Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SS4R

Gene Name Gene ID Reads Annotation
SS4R SS4R 19











Genes with expression patterns similar to SS4R

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SS4R SS4R 19 6 - - 1.000 1.000 1.000 - 1.000 1.000 - 1.000
2. MFSD4 MFSD4 1 1.916 - - 0.916 - - - - - - 1.000
3. ANKEF1 ENSGALG00000008996 12 1.697 - - 0.765 - - - - 0.932 - - ankyrin repeat and EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:15803]
4. ACKR4 ENSGALG00000041491 7 1.662 - - 0.916 0.746 - - - - - - atypical chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1611]
5. LHX4 ENSGALG00000036587 14 1.633 - - 0.811 - - - - - - 0.822 LIM homeobox 4 [Source:HGNC Symbol;Acc:HGNC:21734]
6. C17orf62 C17orf62 37 1.439 - - 0.713 - - - - - - 0.726
7. IL1R2 ENSGALG00000046326 1 1 - - - - - - - - - 1.000 interleukin 1 receptor type 2 [Source:HGNC Symbol;Acc:HGNC:5994]
8. ENSGALG00000029052 ENSGALG00000029052 1 1 - - - - - - - - - 1.000
9. HEPHL1 ENSGALG00000043027 14 1 - - - - - - - - - 1.000 hephaestin like 1 [Source:HGNC Symbol;Acc:HGNC:30477]
10. TPH2 ENSGALG00000010198 5 1 - - - - - - - 1.000 - - tryptophan hydroxylase 2 [Source:NCBI gene;Acc:408026]
11. FEV ENSGALG00000026698 216 1 - - - - - - - - - 1.000 FEV, ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:18562]
12. LOC769668 ENSGALG00000021450 31 1 - - - - - - - - - 1.000 estradiol 17-beta-dehydrogenase 2-like
13. ENSGALG00000027704 ENSGALG00000027704 2 1 - - - - - - - - - 1.000
14. CDK5R2 ENSGALG00000025729 1 1 - - - - - - - - - 1.000 cyclin dependent kinase 5 regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:1776]
15. ENSGALG00000028269 ENSGALG00000028269 1 1 - - - - - - - - - 1.000
16. SCMH1 ENSGALG00000000672 3 1 - - - - - - - - - 1.000 Scm polycomb group protein homolog 1 [Source:HGNC Symbol;Acc:HGNC:19003]
17. B9D1 ENSGALG00000005096 760 1 - - - - - - - - - 1.000 B9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24123]
18. ATP6V1A ENSGALG00000014800 4 1 - - - - - - - - - 1.000 ATPase H+ transporting V1 subunit A [Source:NCBI gene;Acc:395821]
19. ENSGALG00000023054 ENSGALG00000023054 1 1 - - - - - - - - - 1.000
20. GPRIN2 ENSGALG00000002048 17 1 - - - - - - - - - 1.000 G protein regulated inducer of neurite outgrowth 2 [Source:NCBI gene;Acc:395648]
21. AGTR2 ENSGALG00000005936 3 1 - - - - - - - - - 1.000 angiotensin II receptor type 2 [Source:HGNC Symbol;Acc:HGNC:338]
22. MTMR11 ENSGALG00000035923 1 1 - - - - - - - - - 1.000 myotubularin related protein 11 [Source:HGNC Symbol;Acc:HGNC:24307]
23. NR3C1 ENSGALG00000032992 4 1 - - - - - - - - - 1.000 nuclear receptor subfamily 3 group C member 1 [Source:NCBI gene;Acc:416343]
24. TEKT3 ENSGALG00000001348 13 1 - - - - - - - - - 1.000 tektin 3 [Source:HGNC Symbol;Acc:HGNC:14293]
25. NR0B2 ENSGALG00000000887 2 1 - - - - - - - - - 1.000 nuclear receptor subfamily 0 group B member 2 [Source:NCBI gene;Acc:768353]
26. RBP3 ENSGALG00000005978 1 1 - - - - - - - - - 1.000 retinol binding protein 3 [Source:NCBI gene;Acc:395553]
27. CREB3L3 ENSGALG00000001252 1 1 - - - - - - - - - 1.000 cAMP responsive element binding protein 3 like 3 [Source:HGNC Symbol;Acc:HGNC:18855]
28. RASGEF1C ENSGALG00000006076 1 1 - - - - - - - - - 1.000 RasGEF domain family member 1C [Source:NCBI gene;Acc:416296]
29. ZFYVE21 ENSGALG00000011534 7 1 - - - - - - - - - 1.000 zinc finger FYVE-type containing 21 [Source:NCBI gene;Acc:423486]
30. CTRB2 ENSGALG00000000038 6 1 - - - - - - - - - 1.000 chymotrypsinogen B2 [Source:NCBI gene;Acc:431235]
31. B3GALNT1 1 1 - - - - - - - - - 1.000 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group), transcript variant X14
32. SNX19 ENSGALG00000001425 2 1 - - - - - - - - - 1.000 sorting nexin 19 [Source:HGNC Symbol;Acc:HGNC:21532]
33. MUSK ENSGALG00000015728 7 1 - - - - - - - - - 1.000 muscle associated receptor tyrosine kinase [Source:NCBI gene;Acc:373897]
34. CTLA4 ENSGALG00000008666 5 1 - - - - - - - - - 1.000 cytotoxic T-lymphocyte associated protein 4 [Source:NCBI gene;Acc:424106]
35. DD1 DD1 4 1 - - - - - - - - - 1.000
36. MTMR3 ENSGALG00000008051 9 1 - - - - - - - - - 1.000 myotubularin related protein 3 [Source:NCBI gene;Acc:417015]
37. SNORD98 SNORD98 1 1 - - - - - - - - - 1.000
38. SPEG ENSGALG00000043198 2 1 - - - - - - - - - 1.000 SPEG complex locus, transcript variant X12
39. FOXE3 11 0.967 - - - - - - - 0.967 - - forkhead box E3
40. ENSGALG00000026135 ENSGALG00000026135 16 0.967 - - - - - - - 0.967 - -
41. CACNA1I ENSGALG00000035051 27 0.967 - - - - - - - 0.967 - - calcium voltage-gated channel subunit alpha1 I, transcript variant X3
42. GLYCTK ENSGALG00000004018 5 0.967 - - - - - - - 0.967 - - glycerate kinase [Source:HGNC Symbol;Acc:HGNC:24247]
43. TRERF1 ENSGALG00000009896 42 0.967 - - - - - - - 0.967 - - transcriptional regulating factor 1 [Source:HGNC Symbol;Acc:HGNC:18273]
44. TUBB3 571 0.967 - - - - - - - 0.967 - - tubulin beta 3 class III
45. PFKFB2 ENSGALG00000001117 2 0.967 - - - - - - - 0.967 - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 [Source:HGNC Symbol;Acc:HGNC:8873]
46. ABL2 ENSGALG00000030357 39 0.967 - - - - - - - 0.967 - - ABL proto-oncogene 2, non-receptor tyrosine kinase, transcript variant X2
47. MYH13 4 0.967 - - - - - - - 0.967 - - myosin, heavy chain 13, skeletal muscle
48. MTMR1 ENSGALG00000009085 9 0.965 - - - - - - - - - 0.965 myotubularin related protein 1 [Source:HGNC Symbol;Acc:HGNC:7449]
49. PLXNA4 ENSGALG00000006473 125 0.963 - - - - - - - 0.963 - - plexin A4 [Source:HGNC Symbol;Acc:HGNC:9102]
50. GALNT11 ENSGALG00000006233 210 0.961 - - - - - - - 0.961 - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
51. STARD10 ENSGALG00000002577 245 0.951 - - - - - - - 0.951 - - StAR related lipid transfer domain containing 10
52. KCNJ9 ENSGALG00000009935 69 0.95 - - - - - - - - - 0.950 potassium inwardly-rectifying channel, subfamily J, member 9
53. FAM173A ENSGALG00000021364 4 0.949 - - - - - - - 0.949 - - family with sequence similarity 173 member A [Source:NCBI gene;Acc:416404]
54. GK ENSGALG00000016285 35 0.94 - - - - - - - 0.940 - - glycerol kinase, transcript variant X4
55. gga-mir-1466 ENSGALG00000025170 487 0.932 - - - - - - - 0.932 - - gga-mir-1466 [Source:miRBase;Acc:MI0007071]
56. GPHB5 ENSGALG00000028839 45 0.931 - - - - - - - 0.931 - - glycoprotein hormone beta 5 [Source:HGNC Symbol;Acc:HGNC:18055]
57. AP4S1 ENSGALG00000009936 55 0.93 - - - - - - - - - 0.930 adaptor related protein complex 4 subunit sigma 1 [Source:HGNC Symbol;Acc:HGNC:575]
58. UBA2 ENSGALG00000005006 243 0.926 - - - - - - - 0.926 - - ubiquitin like modifier activating enzyme 2 [Source:NCBI gene;Acc:415784]
59. RNF151 ENSGALG00000034803 16 0.923 - - 0.923 - - - - - - - ring finger protein 151, transcript variant X2
60. ENSGALG00000011411 ENSGALG00000011411 1 0.916 - - 0.916 - - - - - - -
61. DUPD1 ENSGALG00000005019 18 0.916 - - 0.916 - - - - - - - dual specificity phosphatase and pro isomerase domain containing 1 [Source:NCBI gene;Acc:423733]
62. NOS2 ENSGALG00000038096 7 0.916 - - 0.916 - - - - - - - nitric oxide synthase 2 [Source:NCBI gene;Acc:395807]
63. CRYGS ENSGALG00000006574 9 0.916 - - 0.916 - - - - - - - crystallin gamma S [Source:NCBI gene;Acc:429134]
64. ZNF770 ENSGALG00000009817 27 0.916 - - 0.916 - - - - - - - zinc finger protein 770 [Source:HGNC Symbol;Acc:HGNC:26061]
65. CNTNAP4 ENSGALG00000023179 13 0.916 - - 0.916 - - - - - - - contactin associated protein like 4
66. ENSGALG00000028137 ENSGALG00000028137 2 0.916 - - 0.916 - - - - - - -
67. PDE6B ENSGALG00000015373 1 0.916 - - 0.916 - - - - - - - Gallus gallus phosphodiesterase 6B (PDE6B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318440]
68. SYT12 ENSGALG00000004306 2 0.916 - - 0.916 - - - - - - - synaptotagmin 12 [Source:NCBI gene;Acc:422998]
69. DLL4 ENSGALG00000008514 3 0.916 - - 0.916 - - - - - - - delta like canonical Notch ligand 4 [Source:HGNC Symbol;Acc:HGNC:2910]
70. ODF2L ENSGALG00000006804 10 0.916 - - 0.916 - - - - - - - outer dense fiber of sperm tails 2 like [Source:HGNC Symbol;Acc:HGNC:29225]
71. BFIV21 BFIV21 30 0.916 - - 0.916 - - - - - - -
72. ARHGEF17 6 0.916 - - 0.916 - - - - - - - Rho guanine nucleotide exchange factor 17
73. TOR1AIP2 ENSGALG00000004017 2 0.916 - - 0.916 - - - - - - - torsin 1A interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:24055]
74. ENSGALG00000028957 ENSGALG00000028957 7 0.916 - - 0.916 - - - - - - -
75. AMOTL1 ENSGALG00000017208 5 0.916 - - 0.916 - - - - - - - angiomotin like 1 [Source:HGNC Symbol;Acc:HGNC:17811]
76. CHIC2 ENSGALG00000013931 21 0.916 - - 0.916 - - - - - - - cysteine rich hydrophobic domain 2 [Source:HGNC Symbol;Acc:HGNC:1935]
77. ATP6V1C2 ENSGALG00000016446 3 0.916 - - 0.916 - - - - - - - ATPase H+ transporting V1 subunit C2 [Source:HGNC Symbol;Acc:HGNC:18264]
78. TFAP4 ENSGALG00000027823 12 0.916 - - 0.916 - - - - - - - transcription factor AP-4 [Source:HGNC Symbol;Acc:HGNC:11745]
79. ARHGEF38 ENSGALG00000010577 1 0.916 - - 0.916 - - - - - - - Rho guanine nucleotide exchange factor 38, transcript variant X1
80. SNORD53 SNORD53 1 0.916 - - 0.916 - - - - - - -
81. PTPN3 ENSGALG00000022909 6 0.916 - - 0.916 - - - - - - - protein tyrosine phosphatase, non-receptor type 3 [Source:HGNC Symbol;Acc:HGNC:9655]
82. TMEM56 ENSGALG00000005580 10 0.916 - - 0.916 - - - - - - - transmembrane protein 56 [Source:NCBI gene;Acc:424483]
83. SLC25A38 ENSGALG00000041275 1 0.916 - - 0.916 - - - - - - - solute carrier family 25 member 38 [Source:HGNC Symbol;Acc:HGNC:26054]
84. RAB44 ENSGALG00000000544 6 0.916 - - 0.916 - - - - - - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
85. SI ENSGALG00000009511 5 0.916 - - 0.916 - - - - - - - sucrase-isomaltase
86. HIVEP3 ENSGALG00000027365 10 0.916 - - 0.916 - - - - - - - human immunodeficiency virus type I enhancer binding protein 3 [Source:HGNC Symbol;Acc:HGNC:13561]
87. KCNAB2 ENSGALG00000037241 1 0.916 - - 0.916 - - - - - - - potassium voltage-gated channel subfamily A regulatory beta subunit 2 [Source:HGNC Symbol;Acc:HGNC:6229]
88. ENSGALG00000006582 ENSGALG00000006582 8 0.916 - - 0.916 - - - - - - -
89. FMOD ENSGALG00000034067 165 0.916 - - - - - - - 0.916 - - fibromodulin [Source:NCBI gene;Acc:395814]
90. VANGL2 ENSGALG00000030643 3 0.916 - - 0.916 - - - - - - - VANGL planar cell polarity protein 2 [Source:HGNC Symbol;Acc:HGNC:15511]
91. TSNAXIP1 ENSGALG00000001533 9 0.916 - - 0.916 - - - - - - - translin associated factor X interacting protein 1, transcript variant X2
92. MADCAM1 ENSGALG00000028341 6 0.916 - - 0.916 - - - - - - - mucosal vascular addressin cell adhesion molecule 1
93. GRHL2 ENSGALG00000037687 3 0.916 - - 0.916 - - - - - - - grainyhead like transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:2799]
94. MEIG1 ENSGALG00000000451 12 0.916 - - 0.916 - - - - - - - meiosis/spermiogenesis associated 1 [Source:NCBI gene;Acc:769589]
95. RGS13 ENSGALG00000026810 8 0.916 - - 0.916 - - - - - - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
96. ENSGALG00000025761 ENSGALG00000025761 6 0.916 - - 0.916 - - - - - - -
97. C2CD3 ENSGALG00000017314 13 0.916 - - 0.916 - - - - - - - C2 calcium dependent domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24564]
98. CCDC178 6 0.916 - - 0.916 - - - - - - - coiled-coil domain containing 178, transcript variant X3
99. TMEM67 ENSGALG00000029287 2 0.916 - - 0.916 - - - - - - - transmembrane protein 67, transcript variant X2
100. CDKN2C ENSGALG00000010537 2 0.916 - - 0.916 - - - - - - - cyclin dependent kinase inhibitor 2C [Source:HGNC Symbol;Acc:HGNC:1789]

There are 134 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA