Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRPM1

Gene Name Gene ID Reads Annotation
TRPM1 ENSGALG00000003849 5 transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]











Genes with expression patterns similar to TRPM1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRPM1 ENSGALG00000003849 5 4 - - 1.000 1.000 - 1.000 - - - 1.000 transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
2. EMID1 4 2 - - - 1.000 - - - - - 1.000 EMI domain containing 1, transcript variant X5
3. ASPR ASPR 1 2 - - - 1.000 - 1.000 - - - -
4. LRP3 ENSGALG00000004853 13 1.962 - - 0.962 1.000 - - - - - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
5. TLL2 ENSGALG00000005519 10 1.962 - - 0.962 - - 1.000 - - - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
6. PELI2 ENSGALG00000012124 7 1.892 - - - - - 0.892 - - - 1.000 pellino E3 ubiquitin protein ligase family member 2 [Source:HGNC Symbol;Acc:HGNC:8828]
7. LNP1 ENSGALG00000015287 14 1.72 - - 0.782 - - 0.938 - - - - leukemia NUP98 fusion partner 1 [Source:HGNC Symbol;Acc:HGNC:28014]
8. VT4 VT4 9 1.654 - - - 0.859 - - - - - 0.795
9. HABP2 ENSGALG00000008905 1 1 - - - - - 1.000 - - - - hyaluronan binding protein 2 [Source:NCBI gene;Acc:423898]
10. ENSGALG00000013992 ENSGALG00000013992 6 1 - - - - - 1.000 - - - -
11. IL17RA ENSGALG00000033887 0 1 - - - - - 1.000 - - - - Gallus gallus interleukin 17 receptor A (IL17RA), mRNA. [Source:RefSeq mRNA;Acc:NM_001318988]
12. NT5DC3 ENSGALG00000029746 1 1 - - - - - 1.000 - - - - 5'-nucleotidase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30826]
13. DOCK2 ENSGALG00000002080 13 1 - - - 1.000 - - - - - - dedicator of cytokinesis 2 [Source:HGNC Symbol;Acc:HGNC:2988]
14. WDR37 ENSGALG00000006749 44 1 - - - - - 1.000 - - - - WD repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:31406]
15. ENSGALG00000001478 ENSGALG00000001478 23 1 - - - 1.000 - - - - - -
16. PGAP3 ENSGALG00000022030 87 1 - - - 1.000 - - - - - - post-GPI attachment to proteins 3 [Source:HGNC Symbol;Acc:HGNC:23719]
17. ENSGALG00000028833 ENSGALG00000028833 0 1 - - - - - 1.000 - - - -
18. PASD1 ENSGALG00000009063 0 1 - - - - - 1.000 - - - - PAS domain containing repressor 1, transcript variant X4
19. HIAT1 HIAT1 447 1 - - - - - 1.000 - - - -
20. TMEM161B ENSGALG00000010896 36 1 - - - - - 1.000 - - - - transmembrane protein 161B [Source:HGNC Symbol;Acc:HGNC:28483]
21. ENSGALG00000028531 ENSGALG00000028531 2 1 - - - - - - - - - 1.000
22. AMZ1 ENSGALG00000004358 2 1 - - - - - - - - - 1.000 archaelysin family metallopeptidase 1
23. SNORD61 SNORD61 12 1 - - - - - 1.000 - - - -
24. TMEM132D ENSGALG00000002671 12 1 - - - - - 1.000 - - - - transmembrane protein 132D, transcript variant X6
25. LRMP ENSGALG00000014011 2 1 - - - - - - - - - 1.000 lymphoid restricted membrane protein [Source:HGNC Symbol;Acc:HGNC:6690]
26. CRCBL ENSGALG00000025881 3 1 - - - - - 1.000 - - - - cytokine receptor common subunit beta-like, transcript variant X3
27. CYP7B1 ENSGALG00000029435 3 1 - - - 1.000 - - - - - - cytochrome P450 family 7 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2652]
28. VPS9D1 ENSGALG00000023468 1 1 - - - - - 1.000 - - - - VPS9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:13526]
29. SNORA50 SNORA50 9 1 - - - - - - - - - 1.000
30. C12orf50 ENSGALG00000045093 9 1 - - - - - 1.000 - - - - chromosome 12 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26665]
31. CA12 ENSGALG00000003456 62 1 - - - - - 1.000 - - - - carbonic anhydrase 12 [Source:HGNC Symbol;Acc:HGNC:1371]
32. CD5 ENSGALG00000031735 3 1 - - - - - 1.000 - - - - CD5 molecule [Source:NCBI gene;Acc:395757]
33. DAPK1 ENSGALG00000012608 17 1 - - - - - 1.000 - - - - death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
34. ENSGALG00000019430 ENSGALG00000019430 32 1 - - - 1.000 - - - - - -
35. INTS3 8 1 - - - - - 1.000 - - - - integrator complex subunit 3, transcript variant X2
36. LOC422320 ENSGALG00000007703 6 1 - - - - - 1.000 - - - - ligand of Numb protein X 2-like, transcript variant X1
37. FAM46C 13 1 - - - - - 1.000 - - - - family with sequence similarity 46 member C
38. APBB1 ENSGALG00000046164 5 1 - - - - - 1.000 - - - - amyloid beta precursor protein binding family B member 1 [Source:HGNC Symbol;Acc:HGNC:581]
39. PITPNA ENSGALG00000023806, ENSGALG00000035005 8 1 - - - - - 1.000 - - - - phosphatidylinositol transfer protein alpha [Source:HGNC Symbol;Acc:HGNC:9001]
40. FAM194A 1 1 - - - 1.000 - - - - - - family with sequence similarity 194, member A, transcript variant X2
41. FAM194B FAM194B 1 1 - - - - - 1.000 - - - -
42. PGAP1 ENSGALG00000030789 3 1 - - - 1.000 - - - - - - post-GPI attachment to proteins 1, transcript variant X3
43. B4GALNT3 ENSGALG00000012988 12 1 - - 1.000 - - - - - - - beta-1,4-N-acetyl-galactosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:24137]
44. NGB ENSGALG00000010413 0 1 - - - - - 1.000 - - - - neuroglobin [Source:NCBI gene;Acc:428896]
45. FNIP1 ENSGALG00000017462 4 1 - - - - - 1.000 - - - - folliculin interacting protein 1 [Source:NCBI gene;Acc:427642]
46. gga-mir-219b ENSGALG00000018278 1 1 - - - - - 1.000 - - - - gga-mir-219b [Source:miRBase;Acc:MI0015382]
47. CYR61 ENSGALG00000008661 43 1 - - - 1.000 - - - - - - cysteine rich angiogenic inducer 61 [Source:NCBI gene;Acc:429089]
48. CABP7 ENSGALG00000040463 1 1 - - - - - - - - - 1.000 calcium binding protein 7 [Source:HGNC Symbol;Acc:HGNC:20834]
49. ONECUT3 ENSGALG00000028081 1 1 - - - - - 1.000 - - - - one cut homeobox 3 [Source:HGNC Symbol;Acc:HGNC:13399]
50. C2orf62 C2orf62 9 1 - - - 1.000 - - - - - -
51. KIAA1958 ENSGALG00000023083 1 1 - - - - - - - - - 1.000 KIAA1958 [Source:HGNC Symbol;Acc:HGNC:23427]
52. CLDN16 ENSGALG00000025821 14 1 - - - - - 1.000 - - - - claudin 16 [Source:HGNC Symbol;Acc:HGNC:2037]
53. CCDC178 6 1 - - - - - 1.000 - - - - coiled-coil domain containing 178, transcript variant X3
54. ENSGALG00000025761 ENSGALG00000025761 6 1 - - - - - - - - - 1.000
55. ALK 2 1 - - - - - 1.000 - - - - anaplastic lymphoma receptor tyrosine kinase, transcript variant X3
56. STAM2 ENSGALG00000012513 9 1 - - - - - 1.000 - - - - signal transducing adaptor molecule 2 [Source:NCBI gene;Acc:424317]
57. CDCP2 ENSGALG00000010752 4 1 - - - - - - - - - 1.000 CUB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:27297]
58. THBD ENSGALG00000044442 6 1 - - - - - 1.000 - - - - thrombomodulin
59. GRM5 ENSGALG00000017238 2 1 - - - - - 1.000 - - - - glutamate receptor, metabotropic 5 [Source:NCBI gene;Acc:373933]
60. UROS ENSGALG00000013688 10 1 - - - - - - - - - 1.000 uroporphyrinogen III synthase [Source:HGNC Symbol;Acc:HGNC:12592]
61. MEIG1 ENSGALG00000000451 12 1 - - - 1.000 - - - - - - meiosis/spermiogenesis associated 1 [Source:NCBI gene;Acc:769589]
62. PSEN2 ENSGALG00000009073 7 1 - - - - - 1.000 - - - - presenilin 2 (Alzheimer disease 4) [Source:NCBI gene;Acc:374188]
63. gga-mir-196-1 ENSGALG00000018313 2 1 - - - - - - - - - 1.000 gga-mir-196-1 [Source:miRBase;Acc:MI0001268]
64. PRIMA1 ENSGALG00000020392 13 1 - - - - - - - - - 1.000 proline rich membrane anchor 1 [Source:NCBI gene;Acc:772317]
65. SLC30A2 ENSGALG00000010375 44 1 - - - - - - - - - 1.000 solute carrier family 30 member 2 [Source:HGNC Symbol;Acc:HGNC:11013]
66. NRG3 ENSGALG00000042812 10 1 - - - - - 1.000 - - - - neuregulin 3 [Source:HGNC Symbol;Acc:HGNC:7999]
67. CASZ1 ENSGALG00000002888 2 1 - - - - - 1.000 - - - - castor zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:26002]
68. CNGA3 ENSGALG00000039826 3 1 - - - - - - - - - 1.000 cyclic nucleotide gated channel alpha 3 [Source:NCBI gene;Acc:396144]
69. 5S 5S 0 1 - - - - - 1.000 - - - -
70. SIX2 ENSGALG00000023303 2 1 - - - 1.000 - - - - - - SIX homeobox 2 [Source:NCBI gene;Acc:724086]
71. CILP ENSGALG00000007358 20 1 - - - - - - - - - 1.000 cartilage intermediate layer protein [Source:HGNC Symbol;Acc:HGNC:1980]
72. GZMA ENSGALG00000013548 22 1 - - - - - 1.000 - - - - granzyme A [Source:NCBI gene;Acc:395108]
73. GDPGP1 ENSGALG00000045045 2 1 - - - - - 1.000 - - - - GDP-D-glucose phosphorylase 1
74. IL4I1 ENSGALG00000000081 1 1 - - - - - - - - - 1.000 interleukin 4 induced 1 [Source:NCBI gene;Acc:417039]
75. NADSYN1 ENSGALG00000004153 8 1 - - - - - 1.000 - - - - NAD synthetase 1 [Source:NCBI gene;Acc:422983]
76. HINT2 ENSGALG00000027418 10 1 - - - - - - - - - 1.000 histidine triad nucleotide binding protein 2 [Source:HGNC Symbol;Acc:HGNC:18344]
77. MFHAS1 ENSGALG00000011444 7 1 - - - - - 1.000 - - - - malignant fibrous histiocytoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:16982]
78. TEX33 ENSGALG00000012490 11 1 - - - - - 1.000 - - - - testis expressed 33, transcript variant X2
79. CCDC28A ENSGALG00000013834 8 1 - - - - - 1.000 - - - - coiled-coil domain containing 28A [Source:HGNC Symbol;Acc:HGNC:21098]
80. RHOF ENSGALG00000039724 8 1 - - - 1.000 - - - - - - ras homolog family member F, filopodia associated [Source:NCBI gene;Acc:416848]
81. SEC31B ENSGALG00000005722 13 1 - - - 1.000 - - - - - - SEC31 homolog B, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:23197]
82. RAB43 ENSGALG00000005021 5 1 - - - - - 1.000 - - - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
83. MILR1 ENSGALG00000046212 7 1 - - - - - - - - - 1.000 mast cell immunoglobulin-like receptor 1, transcript variant X3
84. ANPEP ENSGALG00000027501 234 1 - - - 1.000 - - - - - - alanyl aminopeptidase, membrane [Source:NCBI gene;Acc:395667]
85. LRRC9 2 1 - - - - - 1.000 - - - - leucine rich repeat containing 9
86. SNX19 ENSGALG00000001425 2 1 - - - - - 1.000 - - - - sorting nexin 19 [Source:HGNC Symbol;Acc:HGNC:21532]
87. MMP9 ENSGALG00000006992 78 1 - - - - - 1.000 - - - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
88. ENSGALG00000023526 ENSGALG00000023526 10 1 - - - - - - - - - 1.000
89. NFATC3 ENSGALG00000003396 40 1 - - - - - 1.000 - - - - nuclear factor of activated T cells 3 [Source:HGNC Symbol;Acc:HGNC:7777]
90. ENSGALG00000027018 ENSGALG00000027018 12 1 - - - - - - - - - 1.000
91. QSOX1 ENSGALG00000003933 184 1 - - - - - 1.000 - - - - quiescin Q6 sulfhydryl oxidase 1 [Source:NCBI gene;Acc:373914]
92. ENSGALG00000021106 ENSGALG00000021106 35 1 - - - - - 1.000 - - - -
93. ENSGALG00000009485 ENSGALG00000009485 4 1 - - - - - 1.000 - - - -
94. RNFT2 ENSGALG00000008217 0 1 - - - - - 1.000 - - - - ring finger protein, transmembrane 2 [Source:HGNC Symbol;Acc:HGNC:25905]
95. ENSGALG00000023695 ENSGALG00000023695 2 1 - - - 1.000 - - - - - -
96. ENSGALG00000023704 ENSGALG00000023704 2 1 - - - - - - - - - 1.000
97. FRMD6 ENSGALG00000012374 1 1 - - - - - - - - - 1.000 FERM domain containing 6 [Source:HGNC Symbol;Acc:HGNC:19839]
98. FAT2 ENSGALG00000004320 4 1 - - - - - 1.000 - - - - FAT atypical cadherin 2 [Source:HGNC Symbol;Acc:HGNC:3596]
99. AIRE AIRE 3 1 - - - 1.000 - - - - - -
100. CHAT ENSGALG00000002289 26 1 - - - - - 1.000 - - - - choline O-acetyltransferase [Source:NCBI gene;Acc:395314]

There are 188 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA