Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for SMARCA2

Gene Name Gene ID Reads Annotation
SMARCA2 ENSGALG00000010164 2211 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:NCBI gene;Acc:396040]











Genes with expression patterns similar to SMARCA2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SMARCA2 ENSGALG00000010164 2211 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:NCBI gene;Acc:396040]
2. TWSG1 ENSGALG00000008400 1869 0.891 - - 0.891 - - - - - - - twisted gastrulation BMP signaling modulator 1 [Source:NCBI gene;Acc:374024]
3. GSDMA ENSGALG00000013495 1650 0.883 - - 0.883 - - - - - - - gasdermin A [Source:NCBI gene;Acc:426132]
4. WHSC1 1712 0.878 - - 0.878 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
5. CHD9 ENSGALG00000039178 1168 0.871 - - 0.871 - - - - - - - chromodomain helicase DNA binding protein 9 [Source:HGNC Symbol;Acc:HGNC:25701]
6. MBSP MBSP 5634 0.869 - - 0.869 - - - - - - -
7. RRN3 ENSGALG00000041989 3934 0.867 - - 0.867 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
8. SMOC2 ENSGALG00000011205 340 0.866 - - 0.866 - - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
9. WAPAL WAPAL 625 0.865 - - 0.865 - - - - - - -
10. IFT81 ENSGALG00000003854 2534 0.865 - - 0.865 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
11. ZNF385D ENSGALG00000011283 2578 0.865 - - 0.865 - - - - - - - zinc finger protein 385D [Source:HGNC Symbol;Acc:HGNC:26191]
12. CDC5L ENSGALG00000016704 22893 0.864 - - 0.864 - - - - - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
13. AASDHPPT ENSGALG00000027981 1017 0.863 - - 0.863 - - - - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:NCBI gene;Acc:418975]
14. SNRB SNRB 4477 0.863 - - 0.863 - - - - - - -
15. TUBGCP3 ENSGALG00000016836 332 0.863 - - 0.863 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
16. SLC3A1 ENSGALG00000009973 608 0.863 - - 0.863 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
17. CAMSAP1 ENSGALG00000001692 2617 0.861 - - 0.861 - - - - - - - calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
18. DBN1 ENSGALG00000033405 216 0.861 - - 0.861 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
19. AKAP10 ENSGALG00000004679 103 0.861 - - 0.861 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
20. MAPRE3 ENSGALG00000031726 191 0.861 - - 0.861 - - - - - - - microtubule associated protein RP/EB family member 3 [Source:HGNC Symbol;Acc:HGNC:6892]
21. FAM134C 860 0.861 - - 0.861 - - - - - - - family with sequence similarity 134 member C
22. KCTD3 ENSGALG00000009678 335 0.861 - - 0.861 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
23. PRUNE PRUNE 452 0.86 - - 0.860 - - - - - - -
24. GON4L ENSGALG00000014643 1737 0.859 - - 0.859 - - - - - - - gon-4 like, transcript variant X2
25. YBX3 ENSGALG00000031890 819 0.859 - - 0.859 - - - - - - - Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
26. LRRC42 ENSGALG00000010743 384 0.859 - - 0.859 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
27. ABCC3 ENSGALG00000007522 340 0.859 - - 0.859 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
28. PTDSS2 ENSGALG00000004300 682 0.858 - - 0.858 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
29. L3MBTL3 ENSGALG00000034030 113 0.857 - - 0.857 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
30. CHAMP1 ENSGALG00000016813 508 0.857 - - 0.857 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
31. ATP8B4 ENSGALG00000002326 456 0.857 - - 0.857 - - - - - - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
32. PTPN2 ENSGALG00000013867 1128 0.857 - - 0.857 - - - - - - - protein tyrosine phosphatase, non-receptor type 2 [Source:NCBI gene;Acc:396409]
33. RQCD1 RQCD1 110 0.857 - - 0.857 - - - - - - -
34. TRMT10B ENSGALG00000029118 3093 0.857 - - 0.857 - - - - - - - tRNA methyltransferase 10B [Source:HGNC Symbol;Acc:HGNC:26454]
35. ABCE1 ENSGALG00000009961 958 0.856 - - 0.856 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
36. F2R ENSGALG00000014983 106 0.856 - - 0.856 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
37. FBXL5 ENSGALG00000014510 245 0.856 - - 0.856 - - - - - - - F-box and leucine rich repeat protein 5 [Source:HGNC Symbol;Acc:HGNC:13602]
38. CLEC16A ENSGALG00000007167 66 0.856 - - 0.856 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
39. BTBD9 ENSGALG00000010131 1870 0.856 - - 0.856 - - - - - - - BTB domain containing 9 [Source:NCBI gene;Acc:421429]
40. SMARCAD1 ENSGALG00000037339 149 0.856 - - 0.856 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
41. OSGIN2 ENSGALG00000042840 83 0.855 - - 0.855 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
42. CDC14B ENSGALG00000012627 110 0.855 - - 0.855 - - - - - - - Gallus gallus cell division cycle 14B (CDC14B), mRNA. [Source:RefSeq mRNA;Acc:NM_001318405]
43. CGNL1 ENSGALG00000004294 1177 0.855 - - 0.855 - - - - - - - cingulin like 1 [Source:HGNC Symbol;Acc:HGNC:25931]
44. MED12 ENSGALG00000036322 814 0.855 - - 0.855 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
45. ENSGALG00000004703 ENSGALG00000004703 112 0.855 - - 0.855 - - - - - - -
46. U4 U4 69 0.854 - - 0.854 - - - - - - -
47. MRC2 ENSGALG00000000461 48 0.854 - - 0.854 - - - - - - - mannose receptor C type 2 [Source:HGNC Symbol;Acc:HGNC:16875]
48. ITGB4 ENSGALG00000002389 44 0.854 - - 0.854 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
49. TRIM13 ENSGALG00000017011 92 0.854 - - 0.854 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
50. UEVLD ENSGALG00000006342 164 0.854 - - 0.854 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
51. SZT2 ENSGALG00000028561 255 0.854 - - 0.854 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
52. TDRD6 48 0.854 - - 0.854 - - - - - - - tudor domain containing 6
53. WBP4 ENSGALG00000016949 5858 0.853 - - 0.853 - - - - - - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
54. ENSGALG00000028964 ENSGALG00000028964 46 0.853 - - 0.853 - - - - - - -
55. IFT57 ENSGALG00000015356 5540 0.853 - - 0.853 - - - - - - - intraflagellar transport 57 [Source:HGNC Symbol;Acc:HGNC:17367]
56. NXPE3 ENSGALG00000015344 111 0.853 - - 0.853 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
57. TCTN2 ENSGALG00000023683 3596 0.853 - - 0.853 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
58. ENSGALG00000002020 ENSGALG00000002020 183 0.853 - - 0.853 - - - - - - -
59. MED15 ENSGALG00000006430 814 0.852 - - 0.852 - - - - - - - mediator complex subunit 15 [Source:HGNC Symbol;Acc:HGNC:14248]
60. ITM2B ENSGALG00000016996 1112 0.852 - - 0.852 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
61. SLC37A3 ENSGALG00000012849 836 0.852 - - 0.852 - - - - - - - solute carrier family 37 member 3 [Source:NCBI gene;Acc:418112]
62. SOBP ENSGALG00000043047 147 0.852 - - 0.852 - - - - - - - sine oculis binding protein homolog [Source:NCBI gene;Acc:421775]
63. RAD54L2 ENSGALG00000003243 187 0.851 - - 0.851 - - - - - - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
64. UBR2 ENSGALG00000009906 7717 0.85 - - 0.850 - - - - - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
65. ENSGALG00000008689 ENSGALG00000008689 232 0.85 - - 0.850 - - - - - - -
66. SLK ENSGALG00000008318 2220 0.85 - - 0.850 - - - - - - - STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
67. ENSGALG00000020103 ENSGALG00000020103 64 0.849 - - 0.849 - - - - - - -
68. RECQL ENSGALG00000013174 1323 0.849 - - 0.849 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
69. LRRC71 ENSGALG00000027351 695 0.849 - - 0.849 - - - - - - - leucine rich repeat containing 71 [Source:HGNC Symbol;Acc:HGNC:26556]
70. MLLT3 ENSGALG00000015078 502 0.849 - - 0.849 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
71. ATP10D ENSGALG00000014192 94 0.848 - - 0.848 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
72. NDUFB1 ENSGALG00000028537 2059 0.848 - - 0.848 - - - - - - - NADH:ubiquinone oxidoreductase subunit B1 [Source:NCBI gene;Acc:423415]
73. BBS5 ENSGALG00000009846 344 0.847 - - 0.847 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
74. PRPF38B ENSGALG00000001972 2009 0.847 - - 0.847 - - - - - - - pre-mRNA processing factor 38B
75. GTF2E1 ENSGALG00000042320 7712 0.846 - - 0.846 - - - - - - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
76. IQCD ENSGALG00000037307 642 0.845 - - 0.845 - - - - - - - IQ motif containing D, transcript variant X2
77. MIB1 ENSGALG00000014974 3583 0.845 - - 0.845 - - - - - - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
78. DUSP19 ENSGALG00000043268 5543 0.845 - - 0.845 - - - - - - - dual specificity phosphatase 19 [Source:HGNC Symbol;Acc:HGNC:18894]
79. SEPHS1 ENSGALG00000014575 10701 0.845 - - 0.845 - - - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
80. ADK ENSGALG00000005057 199 0.844 - - 0.844 - - - - - - - adenosine kinase [Source:NCBI gene;Acc:423735]
81. CEP104 ENSGALG00000000978 1130 0.844 - - 0.844 - - - - - - - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
82. GTF2H2 ENSGALG00000002399 2361 0.844 - - 0.844 - - - - - - - general transcription factor IIH subunit 2, transcript variant X2
83. ENSGALG00000004931 ENSGALG00000004931 2737 0.843 - - 0.843 - - - - - - -
84. MYCBP2 ENSGALG00000016915 2374 0.843 - - 0.843 - - - - - - - MYC binding protein 2, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:23386]
85. AMFR ENSGALG00000003107 6560 0.842 - - 0.842 - - - - - - - autocrine motility factor receptor [Source:HGNC Symbol;Acc:HGNC:463]
86. TMEM242 ENSGALG00000013689 377 0.842 - - 0.842 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
87. RALGDS ENSGALG00000003412 4478 0.842 - - 0.842 - - - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
88. SGCE ENSGALG00000009670 3070 0.841 - - 0.841 - - - - - - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
89. HYAL1 ENSGALG00000000785 1778 0.84 - - 0.840 - - - - - - - hyaluronoglucosaminidase 1, transcript variant X3
90. BBX ENSGALG00000015353 1281 0.84 - - 0.840 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
91. RPS6KB1 ENSGALG00000005198 169 0.839 - - 0.839 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
92. C18orf8 C18orf8 1512 0.839 - - 0.839 - - - - - - -
93. APTX ENSGALG00000001954 692 0.839 - - 0.839 - - - - - - - aprataxin [Source:NCBI gene;Acc:395173]
94. OVCA2 ENSGALG00000045371 2862 0.839 - - 0.839 - - - - - - - OVCA2, serine hydrolase domain containing [Source:HGNC Symbol;Acc:HGNC:24203]
95. LXR LXR 2599 0.838 - - 0.838 - - - - - - -
96. AKT3 ENSGALG00000034081 866 0.838 - - 0.838 - - - - - - - AKT serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:393]
97. ZDHHC7 ENSGALG00000042522 1774 0.838 - - 0.838 - - - - - - - zinc finger DHHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:18459]
98. LCMT1 ENSGALG00000005973 1300 0.838 - - 0.838 - - - - - - - leucine carboxyl methyltransferase 1 [Source:NCBI gene;Acc:416565]
99. DDX6 ENSGALG00000033064 2193 0.837 - - 0.837 - - - - - - - DEAD-box helicase 6 [Source:NCBI gene;Acc:419783]
100. ARRDC4 ENSGALG00000007012 1039 0.836 - - 0.836 - - - - - - - arrestin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28087]

There are 331 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA