00000011564 15 0.808 - - - - - 0.808 - - - - RUN and FYVE domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30285]
5. BSND ENSGALG00000043998 11 0.807 - - 0.807 - - - - - - - barttin CLCNK type accessory beta subunit [Source:HGNC Symbol;Acc:HGNC:16512]
6. MYO1E ENSGALG00000004150 40 0.801 - - 0.801 - - - - - - - myosin IE [Source:HGNC Symbol;Acc:HGNC:7599]
7. RAI1 ENSGALG00000004888 14 0.792 - - 0.792 - - - - - - - retinoic acid induced 1 [Source:HGNC Symbol;Acc:HGNC:9834]
8. UPP2 ENSGALG00000045427 44 0.77 - - - - - - - 0.770 - - uridine phosphorylase 2 [Source:HGNC Symbol;Acc:HGNC:23061]
9. SOHO-1 ENSGALG00000015599 110 0.77 - - - - - - - 0.770 - - sensory organ homeobox protein SOHo [Source:NCBI gene;Acc:396346]
10. ISLR ENSGALG00000021525 142 0.764 - - 0.764 - - - - - - - immunoglobulin superfamily containing leucine rich repeat [Source:HGNC Symbol;Acc:HGNC:6133]
11. TNNI2 ENSGALG00000006591 690 0.761 - - - - - - - 0.761 - - troponin I2, fast skeletal type [Source:NCBI gene;Acc:396386]
12. RAP1GAP RAP1GAP 10 0.759 - - 0.759 - - - - - - -
13. BCMO1 BCMO1 35 0.759 - - - - - - - 0.759 - -
14. FAM129B ENSGALG00000023872 84 0.758 - - 0.758 - - - - - - - family with sequence similarity 129 member B [Source:HGNC Symbol;Acc:HGNC:25282]
15. MYH7 ENSGALG00000035594 188 0.757 - - - - - 0.757 - - - - myosin, heavy chain 7, cardiac muscle, beta [Source:NCBI gene;Acc:395350]
16. ZBTB1 ENSGALG00000011718 27 0.757 - - 0.757 - - - - - - - zinc finger and BTB domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20259]
17. EFCAB2 ENSGALG00000028017 266 0.756 - - - - - 0.756 - - - - EF-hand calcium binding domain 2 [Source:HGNC Symbol;Acc:HGNC:28166]
18. BMPR-II BMPR-II 33 0.746 - - - - - - - 0.746 - -
19. C15orf60 C15orf60 16 0.745 - - - - - - - 0.745 - -
20. WDR86 ENSGALG00000019690 113 0.744 - - - - - - - 0.744 - - WD repeat domain 86 [Source:HGNC Symbol;Acc:HGNC:28020]
21. AAGAB ENSGALG00000007887 142 0.743 - - - - - 0.743 - - - - alpha- and gamma-adaptin binding protein [Source:NCBI gene;Acc:415553]
22. COL17A1 ENSGALG00000029617 167 0.742 - - - - - - - 0.742 - - collagen type XVII alpha 1 chain [Source:NCBI gene;Acc:396503]
23. BAALC ENSGALG00000045617 850 0.737 - - - - - - - 0.737 - - BAALC, MAP3K1 and KLF4 binding [Source:HGNC Symbol;Acc:HGNC:14333]
24. CXorf22 CXorf22 20 0.735 - - - - - - - 0.735 - -
25. ANKMY1 ENSGALG00000033920 12 0.734 - - - - - - - 0.734 - - ankyrin repeat and MYND domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20987]
26. TMEM161B ENSGALG00000010896 36 0.733 - - - - - - - - - 0.733 transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
27. ANTXRL ENSGALG00000005969 230 0.728 - - - - - - - 0.728 - - anthrax toxin receptor-like
28. HEPACAM2 ENSGALG00000009482 3 0.727 - - - - - - - 0.727 - - HEPACAM family member 2 [Source:HGNC Symbol;Acc:HGNC:27364]
29. DIXDC1 ENSGALG00000007929 67 0.727 - - - - - - - 0.727 - - DIX domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23695]
30. KIF7 ENSGALG00000006611 33 0.727 - - - - - - - 0.727 - - kinesin family member 7 [Source:HGNC Symbol;Acc:HGNC:30497]
31. R3HDML ENSGALG00000046204 145 0.727 - - - - - - - 0.727 - - R3H domain containing like [Source:HGNC Symbol;Acc:HGNC:16249]
32. LOC423752 ENSGALG00000020899 17 0.724 - - - - - - - 0.724 - - uncharacterized LOC423752, transcript variant X1
33. PABPC4 ENSGALG00000003800 199 0.722 - - - - - - - 0.722 - - poly(A) binding protein cytoplasmic 4 [Source:HGNC Symbol;Acc:HGNC:8557]
34. SLC15A1 ENSGALG00000016884 10 0.714 - - 0.714 - - - - - - - solute carrier family 15 member 1 [Source:NCBI gene;Acc:378789]
35. GJB3 ENSGALG00000028424 2 0.714 - - 0.714 - - - - - - - gap junction protein beta 3 [Source:HGNC Symbol;Acc:HGNC:4285]
36. ZNF22 ZNF22 25 0.714 - - 0.714 - - - - - - -
37. ENSGALG00000024355 ENSGALG00000024355 2 0.714 - - 0.714 - - - - - - -
38. BCORL1 ENSGALG00000003976 9 0.714 - - 0.714 - - - - - - - BCL6 corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:25657]
39. SLC4A11 ENSGALG00000016017 4 0.714 - - 0.714 - - - - - - - solute carrier family 4 member 11 [Source:HGNC Symbol;Acc:HGNC:16438]
40. ENSGALG00000027856 ENSGALG00000027856 5 0.714 - - 0.714 - - - - - - -
41. NT5E ENSGALG00000015833 5 0.714 - - 0.714 - - - - - - - 5'-nucleotidase ecto
42. RND2 ENSGALG00000002804 9 0.714 - - 0.714 - - - - - - - Rho family GTPase 2 [Source:NCBI gene;Acc:428307]
43. RIPPLY1 RIPPLY1 34 0.714 - - 0.714 - - - - - - -
44. TOM1 ENSGALG00000012552 940 0.713 - - - - 0.713 - - - - - target of myb1 membrane trafficking protein [Source:NCBI gene;Acc:396049]
45. ENSGALG00000024018 ENSGALG00000024018 37 0.712 - - - - - - - - - 0.712
46. SMIM5 ENSGALG00000002427 84 0.712 - - 0.712 - - - - - - - small integral membrane protein 5 [Source:NCBI gene;Acc:770371]
47. SOWAHC ENSGALG00000026360 23 0.711 - - 0.711 - - - - - - - sosondowah ankyrin repeat domain family member C [Source:HGNC Symbol;Acc:HGNC:26149]
48. RAB11FIP3 ENSGALG00000002666 4 0.707 - - 0.707 - - - - - - - RAB11 family interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:17224]
49. EVC2 ENSGALG00000015029 51 0.707 - - - - 0.707 - - - - - EvC ciliary complex subunit 2 [Source:NCBI gene;Acc:770095]
50. BF1 ENSGALG00000033932 18 0.703 - - 0.703 - - - - - - - MHC BF1 class I [Source:NCBI gene;Acc:693260]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA