Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TRAF1

Gene Name Gene ID Reads Annotation
TRAF1 ENSGALG00000001583 3 TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]











Genes with expression patterns similar to TRAF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TRAF1 ENSGALG00000001583 3 4 - - - - - 1.000 1.000 1.000 - 1.000 TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
2. ENSGALG00000016393 ENSGALG00000016393 3 2 - - - - - - - 1.000 - 1.000
3. ENSGALG00000029127 ENSGALG00000029127 2 2 - - - - - - - 1.000 - 1.000
4. COG3 ENSGALG00000016980 15 2 - - - - - - - 1.000 - 1.000 component of oligomeric golgi complex 3 [Source:HGNC Symbol;Acc:HGNC:18619]
5. PBEF1 PBEF1 25 2 - - - - - - - 1.000 - 1.000
6. CREB3 ENSGALG00000002523 23 2 - - - - - 1.000 - 1.000 - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
7. RAB4A ENSGALG00000036218 20 2 - - - - - 1.000 - - - 1.000 RAB4A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9781]
8. SCG5 ENSGALG00000009725 10 1.981 - - - - - 0.981 - 1.000 - - secretogranin V [Source:NCBI gene;Acc:769742]
9. UNCX ENSGALG00000039292 165 1.971 - - - - - 0.971 - 1.000 - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
10. SNORA44 SNORA44 29 1.937 - - - - - - - 1.000 - 0.937
11. OLIG3 ENSGALG00000013862 51 1.924 - - - - - 1.000 0.924 - - - oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
12. CCDC181 ENSGALG00000015221 10 1.913 - - - - - - - 1.000 - 0.913 coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]
13. B3GNTL1 ENSGALG00000001433 22 1 - - - - - - - 1.000 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
14. ENSGALG00000019324 ENSGALG00000019324 0 1 - - - - - - - 1.000 - -
15. FUK ENSGALG00000002648 9 1 - - - - - - - - - 1.000 fucokinase [Source:HGNC Symbol;Acc:HGNC:29500]
16. ENSGALG00000021472 ENSGALG00000021472 2 1 - - - - - - 1.000 - - -
17. TRPC7 ENSGALG00000006297 1 1 - - - - - - - - - 1.000 transient receptor potential cation channel subfamily C member 7 [Source:HGNC Symbol;Acc:HGNC:20754]
18. CLDN19 ENSGALG00000023580 1 1 - - - - - 1.000 - - - - claudin 19 [Source:HGNC Symbol;Acc:HGNC:2040]
19. SLC6A4 ENSGALG00000004246 5 1 - - - - - - - 1.000 - - solute carrier family 6 member 4 [Source:NCBI gene;Acc:404747]
20. DTX1 ENSGALG00000027897 1 1 - - - - - - - - - 1.000 deltex E3 ubiquitin ligase 1 [Source:HGNC Symbol;Acc:HGNC:3060]
21. ENSGALG00000029114 ENSGALG00000029114 4 1 - - - - - - - 1.000 - -
22. ENSGALG00000007388 ENSGALG00000007388 41 1 - - - - - - - 1.000 - -
23. UNC13B ENSGALG00000002165 3 1 - - - - - - - 1.000 - - unc-13 homolog B [Source:HGNC Symbol;Acc:HGNC:12566]
24. STAR ENSGALG00000003242 4 1 - - - - - - - 1.000 - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
25. BMPR1A ENSGALG00000002003 20 1 - - - - - - - 1.000 - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
26. ENSGALG00000025781 ENSGALG00000025781 1 1 - - - - - - - 1.000 - -
27. TSGA10 ENSGALG00000016757 4 1 - - - - - - - 1.000 - - testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]
28. MYLK2 ENSGALG00000006273 5 1 - - - - - - - 1.000 - - myosin light chain kinase 2 [Source:NCBI gene;Acc:396356]
29. WDR90_1 ENSGALG00000028172 2 1 - - - - - - - 1.000 - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
30. BCORL1 ENSGALG00000003976 9 1 - - - - - - - 1.000 - - BCL6 corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:25657]
31. PDCD4 ENSGALG00000008700 574 1 - - - - - - - 1.000 - - programmed cell death 4 [Source:NCBI gene;Acc:374191]
32. C12orf55 C12orf55 0 1 - - - - - - - 1.000 - -
33. INHBB ENSGALG00000028770 2 1 - - - - - 1.000 - - - - inhibin subunit beta B [Source:NCBI gene;Acc:396126]
34. HTR7 ENSGALG00000040549 1 1 - - - - - - - - - 1.000 5-hydroxytryptamine (serotonin) receptor 7, adenylate cyclase-coupled [Source:NCBI gene;Acc:423794]
35. SMTN 18 1 - - - - - - - 1.000 - - smoothelin, transcript variant X2
36. EXOC6B ENSGALG00000016098 3 1 - - - - - - - 1.000 - - exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
37. WDR78 ENSGALG00000045792 6 1 - - - - - - - 1.000 - - WD repeat domain 78 [Source:HGNC Symbol;Acc:HGNC:26252]
38. CBLN1 ENSGALG00000042664 15 1 - - - - - - - 1.000 - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
39. ENSGALG00000018621 ENSGALG00000018621 8 1 - - - - - - - 1.000 - -
40. SLC25A42 ENSGALG00000002621 6 1 - - - - - - - 1.000 - - solute carrier family 25 member 42 [Source:HGNC Symbol;Acc:HGNC:28380]
41. KCNJ5 ENSGALG00000001181 11 1 - - - - - - 1.000 - - - potassium voltage-gated channel subfamily J member 5 [Source:HGNC Symbol;Acc:HGNC:6266]
42. PHACTR3 250 1 - - - - - - - 1.000 - - phosphatase and actin regulator 3, transcript variant X4
43. SPOCK3 ENSGALG00000009568 33 1 - - - - - - - 1.000 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]
44. FAM160A1 ENSGALG00000010090 10 1 - - - - - - - 1.000 - - family with sequence similarity 160 member A1 [Source:HGNC Symbol;Acc:HGNC:34237]
45. BAFF BAFF 40 1 - - - - - - - 1.000 - -
46. GTF2A1L ENSGALG00000026747 13 1 - - - - - - - 1.000 - - general transcription factor IIA subunit 1 like [Source:NCBI gene;Acc:100534591]
47. GABRG2 ENSGALG00000038042 211 1 - - - - - - - 1.000 - - gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
48. VWA3B ENSGALG00000040709 5 1 - - - - - 1.000 - - - - von Willebrand factor A domain containing 3B [Source:HGNC Symbol;Acc:HGNC:28385]
49. WNT3 ENSGALG00000001079 8 1 - - - - - 1.000 - - - - Wnt family member 3 [Source:NCBI gene;Acc:374142]
50. RADIL ENSGALG00000004504 0 1 - - - - - - - 1.000 - - Rap associating with DIL domain [Source:HGNC Symbol;Acc:HGNC:22226]
51. LOC421081 ENSGALG00000015106 0 1 - - - - - - - 1.000 - - uncharacterized LOC421081, transcript variant X1
52. ENSGALG00000028340 ENSGALG00000028340 31 1 - - - - - - - 1.000 - -
53. DTX4 ENSGALG00000010835 25 1 - - - - - - - 1.000 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
54. SLC6A11 ENSGALG00000004879 16 1 - - - - - - - 1.000 - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
55. SESN2_1 ENSGALG00000005648, ENSGALG00000037603 2 1 - - - - - - - 1.000 - - sestrin 2 [Source:HGNC Symbol;Acc:HGNC:20746]
56. B3GALT6 ENSGALG00000001859 5 1 - - - - - - - 1.000 - - beta-1,3-galactosyltransferase 6
57. ZNF22 ZNF22 25 1 - - - - - - - 1.000 - -
58. DSCAM ENSGALG00000016138 16 1 - - - - - - - 1.000 - - DS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]
59. ENSGALG00000015793 ENSGALG00000015793 12 1 - - - - - - - - - 1.000
60. TOX3 ENSGALG00000034649 54 1 - - - - - - - 1.000 - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
61. ENSGALG00000027796 ENSGALG00000027796 7 1 - - - - - - - 1.000 - -
62. GGT5 ENSGALG00000040504 24 1 - - - - - - - 1.000 - - gamma-glutamyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4260]
63. CKMT1A ENSGALG00000008352 44 1 - - - - - - - 1.000 - - creatine kinase, mitochondrial 1A [Source:NCBI gene;Acc:374002]
64. OCM2 ENSGALG00000003465 74 1 - - - - - - - 1.000 - - oncomodulin 2 [Source:NCBI gene;Acc:396531]
65. NIM1 NIM1 18 1 - - - - - - - 1.000 - -
66. HECA ENSGALG00000013824 14 1 - - - - - - - 1.000 - - hdc homolog, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:21041]
67. CSRP3 ENSGALG00000004044 456 1 - - - - - - - 1.000 - - cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
68. WDR52 WDR52 37 1 - - - - - - - 1.000 - -
69. EPSTI1 ENSGALG00000016964 6 1 - - - - - - - 1.000 - - epithelial stromal interaction 1 [Source:HGNC Symbol;Acc:HGNC:16465]
70. ENSGALG00000022661 ENSGALG00000022661 9 1 - - - - - - - 1.000 - -
71. TGFBR2 ENSGALG00000011442 3 1 - - - - - - - 1.000 - - transforming growth factor beta receptor 2 [Source:NCBI gene;Acc:396399]
72. DOK6 ENSGALG00000013753 2 1 - - - - - - - 1.000 - - docking protein 6 [Source:HGNC Symbol;Acc:HGNC:28301]
73. CPS1 ENSGALG00000002944 2 1 - - - - - - - 1.000 - - carbamoyl-phosphate synthase 1 [Source:NCBI gene;Acc:428994]
74. HSPB7L ENSGALG00000028183 795 1 - - - - - - - 1.000 - - heat shock protein beta-7-like
75. CTRB2 ENSGALG00000000038 6 1 - - - - - - - 1.000 - - chymotrypsinogen B2 [Source:NCBI gene;Acc:431235]
76. ELFN2 ENSGALG00000012446 11 1 - - - - - - - - - 1.000 extracellular leucine rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29396]
77. SRPX2 ENSGALG00000006796 32 1 - - - - - 1.000 - - - - sushi repeat containing protein X-linked 2 [Source:HGNC Symbol;Acc:HGNC:30668]
78. SHANK2 ENSGALG00000035916 9 1 - - - - - 1.000 - - - - SH3 and multiple ankyrin repeat domains 2, transcript variant X10
79. TNFRSF13B ENSGALG00000024122 0 1 - - - - - - - 1.000 - - TNF receptor superfamily member 13B [Source:NCBI gene;Acc:770275]
80. ADCK3 ADCK3 110 1 - - - - - - - 1.000 - -
81. EIF4H ENSGALG00000001313 59 1 - - - - - - - 1.000 - - eukaryotic translation initiation factor 4H [Source:NCBI gene;Acc:417490]
82. COL15A1 ENSGALG00000034119 9 1 - - - - - - - 1.000 - - collagen type XV alpha 1 chain, transcript variant X6
83. LICOS LICOS 13 1 - - - - - - - 1.000 - -
84. E2F3 ENSGALG00000012680 21 1 - - - - - - - 1.000 - - E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
85. GLRA2 ENSGALG00000016571 10 1 - - - - - - - 1.000 - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
86. ENSGALG00000010288 ENSGALG00000010288 3 1 - - - - - - - 1.000 - -
87. RNF17 ENSGALG00000045414 2 1 - - - - - - - 1.000 - - ring finger protein 17, transcript variant X2
88. APOD ENSGALG00000006995 2 1 - - - - - - - 1.000 - - apolipoprotein D [Source:NCBI gene;Acc:424893]
89. ENSGALG00000005482 ENSGALG00000005482 1 1 - - - - - - - 1.000 - -
90. ENSGALG00000005344 ENSGALG00000005344 6 1 - - - - - - - - - 1.000
91. AMER3 ENSGALG00000041501 5 1 - - - - - - - 1.000 - - APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
92. PLEKHG3 ENSGALG00000036199 1 1 - - - - - - - - - 1.000 pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
93. USP19 ENSGALG00000006824 44 1 - - - - - - - 1.000 - - ubiquitin specific peptidase 19 [Source:HGNC Symbol;Acc:HGNC:12617]
94. DSEL ENSGALG00000042505 92 1 - - - - - - 1.000 - - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
95. ENSGALG00000024369 ENSGALG00000024369 4 1 - - - - - 1.000 - - - -
96. MAP2K1 ENSGALG00000007687 250 1 - - - - - - - 1.000 - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
97. GAL12 GAL12 2 1 - - - - - - - - - 1.000
98. SMIM10 SMIM10 2 1 - - - - - 1.000 - - - -
99. BRF2 ENSGALG00000003124 1 1 - - - - - - - - - 1.000 BRF2, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:17298]
100. FOXI1 ENSGALG00000002105 0 1 - - - - - - - 1.000 - - forkhead box I1 [Source:HGNC Symbol;Acc:HGNC:3815]

There are 400 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA