Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRIM59

Gene Name Gene ID Reads Annotation
TRIM59 ENSGALG00000023571 2333 tripartite motif containing 59 [Source:NCBI gene;Acc:425013]











Genes with expression patterns similar to TRIM59

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRIM59 ENSGALG00000023571 2333 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif containing 59 [Source:NCBI gene;Acc:425013]
2. APITD1 APITD1 11830 0.81 - - - - - - - 0.810 - -
3. CRLF3 ENSGALG00000003284 6002 0.806 - - - - - - - 0.806 - - cytokine receptor like factor 3 [Source:NCBI gene;Acc:417407]
4. COQ6 ENSGALG00000010197 3283 0.798 - - - - - - - 0.798 - - coenzyme Q6, monooxygenase [Source:HGNC Symbol;Acc:HGNC:20233]
5. RNF11 ENSGALG00000010539 8617 0.793 - - - - - - - 0.793 - - ring finger protein 11 [Source:NCBI gene;Acc:424631]
6. TFB2M ENSGALG00000010651 4374 0.79 - - - - - - - 0.790 - - transcription factor B2, mitochondrial
7. CTSL2 CTSL2 7966 0.79 - - - - - - - 0.790 - -
8. DNPEP ENSGALG00000011318 10623 0.788 - - - - - - - 0.788 - - aspartyl aminopeptidase [Source:NCBI gene;Acc:424200]
9. MBD3 ENSGALG00000001101 37265 0.786 - - - - - - 0.786 - - - methyl-CpG binding domain protein 3 [Source:NCBI gene;Acc:770153]
10. YME1L1 ENSGALG00000007492 8652 0.785 - - - - - - - 0.785 - - YME1 like 1 ATPase [Source:NCBI gene;Acc:428418]
11. SYNGR2 ENSGALG00000027902 6953 0.78 - - - - - - - 0.780 - - Gallus gallus synaptogyrin 2 (SYNGR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318453]
12. CDC42BPA ENSGALG00000009158 3926 0.777 - - - - - - 0.777 - - - CDC42 binding protein kinase alpha [Source:NCBI gene;Acc:416746]
13. TBC1D4 ENSGALG00000016925 2961 0.776 - - - - - - - 0.776 - - TBC1 domain family member 4 [Source:HGNC Symbol;Acc:HGNC:19165]
14. HARS ENSGALG00000035080 11602 0.772 - - - - - - - 0.772 - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
15. TARDBP ENSGALG00000002906 24748 0.77 - - - - - - 0.770 - - - TAR DNA binding protein [Source:NCBI gene;Acc:419453]
16. DDX19B ENSGALG00000039967 49600 0.765 - - - - - - 0.765 - - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
17. CLK1 ENSGALG00000028438 3550 0.757 - - - - - - 0.757 - - - CDC like kinase 1 [Source:HGNC Symbol;Acc:HGNC:2068]
18. MSL3 ENSGALG00000041433 2957 0.756 - - - - - - - 0.756 - - MSL complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:7370]
19. CLPTM1L ENSGALG00000013187 9733 0.754 - - - - - - - - - 0.754 CLPTM1 like [Source:NCBI gene;Acc:420973]
20. MPI ENSGALG00000029296 11781 0.752 - - - - - - - 0.752 - - mannose phosphate isomerase [Source:HGNC Symbol;Acc:HGNC:7216]
21. PAPSS1 ENSGALG00000010542 5631 0.752 - - - - - - 0.752 - - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]
22. EPFIP1L ENSGALG00000007683 18050 0.752 - - - - - - 0.752 - - - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
23. TPRG1L ENSGALG00000001024 9809 0.747 - - - - - - 0.747 - - - tumor protein p63 regulated 1 like [Source:HGNC Symbol;Acc:HGNC:27007]
24. MYC ENSGALG00000033631 16949 0.745 - - - - - - 0.745 - - - MYC proto-oncogene, bHLH transcription factor [Source:NCBI gene;Acc:420332]
25. PSMF1 ENSGALG00000000259 5782 0.743 - - - - - - - 0.743 - - proteasome inhibitor subunit 1 [Source:NCBI gene;Acc:430115]
26. CUL2 ENSGALG00000007095 9493 0.74 - - - - - - 0.740 - - - cullin 2 [Source:NCBI gene;Acc:420467]
27. ECHS1 ENSGALG00000024271 9364 0.738 - - - - - - 0.738 - - - enoyl-CoA hydratase, short chain 1 [Source:NCBI gene;Acc:770828]
28. GNAI2 ENSGALG00000035645 9535 0.737 - - - - - - 0.737 - - - G protein subunit alpha i2 [Source:HGNC Symbol;Acc:HGNC:4385]
29. HMGCS1 ENSGALG00000014862 2846 0.737 - - - - - - 0.737 - - - 3-hydroxy-3-methylglutaryl-CoA synthase 1 [Source:NCBI gene;Acc:396379]
30. PIK3IP1 ENSGALG00000006942 8388 0.735 - - - - - - 0.735 - - - phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
31. LGR4 ENSGALG00000040834 5529 0.735 - - - - - - 0.735 - - - leucine rich repeat containing G protein-coupled receptor 4 [Source:HGNC Symbol;Acc:HGNC:13299]
32. DDX42 ENSGALG00000000581 8780 0.734 - - - - - - - 0.734 - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
33. NEK6 ENSGALG00000001118 20333 0.734 - - - - - - 0.734 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
34. ZNF76 ENSGALG00000002630 1625 0.732 - - - - - - - 0.732 - - zinc finger protein 76 [Source:HGNC Symbol;Acc:HGNC:13149]
35. YIPF5 ENSGALG00000007404 5598 0.732 - - - - - - - 0.732 - - Yip1 domain family member 5 [Source:NCBI gene;Acc:416344]
36. PPFIBP1 ENSGALG00000014106 9864 0.732 - - - - - - 0.732 - - - PPFIA binding protein 1 [Source:NCBI gene;Acc:418219]
37. UROD ENSGALG00000010219 5810 0.73 - - - - - - - 0.730 - - uroporphyrinogen decarboxylase, transcript variant X2
38. Sep-09 Sep-09 4723 0.729 - - - - - - - 0.729 - -
39. SFXN3 ENSGALG00000023621 2957 0.727 - - - - - - - 0.727 - - sideroflexin 3 [Source:HGNC Symbol;Acc:HGNC:16087]
40. PHACTR4 ENSGALG00000042485 3523 0.726 - - - - - - - 0.726 - - phosphatase and actin regulator 4 [Source:HGNC Symbol;Acc:HGNC:25793]
41. TIA1 ENSGALG00000013879 16330 0.726 - - - - - - 0.726 - - - TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:771327]
42. ASUN ASUN 17129 0.724 - - - - - - 0.724 - - -
43. BNIP3L ENSGALG00000043405 10316 0.724 - - - - - - 0.724 - - - BCL2 interacting protein 3 like [Source:NCBI gene;Acc:419522]
44. UBR7 ENSGALG00000010842 16488 0.724 - - - - - - - - - 0.724 Gallus gallus ubiquitin protein ligase E3 component n-recognin 7 (putative) (UBR7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318461]
45. C1orf198 ENSGALG00000026600 5651 0.724 - - - - - - - 0.724 - - chromosome 1 open reading frame 198 [Source:HGNC Symbol;Acc:HGNC:25900]
46. ATP2B1 ENSGALG00000030550 15123 0.724 - - - - - - 0.724 - - - ATPase plasma membrane Ca2+ transporting 1 [Source:NCBI gene;Acc:374244]
47. SEC62 ENSGALG00000009379 15745 0.723 - - - - - - - 0.723 - - SEC62 homolog, preprotein translocation factor [Source:NCBI gene;Acc:424993]
48. ILF2 ENSGALG00000011570 23050 0.723 - - - - - - 0.723 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
49. COL18A1 ENSGALG00000038311 11934 0.722 - - - - - - - 0.722 - - collagen type XVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2195]
50. SH3BGRL ENSGALG00000007128 18708 0.721 - - - - - - - 0.721 - - SH3 domain binding glutamate rich protein like [Source:NCBI gene;Acc:422277]
51. MED27 ENSGALG00000003683 6808 0.721 - - - - - - 0.721 - - - mediator complex subunit 27 [Source:NCBI gene;Acc:417172]
52. PRDX6 ENSGALG00000003053 17928 0.72 - - - - - - - 0.720 - - peroxiredoxin 6 [Source:NCBI gene;Acc:429062]
53. TMED3 ENSGALG00000008272 2838 0.72 - - - - - - - 0.720 - - transmembrane p24 trafficking protein 3 [Source:NCBI gene;Acc:415580]
54. NSMAF ENSGALG00000038838 2221 0.72 - - - - - - 0.720 - - - neutral sphingomyelinase activation associated factor [Source:HGNC Symbol;Acc:HGNC:8017]
55. VIMENTIN VIMENTIN 33105 0.719 - - - - - - 0.719 - - -
56. MTA1 ENSGALG00000002803 11572 0.719 - - - - - - 0.719 - - - metastasis associated 1 [Source:NCBI gene;Acc:429060]
57. FXYD6 ENSGALG00000025937 4073 0.719 - - - - - - - 0.719 - - FXYD domain containing ion transport regulator 6 [Source:NCBI gene;Acc:770406]
58. TBC1D22A ENSGALG00000043058 1614 0.716 - - - - - - 0.716 - - - TBC1 domain family member 22A [Source:NCBI gene;Acc:428128]
59. UBE2D1 ENSGALG00000021213 5876 0.716 - - - - - - 0.716 - - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
60. PEX16 ENSGALG00000008421 3684 0.715 - - - - - - - 0.715 - - peroxisomal biogenesis factor 16 [Source:HGNC Symbol;Acc:HGNC:8857]
61. C12H3ORF37 C12H3ORF37 6362 0.714 - - - - - - - 0.714 - -
62. ENSGALG00000001398 ENSGALG00000001398 3248 0.714 - - - - - - - 0.714 - -
63. ZRANB1 ENSGALG00000031474 3909 0.714 - - - - - - - 0.714 - - zinc finger RANBP2-type containing 1 [Source:HGNC Symbol;Acc:HGNC:18224]
64. FAM96B 14435 0.714 - - - - - - - - - 0.714 family with sequence similarity 96 member B
65. TRIM8 ENSGALG00000036785 5304 0.714 - - - - - - 0.714 - - - tripartite motif containing 8 [Source:NCBI gene;Acc:423864]
66. CREG2 ENSGALG00000040947 1279 0.713 - - - - - - - - - 0.713 cellular repressor of E1A stimulated genes 2 [Source:HGNC Symbol;Acc:HGNC:14272]
67. TTF2 ENSGALG00000015249 392 0.713 - - - - - - - - 0.713 - transcription termination factor 2
68. RUVBL1 ENSGALG00000005931 9379 0.713 - - - - - - 0.713 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
69. APP ENSGALG00000015770 9438 0.713 - - - - - - - 0.713 - - amyloid beta (A4) precursor protein [Source:NCBI gene;Acc:374198]
70. FAM207A ENSGALG00000007513 8748 0.713 - - - - - - - 0.713 - - family with sequence similarity 207 member A [Source:HGNC Symbol;Acc:HGNC:15811]
71. SUV420H1 SUV420H1 2361 0.712 - - - - - - 0.712 - - -
72. TTYH3 ENSGALG00000004310 7422 0.712 - - - - - - - 0.712 - - tweety family member 3 [Source:HGNC Symbol;Acc:HGNC:22222]
73. CHMP6 ENSGALG00000026428 18026 0.712 - - - - - - 0.712 - - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
74. API5 ENSGALG00000037968 18265 0.711 - - - - - - 0.711 - - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
75. PPP1R2 ENSGALG00000029789 11594 0.71 - - - - - - 0.710 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
76. MED19 ENSGALG00000007341 4913 0.71 - - - - - - 0.710 - - - mediator complex subunit 19 [Source:HGNC Symbol;Acc:HGNC:29600]
77. LRP12 ENSGALG00000033630 2534 0.71 - - - - - - - 0.710 - - LDL receptor related protein 12 [Source:HGNC Symbol;Acc:HGNC:31708]
78. MTERFD1 MTERFD1 3640 0.709 - - - - - - 0.709 - - -
79. SEMA4B ENSGALG00000008297 11202 0.707 - - - - - - - 0.707 - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
80. UBL3 ENSGALG00000017084 7417 0.707 - - - - - - 0.707 - - - ubiquitin like 3 [Source:NCBI gene;Acc:418921]
81. POGLUT1 ENSGALG00000015480 12290 0.707 - - - - - - 0.707 - - - protein O-glucosyltransferase 1 [Source:NCBI gene;Acc:418455]
82. PTRHD1 ENSGALG00000016610 3636 0.705 - - - - - - - 0.705 - - peptidyl-tRNA hydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33782]
83. TMEM183A ENSGALG00000000223 6915 0.705 - - - - - - 0.705 - - - transmembrane protein 183A [Source:NCBI gene;Acc:421156]
84. TULP3 ENSGALG00000013424 2064 0.704 - - - - - - - 0.704 - - tubby like protein 3 [Source:HGNC Symbol;Acc:HGNC:12425]
85. MPPED1 ENSGALG00000014186 5726 0.704 - - - - - - - 0.704 - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
86. UBE2H ENSGALG00000031975 12964 0.704 - - - - - - 0.704 - - - ubiquitin conjugating enzyme E2 H [Source:NCBI gene;Acc:416678]
87. LSAMP ENSGALG00000040620 2226 0.703 - - - - - - 0.703 - - - limbic system-associated membrane protein [Source:NCBI gene;Acc:395687]
88. C15orf40 C15orf40 3212 0.703 - - - - - - 0.703 - - -
89. C4orf27 C4orf27 16724 0.703 - - - - - - - 0.703 - -
90. DHRS7B ENSGALG00000004759 2193 0.703 - - - - - - 0.703 - - - dehydrogenase/reductase 7B [Source:HGNC Symbol;Acc:HGNC:24547]
91. CDC42BPB ENSGALG00000011432 8220 0.702 - - - - - - 0.702 - - - CDC42 binding protein kinase beta [Source:HGNC Symbol;Acc:HGNC:1738]
92. TBCD ENSGALG00000001503 7880 0.702 - - - - - - 0.702 - - - tubulin folding cofactor D [Source:NCBI gene;Acc:417334]
93. SWIP-1 SWIP-1 6024 0.702 - - - - - - 0.702 - - -
94. CHST2 ENSGALG00000034507 6172 0.701 - - - - - - 0.701 - - - carbohydrate sulfotransferase 2 [Source:HGNC Symbol;Acc:HGNC:1970]
95. DHX35 ENSGALG00000003658 1090 0.701 - - - - - - - 0.701 - - DEAH-box helicase 35 [Source:HGNC Symbol;Acc:HGNC:15861]
96. METAP2 ENSGALG00000011377 16311 0.701 - - - - - - 0.701 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
97. ACAP2 ENSGALG00000007040 4182 0.7 - - - - - - 0.700 - - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:NCBI gene;Acc:424895]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA