Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USH2A_1

Gene Name Gene ID Reads Annotation
USH2A_1 ENSGALG00000009652 2 usherin, transcript variant X3











Genes with expression patterns similar to USH2A_1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. USH2A_1 ENSGALG00000009652 2 1 - - 1.000 - - - - - - - usherin, transcript variant X3
2. FAM173B ENSGALG00000013043 4 0.955 - - 0.955 - - - - - - - family with sequence similarity 173 member B [Source:HGNC Symbol;Acc:HGNC:27029]
3. GTF2E1L ENSGALG00000013600 4 0.955 - - 0.955 - - - - - - - general transcription factor IIE subunit 1-like
4. CCDC96 9 0.955 - - 0.955 - - - - - - - coiled-coil domain containing 96
5. SNORA28 SNORA28 12 0.929 - - 0.929 - - - - - - -
6. RMST_1 RMST_1 1 0.929 - - 0.929 - - - - - - -
7. FAM237A ENSGALG00000020836 21 0.929 - - 0.929 - - - - - - - family with sequence similarity 237 member A [Source:HGNC Symbol;Acc:HGNC:52388]
8. GGACT ENSGALG00000022758 1 0.929 - - 0.929 - - - - - - - gamma-glutamylamine cyclotransferase [Source:HGNC Symbol;Acc:HGNC:25100]
9. HTR1A ENSGALG00000014742 2 0.929 - - 0.929 - - - - - - - 5-hydroxytryptamine receptor 1A [Source:NCBI gene;Acc:431581]
10. RAD21L1 ENSGALG00000006186 2 0.929 - - 0.929 - - - - - - - RAD21 cohesin complex component like 1 [Source:HGNC Symbol;Acc:HGNC:16271]
11. ENSGALG00000005427 ENSGALG00000005427 4 0.929 - - 0.929 - - - - - - -
12. GREM2 ENSGALG00000010773 1 0.929 - - 0.929 - - - - - - - gremlin 2, DAN family BMP antagonist [Source:HGNC Symbol;Acc:HGNC:17655]
13. ENSGALG00000026256 ENSGALG00000026256 3 0.929 - - 0.929 - - - - - - -
14. CRCBL ENSGALG00000025881 3 0.929 - - 0.929 - - - - - - - cytokine receptor common subunit beta-like, transcript variant X3
15. ARSE ENSGALG00000016654 8 0.929 - - 0.929 - - - - - - - arylsulfatase E (chondrodysplasia punctata 1), transcript variant X2
16. PIFO ENSGALG00000023763 11 0.929 - - 0.929 - - - - - - - primary cilia formation [Source:HGNC Symbol;Acc:HGNC:27009]
17. SS2R SS2R 3 0.929 - - 0.929 - - - - - - -
18. SEMA5A ENSGALG00000028685 6 0.929 - - 0.929 - - - - - - - semaphorin 5A [Source:HGNC Symbol;Acc:HGNC:10736]
19. LOC421584 ENSGALG00000011579 8 0.929 - - 0.929 - - - - - - - solute carrier family 22 member 2-like
20. EPSTI1 ENSGALG00000016964 6 0.929 - - 0.929 - - - - - - - epithelial stromal interaction 1 [Source:HGNC Symbol;Acc:HGNC:16465]
21. SLC13A1 ENSGALG00000008874 2 0.929 - - 0.929 - - - - - - - solute carrier family 13 member 1 [Source:HGNC Symbol;Acc:HGNC:10916]
22. B-G B-G 2 0.929 - - 0.929 - - - - - - -
23. ENSGALG00000015793 ENSGALG00000015793 12 0.929 - - 0.929 - - - - - - -
24. SNORD83 SNORD83 1 0.929 - - 0.929 - - - - - - -
25. NAMA NAMA 1 0.929 - - 0.929 - - - - - - -
26. TMC2 ENSGALG00000042706 1 0.929 - - 0.929 - - - - - - - transmembrane channel like 2 [Source:NCBI gene;Acc:428456]
27. LRRIQ4 ENSGALG00000009397 1 0.929 - - 0.929 - - - - - - - leucine rich repeats and IQ motif containing 4, transcript variant X2
28. PAQR5 ENSGALG00000008077 1 0.929 - - 0.929 - - - - - - - progestin and adipoQ receptor family member 5 [Source:HGNC Symbol;Acc:HGNC:29645]
29. KLHDC10 ENSGALG00000008013 4 0.929 - - 0.929 - - - - - - - kelch domain containing 10 [Source:HGNC Symbol;Acc:HGNC:22194]
30. SHC3 ENSGALG00000010688 1 0.929 - - 0.929 - - - - - - - SHC adaptor protein 3 [Source:HGNC Symbol;Acc:HGNC:18181]
31. KCNH8 ENSGALG00000011262 1 0.929 - - 0.929 - - - - - - - potassium voltage-gated channel subfamily H member 8 [Source:HGNC Symbol;Acc:HGNC:18864]
32. SLC26A1 ENSGALG00000027423 1 0.929 - - 0.929 - - - - - - - solute carrier family 26 member 1 [Source:HGNC Symbol;Acc:HGNC:10993]
33. CA15L ENSGALG00000005896 4 0.929 - - 0.929 - - - - - - - carbonic anhydrase 15-like
34. CCDC122 ENSGALG00000016968 5 0.929 - - 0.929 - - - - - - - coiled-coil domain containing 122 [Source:HGNC Symbol;Acc:HGNC:26478]
35. TMEM233 ENSGALG00000020975 1 0.929 - - 0.929 - - - - - - - transmembrane protein 233 [Source:HGNC Symbol;Acc:HGNC:37219]
36. TH ENSGALG00000029648 2 0.929 - - 0.929 - - - - - - - tyrosine hydroxylase [Source:NCBI gene;Acc:395592]
37. ENSGALG00000023475 ENSGALG00000023475 19 0.902 - - 0.902 - - - - - - -
38. RGS19 ENSGALG00000021079 1 0.835 - - 0.835 - - - - - - - regulator of G protein signaling 19 [Source:NCBI gene;Acc:374070]
39. ENSGALG00000005148 ENSGALG00000005148 9 0.789 - - 0.789 - - - - - - -
40. CRYBG3 7 0.766 - - 0.766 - - - - - - - crystallin beta-gamma domain containing 3, transcript variant X2
41. FEM1A ENSGALG00000004168 14 0.764 - - 0.764 - - - - - - - fem-1 homolog A [Source:HGNC Symbol;Acc:HGNC:16934]
42. P2RX7 ENSGALG00000003863 7 0.756 - - 0.756 - - - - - - - purinergic receptor P2X 7 [Source:HGNC Symbol;Acc:HGNC:8537]
43. OTX2 ENSGALG00000034889 8 0.749 - - 0.749 - - - - - - - orthodenticle homeobox 2 [Source:NCBI gene;Acc:395191]
44. CPM ENSGALG00000009945 140 0.743 - - 0.743 - - - - - - - carboxypeptidase M [Source:NCBI gene;Acc:417843]
45. ENSGALG00000024064 ENSGALG00000024064 10 0.737 - - 0.737 - - - - - - -
46. HEP21 ENSGALG00000000115 117 0.737 - - 0.737 - - - - - - - hen egg protein 21 kDa [Source:NCBI gene;Acc:395192]
47. TM6SF2 ENSGALG00000029015 109 0.737 - - 0.737 - - - - - - - transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
48. PELI2 ENSGALG00000012124 7 0.737 - - 0.737 - - - - - - - pellino E3 ubiquitin protein ligase family member 2 [Source:HGNC Symbol;Acc:HGNC:8828]
49. PTH3R PTH3R 214 0.737 - - 0.737 - - - - - - -
50. SFT2D2 ENSGALG00000019228 10 0.734 - - 0.734 - - - - - - - SFT2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25140]
51. AAK1 ENSGALG00000041911 16 0.733 - - 0.733 - - - - - - - AP2 associated kinase 1 [Source:HGNC Symbol;Acc:HGNC:19679]
52. CHFR ENSGALG00000002180 17 0.731 - - 0.731 - - - - - - - checkpoint with forkhead and ring finger domains [Source:HGNC Symbol;Acc:HGNC:20455]
53. WDR27 ENSGALG00000037464 9 0.72 - - 0.720 - - - - - - - WD repeat domain 27
54. TTBK2 ENSGALG00000009176 196 0.717 - - 0.717 - - - - - - - tau tubulin kinase 2 [Source:HGNC Symbol;Acc:HGNC:19141]
55. C10orf67 15 0.712 - - 0.712 - - - - - - - chromosome 10 open reading frame 67, transcript variant X2
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA