Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TAF1A

Gene Name Gene ID Reads Annotation
TAF1A ENSGALG00000009441 2431 TATA-box binding protein associated factor, RNA polymerase I subunit A [Source:NCBI gene;Acc:421338]











Genes with expression patterns similar to TAF1A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TAF1A ENSGALG00000009441 2431 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TATA-box binding protein associated factor, RNA polymerase I subunit A [Source:NCBI gene;Acc:421338]
2. LIMS1 ENSGALG00000029970 7244 1.708 - - - - - - 0.804 0.904 - - LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:414880]
3. TMEM161A ENSGALG00000025809 2813 1.662 - - - - - - 0.774 0.888 - - transmembrane protein 161A [Source:HGNC Symbol;Acc:HGNC:26020]
4. RNH1 ENSGALG00000006904 14542 1.61 - - - - - - 0.716 0.894 - - ribonuclease/angiogenin inhibitor 1 [Source:NCBI gene;Acc:423111]
5. IRAK1BP1 ENSGALG00000015892 2236 1.588 - - - - - - 0.780 0.808 - - interleukin 1 receptor associated kinase 1 binding protein 1 [Source:NCBI gene;Acc:421857]
6. CYB5R2 ENSGALG00000032372 7967 1.58 - - - - - - 0.722 0.858 - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
7. BET1L ENSGALG00000004172 5305 1.49 - - - - - - 0.734 0.756 - - Bet1 golgi vesicular membrane trafficking protein like [Source:NCBI gene;Acc:422985]
8. TRUB2 ENSGALG00000004920 5425 1.45 - - - - - 0.734 0.716 - - - TruB pseudouridine synthase family member 2 [Source:HGNC Symbol;Acc:HGNC:17170]
9. PHLDB2 ENSGALG00000015377 8560 1.441 - - - - - - 0.711 0.730 - - pleckstrin homology like domain family B member 2 [Source:HGNC Symbol;Acc:HGNC:29573]
10. ITFG2 ENSGALG00000014335 1896 0.924 - - - - - - - 0.924 - - integrin alpha FG-GAP repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:30879]
11. RCAN3 ENSGALG00000004282 7778 0.919 - - - - - - - 0.919 - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
12. ARID2 ENSGALG00000033074 3461 0.918 - - - - - - - 0.918 - - AT-rich interaction domain 2 [Source:HGNC Symbol;Acc:HGNC:18037]
13. GLT8D1 ENSGALG00000001642 4232 0.917 - - - - - - - 0.917 - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
14. VPS13D ENSGALG00000034777 2350 0.915 - - - - - - - 0.915 - - vacuolar protein sorting 13 homolog D [Source:HGNC Symbol;Acc:HGNC:23595]
15. LRIG3 ENSGALG00000009755 6655 0.915 - - - - - - - 0.915 - - leucine rich repeats and immunoglobulin like domains 3 [Source:NCBI gene;Acc:417813]
16. CREPT CREPT 17142 0.912 - - - - - - - 0.912 - -
17. PDLIM5 ENSGALG00000012211 3064 0.911 - - - - - - - 0.911 - - PDZ and LIM domain 5 [Source:NCBI gene;Acc:422699]
18. BACE2 ENSGALG00000034932 1570 0.911 - - - - - - - 0.911 - - beta-secretase 2 [Source:HGNC Symbol;Acc:HGNC:934]
19. AIP ENSGALG00000040247 4166 0.91 - - - - - - - 0.910 - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
20. NCAPH ENSGALG00000032270 2103 0.908 - - - - - - - 0.908 - - non-SMC condensin I complex subunit H [Source:NCBI gene;Acc:425304]
21. PCYOX1 ENSGALG00000013878 2200 0.908 - - - - - - - 0.908 - - prenylcysteine oxidase 1 [Source:HGNC Symbol;Acc:HGNC:20588]
22. MMP15 ENSGALG00000038758 49988 0.905 - - - - - - - 0.905 - - matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]
23. FBXL17 ENSGALG00000000276 2443 0.905 - - - - - - - 0.905 - - F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
24. HDAC1 ENSGALG00000003297 3528 0.904 - - - - - - - 0.904 - - histone deacetylase 1 [Source:NCBI gene;Acc:373961]
25. MTIF2 ENSGALG00000031265 2366 0.904 - - - - - - - 0.904 - - mitochondrial translational initiation factor 2 [Source:NCBI gene;Acc:421213]
26. SLC19A1 ENSGALG00000030511 1397 0.903 - - - - - - - 0.903 - - solute carrier family 19 member 1 [Source:NCBI gene;Acc:424034]
27. FBXO7 ENSGALG00000012569 4124 0.903 - - - - - - - 0.903 - - F-box protein 7 [Source:NCBI gene;Acc:418063]
28. AGRN ENSGALG00000039193 8135 0.902 - - - - - - - 0.902 - - agrin [Source:NCBI gene;Acc:396538]
29. BUD13_1 ENSGALG00000025882 1118 0.902 - - - - - - - 0.902 - - BUD13 homolog [Source:NCBI gene;Acc:428248]
30. NPAT ENSGALG00000017162 1574 0.901 - - - - - - - 0.901 - - nuclear protein, coactivator of histone transcription [Source:HGNC Symbol;Acc:HGNC:7896]
31. FBXL8 ENSGALG00000003201 847 0.901 - - - - - - - 0.901 - - F-box and leucine rich repeat protein 8 [Source:NCBI gene;Acc:415701]
32. SMG8 ENSGALG00000005093 5557 0.9 - - - - - - - 0.900 - - SMG8 nonsense mediated mRNA decay factor
33. KIF21B ENSGALG00000034347 4144 0.899 - - - - - - - 0.899 - - kinesin family member 21B [Source:HGNC Symbol;Acc:HGNC:29442]
34. ZBTB18 ENSGALG00000010705 3433 0.899 - - - - - - - 0.899 - - zinc finger and BTB domain containing 18 [Source:HGNC Symbol;Acc:HGNC:13030]
35. NUDT6 ENSGALG00000011834 1309 0.899 - - - - - - - 0.899 - - nudix hydrolase 6 [Source:HGNC Symbol;Acc:HGNC:8053]
36. HYAL1 ENSGALG00000000785 1778 0.899 - - - - - - - 0.899 - - hyaluronoglucosaminidase 1, transcript variant X3
37. DOK5 ENSGALG00000007786 1732 0.899 - - - - - - - 0.899 - - docking protein 5 [Source:HGNC Symbol;Acc:HGNC:16173]
38. SPATA2 ENSGALG00000008026 2040 0.899 - - - - - - - 0.899 - - spermatogenesis associated 2 [Source:NCBI gene;Acc:419355]
39. TXNDC11 ENSGALG00000003154 2224 0.897 - - - - - - - 0.897 - - thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
40. BRCA1 ENSGALG00000002781 2052 0.897 - - - - - - - 0.897 - - BRCA1, DNA repair associated [Source:NCBI gene;Acc:373983]
41. ZNF384 ENSGALG00000032599 2369 0.895 - - - - - - - 0.895 - - zinc finger protein 384 [Source:NCBI gene;Acc:770350]
42. NDRG3 ENSGALG00000001492 5919 0.894 - - - - - - - 0.894 - - NDRG family member 3 [Source:HGNC Symbol;Acc:HGNC:14462]
43. CCNL2 ENSGALG00000001551 2620 0.893 - - - - - - - 0.893 - - cyclin L2 [Source:NCBI gene;Acc:395124]
44. PDZD8 ENSGALG00000029095 1068 0.892 - - - - - - - 0.892 - - PDZ domain containing 8 [Source:HGNC Symbol;Acc:HGNC:26974]
45. G2E3 ENSGALG00000009907 1754 0.892 - - - - - - - 0.892 - - G2/M-phase specific E3 ubiquitin protein ligase [Source:NCBI gene;Acc:423305]
46. ATP1B3 ENSGALG00000002764 1890 0.892 - - - - - - - 0.892 - - ATPase Na+/K+ transporting subunit beta 3 [Source:NCBI gene;Acc:396549]
47. AGGF1 ENSGALG00000004311 3011 0.891 - - - - - - - 0.891 - - angiogenic factor with G-patch and FHA domains 1, transcript variant X1
48. ERMARD ENSGALG00000011186 1001 0.891 - - - - - - - 0.891 - - ER membrane associated RNA degradation [Source:HGNC Symbol;Acc:HGNC:21056]
49. HAGHL ENSGALG00000021040 1568 0.889 - - - - - - - 0.889 - - hydroxyacylglutathione hydrolase-like [Source:NCBI gene;Acc:416536]
50. GNG12 ENSGALG00000026591 5817 0.889 - - - - - - - 0.889 - - G protein subunit gamma 12, transcript variant X21
51. GKAP1 ENSGALG00000012586 2908 0.888 - - - - - - - 0.888 - - G kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:17496]
52. UBN1 ENSGALG00000031416 2848 0.887 - - - - - - - 0.887 - - ubinuclein 1 [Source:NCBI gene;Acc:416398]
53. TICAM1 ENSGALG00000026850 723 0.887 - - - - - - - 0.887 - - toll like receptor adaptor molecule 1 [Source:NCBI gene;Acc:100008585]
54. APBB2 ENSGALG00000014262 569 0.887 - - - - - - - 0.887 - - amyloid beta precursor protein binding family B member 2 [Source:HGNC Symbol;Acc:HGNC:582]
55. CREBL2 ENSGALG00000037030 1247 0.886 - - - - - - - 0.886 - - cAMP responsive element binding protein like 2 [Source:NCBI gene;Acc:426496]
56. PPP2R3A ENSGALG00000034512 1091 0.886 - - - - - - - 0.886 - - protein phosphatase 2 regulatory subunit B''alpha [Source:HGNC Symbol;Acc:HGNC:9307]
57. CLCN5 ENSGALG00000007234 1143 0.885 - - - - - - - 0.885 - - chloride voltage-gated channel 5 [Source:HGNC Symbol;Acc:HGNC:2023]
58. MXD4 ENSGALG00000015688 1472 0.885 - - - - - - - 0.885 - - MAX dimerization protein 4 [Source:NCBI gene;Acc:422890]
59. KIAA1009 KIAA1009 1261 0.884 - - - - - - - 0.884 - -
60. TAF5 ENSGALG00000008241 5227 0.884 - - - - - - - 0.884 - - TATA-box binding protein associated factor 5 [Source:NCBI gene;Acc:423872]
61. CUX1_1 ENSGALG00000021636 3705 0.883 - - - - - - - 0.883 - - cut like homeobox 1 [Source:NCBI gene;Acc:101749861]
62. ITFG1 ENSGALG00000004049 2934 0.882 - - - - - - - 0.882 - - integrin alpha FG-GAP repeat containing 1 [Source:NCBI gene;Acc:415742]
63. ABHD12B ENSGALG00000020342 511 0.882 - - - - - - - 0.882 - - abhydrolase domain containing 12B, transcript variant X2
64. PTPN4 3030 0.882 - - - - - - - 0.882 - - protein tyrosine phosphatase, non-receptor type 4, transcript variant X2
65. FGFR1 ENSGALG00000039786 4480 0.88 - - - - - - - 0.880 - - fibroblast growth factor receptor 1 [Source:NCBI gene;Acc:396516]
66. NT5C3B ENSGALG00000003651 5190 0.879 - - - - - - - 0.879 - - 5'-nucleotidase, cytosolic IIIB [Source:NCBI gene;Acc:420034]
67. RASA3 ENSGALG00000016817 2146 0.879 - - - - - - - 0.879 - - RAS p21 protein activator 3 [Source:NCBI gene;Acc:418736]
68. ASNSD1 ENSGALG00000041666 3757 0.879 - - - - - - - 0.879 - - asparagine synthetase domain containing 1 [Source:NCBI gene;Acc:423983]
69. HOOK1 ENSGALG00000010889 1007 0.878 - - - - - - - 0.878 - - hook microtubule tethering protein 1 [Source:NCBI gene;Acc:424675]
70. ARNTL2 ENSGALG00000014096 998 0.878 - - - - - - - 0.878 - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:NCBI gene;Acc:373925]
71. EFCAB10 ENSGALG00000045949 514 0.878 - - - - - - - 0.878 - - EF-hand calcium binding domain 10 [Source:HGNC Symbol;Acc:HGNC:34531]
72. CCDC117 ENSGALG00000005784 185 0.877 - - - - - - - 0.877 - - coiled-coil domain containing 117 [Source:HGNC Symbol;Acc:HGNC:26599]
73. SLC25A28 ENSGALG00000007479 4902 0.877 - - - - - - - 0.877 - - solute carrier family 25 member 28 [Source:HGNC Symbol;Acc:HGNC:23472]
74. ENTPD4 ENSGALG00000000390 1394 0.875 - - - - - - - 0.875 - - ectonucleoside triphosphate diphosphohydrolase 4 [Source:HGNC Symbol;Acc:HGNC:14573]
75. PKN3 532 0.874 - - - - - - - 0.874 - - protein kinase N3, transcript variant X2
76. EML1 1941 0.873 - - - - - - - 0.873 - - echinoderm microtubule associated protein like 1, transcript variant X11
77. ASTN2 ENSGALG00000007038 1748 0.873 - - - - - - - 0.873 - - astrotactin 2 [Source:HGNC Symbol;Acc:HGNC:17021]
78. ANGPTL1 ENSGALG00000004290 1922 0.873 - - - - - - - 0.873 - - angiopoietin like 1 [Source:NCBI gene;Acc:770850]
79. TANK ENSGALG00000011131 3382 0.872 - - - - - - - 0.872 - - TRAF family member associated NFKB activator [Source:NCBI gene;Acc:424190]
80. TCTN2 ENSGALG00000023683 3596 0.872 - - - - - - - 0.872 - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
81. BUD13 ENSGALG00000025882 1800 0.872 - - - - - - - 0.872 - - BUD13 homolog [Source:NCBI gene;Acc:428248]
82. EPGN ENSGALG00000010859 187 0.872 - - - - - - - 0.872 - - epithelial mitogen [Source:NCBI gene;Acc:497270]
83. LRPAP1 ENSGALG00000015612 3526 0.872 - - - - - - - 0.872 - - LDL receptor related protein associated protein 1 [Source:NCBI gene;Acc:395936]
84. CCDC80 ENSGALG00000015193 1387 0.872 - - - - - - - 0.872 - - coiled-coil domain containing 80 [Source:NCBI gene;Acc:395074]
85. ZNF750 ENSGALG00000001518 151 0.872 - - - - - - - 0.872 - - zinc finger protein 750 [Source:HGNC Symbol;Acc:HGNC:25843]
86. TPM3 ENSGALG00000013537 934 0.87 - - - - - - - 0.870 - - Gallus gallus tropomyosin 3 (TPM3), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001352039]
87. ENSGALG00000018634 ENSGALG00000018634 414 0.869 - - - - - - - 0.869 - -
88. RBM46 ENSGALG00000009278 98 0.869 - - - - - - - 0.869 - - RNA binding motif protein 46 [Source:HGNC Symbol;Acc:HGNC:28401]
89. ENSGALG00000021439 ENSGALG00000021439 628 0.868 - - - - - - - 0.868 - -
90. NRG1 ENSGALG00000015422 196 0.868 - - - - - - - 0.868 - - neuregulin 1 [Source:NCBI gene;Acc:373906]
91. LBP ENSGALG00000006756 1684 0.867 - - - - - - - 0.867 - - lipopolysaccharide binding protein, transcript variant X1
92. GP1BB ENSGALG00000021529 348 0.867 - - - - - - - 0.867 - - glycoprotein Ib platelet subunit beta [Source:HGNC Symbol;Acc:HGNC:4440]
93. PAIP1 ENSGALG00000014867 202 0.867 - - - - - - - 0.867 - - poly(A) binding protein interacting protein 1 [Source:NCBI gene;Acc:427195]
94. DOCK10 ENSGALG00000005030 848 0.866 - - - - - - - 0.866 - - dedicator of cytokinesis 10 [Source:HGNC Symbol;Acc:HGNC:23479]
95. KLF6 ENSGALG00000033178 679 0.866 - - - - - - - 0.866 - - Kruppel like factor 6 [Source:NCBI gene;Acc:420463]
96. PECR ENSGALG00000011497 1714 0.866 - - - - - - - 0.866 - - peroxisomal trans-2-enoyl-CoA reductase [Source:NCBI gene;Acc:424224]
97. MED28 ENSGALG00000007138 7686 0.866 - - - - - - 0.866 - - - mediator complex subunit 28 [Source:HGNC Symbol;Acc:HGNC:24628]
98. TTC38 ENSGALG00000014551 1135 0.865 - - - - - - - 0.865 - - tetratricopeptide repeat domain 38 [Source:HGNC Symbol;Acc:HGNC:26082]
99. CRABP2 ENSGALG00000029140 559 0.865 - - - - - - - 0.865 - - cellular retinoic acid binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2339]
100. NPR2 ENSGALG00000027630 871 0.865 - - - - - - - 0.865 - - natriuretic peptide receptor 2 [Source:HGNC Symbol;Acc:HGNC:7944]

There are 325 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA