Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SLIT3

Gene Name Gene ID Reads Annotation
SLIT3 ENSGALG00000001916 738 slit guidance ligand 3 [Source:NCBI gene;Acc:374173]











Genes with expression patterns similar to SLIT3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SLIT3 ENSGALG00000001916 738 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 slit guidance ligand 3 [Source:NCBI gene;Acc:374173]
2. TOR4A ENSGALG00000008623 1364 0.913 - - - - - - - 0.913 - - torsin family 4 member A [Source:HGNC Symbol;Acc:HGNC:25981]
3. HS3ST1 ENSGALG00000014934 182 0.858 - - - - - - - 0.858 - - heparan sulfate-glucosamine 3-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:5194]
4. CACNA2D2 ENSGALG00000038242 2078 0.855 - - - - - - - 0.855 - - calcium voltage-gated channel auxiliary subunit alpha2delta 2 [Source:HGNC Symbol;Acc:HGNC:1400]
5. TRPC4 ENSGALG00000017044 300 0.846 - - - - - - - 0.846 - - transient receptor potential cation channel subfamily C member 4 [Source:HGNC Symbol;Acc:HGNC:12336]
6. EVI5 4722 0.837 - - - - - - - - 0.837 - ecotropic viral integration site 5, transcript variant X1
7. GRIK3 ENSGALG00000002098 111 0.835 - - - - - - - 0.835 - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
8. AK3 ENSGALG00000014447 1855 0.827 - - - - - - - - 0.827 - adenylate kinase 3 [Source:HGNC Symbol;Acc:HGNC:17376]
9. PRCP ENSGALG00000037521 4012 0.816 - - - - - - - 0.816 - - prolylcarboxypeptidase [Source:HGNC Symbol;Acc:HGNC:9344]
10. MYOF ENSGALG00000006705 793 0.815 - - - - - - - 0.815 - - myoferlin [Source:HGNC Symbol;Acc:HGNC:3656]
11. DNASE1L3 386 0.811 - - - - - - - 0.811 - - deoxyribonuclease 1 like 3
12. TMED3 ENSGALG00000008272 2838 0.809 - - - - - - - 0.809 - - transmembrane p24 trafficking protein 3 [Source:NCBI gene;Acc:415580]
13. DENND1A ENSGALG00000001157 503 0.807 - - - - - - - - 0.807 - DENN domain containing 1A [Source:HGNC Symbol;Acc:HGNC:29324]
14. ADI1 ENSGALG00000025796 8636 0.807 - - - - - - - - 0.807 - acireductone dioxygenase 1 [Source:NCBI gene;Acc:421918]
15. LPAR4 ENSGALG00000004121 2543 0.802 - - - - - - - 0.802 - - lysophosphatidic acid receptor 4 [Source:NCBI gene;Acc:422149]
16. U2SURP ENSGALG00000002612 4255 0.798 - - - - - - - - 0.798 - U2 snRNP associated SURP domain containing [Source:HGNC Symbol;Acc:HGNC:30855]
17. ENSGALG00000021024 ENSGALG00000021024 1339 0.797 - - - - - - - - 0.797 -
18. NRP2 ENSGALG00000008621 29 0.796 - - - - - - - 0.796 - - neuropilin 2 [Source:NCBI gene;Acc:374157]
19. MASP1 ENSGALG00000007419 141 0.794 - - - - - - - 0.794 - - mannan binding lectin serine peptidase 1 [Source:NCBI gene;Acc:407088]
20. CHRNA5 ENSGALG00000003021 83 0.79 - - - - - - - 0.790 - - cholinergic receptor nicotinic alpha 5 subunit [Source:NCBI gene;Acc:386577]
21. ARHGAP40 ENSGALG00000003550 484 0.787 - - - - - - - 0.787 - - Rho GTPase activating protein 40 [Source:NCBI gene;Acc:419168]
22. GJC1 ENSGALG00000000997 2279 0.781 - - - - - - - 0.781 - - gap junction protein gamma 1 [Source:NCBI gene;Acc:396501]
23. CX3CR1 ENSGALG00000038000 48 0.781 - - - - - - - 0.781 - - C-X3-C motif chemokine receptor 1 [Source:HGNC Symbol;Acc:HGNC:2558]
24. SLC16A10 ENSGALG00000015040 1236 0.78 - - - - - - - 0.780 - - Gallus gallus solute carrier family 16 member 10 (SLC16A10), mRNA. [Source:RefSeq mRNA;Acc:NM_001321736]
25. ENSGALG00000010911 ENSGALG00000010911 469 0.78 - - - - - - - 0.780 - -
26. SCARB2 ENSGALG00000011499 2763 0.778 - - - - - - - - 0.778 - scavenger receptor class B member 2 [Source:HGNC Symbol;Acc:HGNC:1665]
27. CMTM7 ENSGALG00000011488 1406 0.773 - - - - - - - - 0.773 - CKLF like MARVEL transmembrane domain containing 7 [Source:NCBI gene;Acc:420666]
28. TET1 ENSGALG00000031604 13002 0.771 - - - - - - - - 0.771 - tet methylcytosine dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:29484]
29. SMPDL3A ENSGALG00000030275 246 0.771 - - - - - - - 0.771 - - sphingomyelin phosphodiesterase acid like 3A
30. ENOX1 ENSGALG00000016967 1123 0.771 - - - - - - - - 0.771 - ecto-NOX disulfide-thiol exchanger 1 [Source:HGNC Symbol;Acc:HGNC:25474]
31. OGFOD3 ENSGALG00000001618 2438 0.769 - - - - - - - - 0.769 - 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
32. ZDHHC17 ENSGALG00000010253 2588 0.769 - - - - - - - - 0.769 - zinc finger DHHC-type containing 17 [Source:NCBI gene;Acc:417867]
33. MMP2 ENSGALG00000003580 13120 0.768 - - - - - - - 0.768 - - matrix metallopeptidase 2 [Source:NCBI gene;Acc:386583]
34. AP4E1 2726 0.767 - - - - - - - - 0.767 - adaptor related protein complex 4 epsilon 1 subunit, transcript variant X2
35. APOA1 ENSGALG00000007114 10215 0.764 - - - - - - - - 0.764 - apolipoprotein A1 [Source:NCBI gene;Acc:396536]
36. SYCP3 ENSGALG00000012766 70 0.762 - - - - - - - 0.762 - - synaptonemal complex protein 3, transcript variant X2
37. KRT15 ENSGALG00000019718 64 0.762 - - - - - - - 0.762 - - keratin 15 [Source:NCBI gene;Acc:408040]
38. MMRN2 770 0.762 - - - - - - - 0.762 - - multimerin 2, transcript variant X1
39. TEK ENSGALG00000001840 1365 0.76 - - - - - - - 0.760 - - TEK receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11724]
40. GNG11 ENSGALG00000029899 327 0.759 - - - - - - - 0.759 - - G protein subunit gamma 11 [Source:NCBI gene;Acc:771999]
41. EP4 EP4 486 0.758 - - - - - - - 0.758 - -
42. COL12A1 ENSGALG00000015908 1300 0.754 - - - - - - - 0.754 - - collagen type XII alpha 1 chain [Source:NCBI gene;Acc:395875]
43. MBSP MBSP 5634 0.754 - - - - - - - - 0.754 -
44. ENSGALG00000002852 ENSGALG00000002852 2687 0.752 - - - - - - - - 0.752 -
45. PPP2CA ENSGALG00000006462 26306 0.751 - - - - - - - - 0.751 - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
46. DCAF10 ENSGALG00000005390 214 0.751 - - - - - - - 0.751 - - DDB1 and CUL4 associated factor 10 [Source:HGNC Symbol;Acc:HGNC:23686]
47. MGP ENSGALG00000011740 978 0.749 - - - - - - - 0.749 - - matrix Gla protein [Source:NCBI gene;Acc:395912]
48. gga-mir-6681 ENSGALG00000027840 546 0.745 - - - - - - - - 0.745 - gga-mir-6681 [Source:miRBase;Acc:MI0022502]
49. MST4 MST4 1931 0.743 - - - - - - - - 0.743 -
50. MYO5A ENSGALG00000031987 2469 0.742 - - - - - - - - 0.742 - myosin VA [Source:NCBI gene;Acc:396237]
51. PLCXD3 ENSGALG00000014845 247 0.74 - - - - - - - - 0.740 - phosphatidylinositol specific phospholipase C X domain containing 3 [Source:HGNC Symbol;Acc:HGNC:31822]
52. AS3MT ENSGALG00000008133 795 0.738 - - - - - - - 0.738 - - arsenite methyltransferase [Source:HGNC Symbol;Acc:HGNC:17452]
53. EPHB6 ENSGALG00000014749 30 0.738 - - - - - - - 0.738 - - EPH receptor B6 [Source:NCBI gene;Acc:418308]
54. YBX1 ENSGALG00000004848 20992 0.736 - - - - - - - - 0.736 - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
55. SERINC2 ENSGALG00000021685 1581 0.735 - - - - - - - 0.735 - - serine incorporator 2 [Source:NCBI gene;Acc:419558]
56. BICD1 ENSGALG00000012934 112 0.735 - - - - - - - - 0.735 - BICD cargo adaptor 1 [Source:HGNC Symbol;Acc:HGNC:1049]
57. SEMA4B ENSGALG00000008297 11202 0.732 - - - - - - - 0.732 - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
58. CARHSP1 ENSGALG00000042981 6920 0.732 - - - - - - - - 0.732 - calcium regulated heat stable protein 1 [Source:HGNC Symbol;Acc:HGNC:17150]
59. PLEKHH2 ENSGALG00000009947 6384 0.732 - - - - - - - - 0.732 - pleckstrin homology, MyTH4 and FERM domain containing H2 [Source:HGNC Symbol;Acc:HGNC:30506]
60. ERAP1 ENSGALG00000014684 713 0.732 - - - - - - - - 0.732 - endoplasmic reticulum aminopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:18173]
61. PCMTD1 ENSGALG00000031035 861 0.728 - - - - - - - 0.728 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 [Source:NCBI gene;Acc:421114]
62. RUFY2 1442 0.724 - - - - - - - 0.724 - - RUN and FYVE domain containing 2, transcript variant X1
63. MTSS1 ENSGALG00000041969 1312 0.723 - - - - - - - 0.723 - - MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
64. TOX2 ENSGALG00000003106 2472 0.723 - - - - - - - 0.723 - - TOX high mobility group box family member 2, transcript variant X1
65. CRYBA2 ENSGALG00000011354 14 0.721 - - - - - - - - - 0.721 crystallin beta A2 [Source:NCBI gene;Acc:373999]
66. RPL6 ENSGALG00000004818 253572 0.719 - - - - - - - - 0.719 - ribosomal protein L6 [Source:NCBI gene;Acc:373957]
67. SMAD6 ENSGALG00000025898 3144 0.719 - - - - - - - - 0.719 - SMAD family member 6 [Source:NCBI gene;Acc:374096]
68. SNORA73 SNORA73 1644 0.718 - - - - - - - - 0.718 -
69. TGFBR3 ENSGALG00000006038 2951 0.717 - - - - - - - 0.717 - - transforming growth factor beta receptor 3 [Source:NCBI gene;Acc:374251]
70. NT5C1B ENSGALG00000016471 1378 0.717 - - - - - - - - 0.717 - 5'-nucleotidase, cytosolic IB
71. MYH9 ENSGALG00000043092 3026 0.715 - - - - - - - 0.715 - - myosin, heavy chain 9, non-muscle [Source:NCBI gene;Acc:396469]
72. ERN2 ENSGALG00000027592 186 0.715 - - - - - - - 0.715 - - endoplasmic reticulum to nucleus signaling 2 [Source:NCBI gene;Acc:771230]
73. CYP46A1 ENSGALG00000011162 519 0.713 - - - - - - - 0.713 - - cytochrome P450 family 46 subfamily A member 1 [Source:NCBI gene;Acc:423450]
74. GRK5 ENSGALG00000009403 45 0.713 - - 0.713 - - - - - - - G protein-coupled receptor kinase 5 [Source:HGNC Symbol;Acc:HGNC:4544]
75. SLC10A7 ENSGALG00000010006 2064 0.712 - - - - - - - - 0.712 - solute carrier family 10 member 7 [Source:NCBI gene;Acc:422467]
76. DMD ENSGALG00000016281 5657 0.712 - - - - - - - 0.712 - - dystrophin [Source:NCBI gene;Acc:396236]
77. SEC24D ENSGALG00000011998 68 0.707 - - - - - - - 0.707 - - SEC24 homolog D, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10706]
78. BEND6 ENSGALG00000016283 319 0.705 - - - - - - - 0.705 - - BEN domain containing 6 [Source:HGNC Symbol;Acc:HGNC:20871]
79. ENSGALG00000008755 ENSGALG00000008755 3523 0.705 - - - - - - - 0.705 - -
80. SRP14 ENSGALG00000009592 17828 0.704 - - - - - - - - 0.704 - signal recognition particle 14 [Source:NCBI gene;Acc:423284]
81. FBRSL1 ENSGALG00000002205 561 0.703 - - - - - - - 0.703 - - fibrosin like 1 [Source:HGNC Symbol;Acc:HGNC:29308]
82. PPM1E ENSGALG00000005061 2606 0.702 - - - - - - - - 0.702 - protein phosphatase, Mg2+/Mn2+ dependent 1E [Source:HGNC Symbol;Acc:HGNC:19322]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA