Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SLC6A4

Gene Name Gene ID Reads Annotation
SLC6A4 ENSGALG00000004246 5 solute carrier family 6 member 4 [Source:NCBI gene;Acc:404747]











Genes with expression patterns similar to SLC6A4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SLC6A4 ENSGALG00000004246 5 4 - - 1.000 1.000 - - - 1.000 - 1.000 solute carrier family 6 member 4 [Source:NCBI gene;Acc:404747]
2. SLC6A20 ENSGALG00000039333 1 1.957 - - 0.957 - - - - 1.000 - - solute carrier family 6 member 20 [Source:HGNC Symbol;Acc:HGNC:30927]
3. ADCY7 ENSGALG00000003837 10 1.922 - - 0.922 - - - - 1.000 - - adenylate cyclase 7 [Source:HGNC Symbol;Acc:HGNC:238]
4. NIM1 NIM1 18 1.855 - - 0.855 - - - - 1.000 - -
5. CALCA CALCA 682 1.786 - - - 0.824 - - - 0.962 - -
6. SLC36A4 ENSGALG00000017227 3 1.695 - - 0.957 0.738 - - - - - - solute carrier family 36 member 4 [Source:HGNC Symbol;Acc:HGNC:19660]
7. AMMECR1 ENSGALG00000008074 5 1.65 - - - 0.738 - - - - - 0.912 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 [Source:HGNC Symbol;Acc:HGNC:467]
8. MTMR4 ENSGALG00000001042 4 1.639 - - 0.901 0.738 - - - - - - myotubularin related protein 4 [Source:HGNC Symbol;Acc:HGNC:7452]
9. MLC1 ENSGALG00000040038 206 1.54 - - - 0.754 - - - - - 0.786 megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:HGNC Symbol;Acc:HGNC:17082]
10. NDEL1 ENSGALG00000001163 16 1.516 - - 0.737 - - - - - - 0.779 Gallus gallus nudE neurodevelopment protein 1-like 1 (NDEL1), mRNA. [Source:RefSeq mRNA;Acc:NM_001030696]
11. WDR16 WDR16 22 1.506 - - - 0.738 - - - - - 0.768
12. CR1L ENSGALG00000023950 98 1.489 - - - 0.738 - - - - - 0.751 complement C3b/C4b receptor 1 like [Source:NCBI gene;Acc:419853]
13. SMTN 18 1 - - - - - - - 1.000 - - smoothelin, transcript variant X2
14. ENSGALG00000016393 ENSGALG00000016393 3 1 - - - - - - - 1.000 - -
15. ENSGALG00000018621 ENSGALG00000018621 8 1 - - - - - - - 1.000 - -
16. CBLN1 ENSGALG00000042664 15 1 - - - - - - - 1.000 - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
17. EXOC6B ENSGALG00000016098 3 1 - - - - - - - 1.000 - - exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
18. WDR78 ENSGALG00000045792 6 1 - - - - - - - 1.000 - - WD repeat domain 78 [Source:HGNC Symbol;Acc:HGNC:26252]
19. CNKSR2L ENSGALG00000007028 4 1 - - - - - - - - - 1.000 connector enhancer of kinase suppressor of Ras 2-like
20. BAFF BAFF 40 1 - - - - - - - 1.000 - -
21. PHACTR3 250 1 - - - - - - - 1.000 - - phosphatase and actin regulator 3, transcript variant X4
22. FAM160A1 ENSGALG00000010090 10 1 - - - - - - - 1.000 - - family with sequence similarity 160 member A1 [Source:HGNC Symbol;Acc:HGNC:34237]
23. SPOCK3 ENSGALG00000009568 33 1 - - - - - - - 1.000 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]
24. SLC25A42 ENSGALG00000002621 6 1 - - - - - - - 1.000 - - solute carrier family 25 member 42 [Source:HGNC Symbol;Acc:HGNC:28380]
25. GTF2A1L ENSGALG00000026747 13 1 - - - - - - - 1.000 - - general transcription factor IIA subunit 1 like [Source:NCBI gene;Acc:100534591]
26. GABRG2 ENSGALG00000038042 211 1 - - - - - - - 1.000 - - gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
27. RADIL ENSGALG00000004504 0 1 - - - - - - - 1.000 - - Rap associating with DIL domain [Source:HGNC Symbol;Acc:HGNC:22226]
28. ENSGALG00000028340 ENSGALG00000028340 31 1 - - - - - - - 1.000 - -
29. LOC421081 ENSGALG00000015106 0 1 - - - - - - - 1.000 - - uncharacterized LOC421081, transcript variant X1
30. ENSGALG00000026897 ENSGALG00000026897 6 1 - - - - - - - - - 1.000
31. B3GNTL1 ENSGALG00000001433 22 1 - - - - - - - 1.000 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
32. ENSGALG00000019324 ENSGALG00000019324 0 1 - - - - - - - 1.000 - -
33. SNORA44 SNORA44 29 1 - - - - - - - 1.000 - -
34. ENSGALG00000029114 ENSGALG00000029114 4 1 - - - - - - - 1.000 - -
35. ENSGALG00000007388 ENSGALG00000007388 41 1 - - - - - - - 1.000 - -
36. HPRTL ENSGALG00000005361 31 1 - - - 1.000 - - - - - - hypoxanthine-guanine phosphoribosyltransferase-like, transcript variant X1
37. UNC13B ENSGALG00000002165 3 1 - - - - - - - 1.000 - - unc-13 homolog B [Source:HGNC Symbol;Acc:HGNC:12566]
38. MYLK2 ENSGALG00000006273 5 1 - - - - - - - 1.000 - - myosin light chain kinase 2 [Source:NCBI gene;Acc:396356]
39. ENSGALG00000027059 ENSGALG00000027059 7 1 - - - - - - - - - 1.000
40. STAR ENSGALG00000003242 4 1 - - - - - - - 1.000 - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
41. BMPR1A ENSGALG00000002003 20 1 - - - - - - - 1.000 - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
42. ENSGALG00000025781 ENSGALG00000025781 1 1 - - - - - - - 1.000 - -
43. TSGA10 ENSGALG00000016757 4 1 - - - - - - - 1.000 - - testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]
44. ENSGALG00000027458 ENSGALG00000027458 2 1 - - - - - - - - - 1.000
45. C12orf55 C12orf55 0 1 - - - - - - - 1.000 - -
46. PDCD4 ENSGALG00000008700 574 1 - - - - - - - 1.000 - - programmed cell death 4 [Source:NCBI gene;Acc:374191]
47. WDR90_1 ENSGALG00000028172 2 1 - - - - - - - 1.000 - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
48. BCORL1 ENSGALG00000003976 9 1 - - - - - - - 1.000 - - BCL6 corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:25657]
49. ENSGALG00000022661 ENSGALG00000022661 9 1 - - - - - - - 1.000 - -
50. EPSTI1 ENSGALG00000016964 6 1 - - - - - - - 1.000 - - epithelial stromal interaction 1 [Source:HGNC Symbol;Acc:HGNC:16465]
51. WDR52 WDR52 37 1 - - - - - - - 1.000 - -
52. CPS1 ENSGALG00000002944 2 1 - - - - - - - 1.000 - - carbamoyl-phosphate synthase 1 [Source:NCBI gene;Acc:428994]
53. TGFBR2 ENSGALG00000011442 3 1 - - - - - - - 1.000 - - transforming growth factor beta receptor 2 [Source:NCBI gene;Acc:396399]
54. DOK6 ENSGALG00000013753 2 1 - - - - - - - 1.000 - - docking protein 6 [Source:HGNC Symbol;Acc:HGNC:28301]
55. CTRB2 ENSGALG00000000038 6 1 - - - - - - - 1.000 - - chymotrypsinogen B2 [Source:NCBI gene;Acc:431235]
56. HSPB7L ENSGALG00000028183 795 1 - - - - - - - 1.000 - - heat shock protein beta-7-like
57. EIF4H ENSGALG00000001313 59 1 - - - - - - - 1.000 - - eukaryotic translation initiation factor 4H [Source:NCBI gene;Acc:417490]
58. RASSF7 ENSGALG00000044251 8 1 - - - - - - - - - 1.000 Ras association domain family member 7 [Source:HGNC Symbol;Acc:HGNC:1166]
59. ADCK3 ADCK3 110 1 - - - - - - - 1.000 - -
60. TNFRSF13B ENSGALG00000024122 0 1 - - - - - - - 1.000 - - TNF receptor superfamily member 13B [Source:NCBI gene;Acc:770275]
61. COL15A1 ENSGALG00000034119 9 1 - - - - - - - 1.000 - - collagen type XV alpha 1 chain, transcript variant X6
62. PIFO ENSGALG00000023763 11 1 - - - - - - - - - 1.000 primary cilia formation [Source:HGNC Symbol;Acc:HGNC:27009]
63. GLRA2 ENSGALG00000016571 10 1 - - - - - - - 1.000 - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
64. E2F3 ENSGALG00000012680 21 1 - - - - - - - 1.000 - - E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
65. LICOS LICOS 13 1 - - - - - - - 1.000 - -
66. ENSGALG00000010288 ENSGALG00000010288 3 1 - - - - - - - 1.000 - -
67. RNF17 ENSGALG00000045414 2 1 - - - - - - - 1.000 - - ring finger protein 17, transcript variant X2
68. C14orf159 C14orf159 7 1 - - - - - - - - - 1.000
69. SLC6A11 ENSGALG00000004879 16 1 - - - - - - - 1.000 - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
70. DTX4 ENSGALG00000010835 25 1 - - - - - - - 1.000 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
71. TRAF1 ENSGALG00000001583 3 1 - - - - - - - 1.000 - - TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
72. SESN2_1 ENSGALG00000005648, ENSGALG00000037603 2 1 - - - - - - - 1.000 - - sestrin 2 [Source:HGNC Symbol;Acc:HGNC:20746]
73. CD274 1 1 - - - - - - - - - 1.000 CD274 molecule, transcript variant X4
74. ZNF22 ZNF22 25 1 - - - - - - - 1.000 - -
75. B3GALT6 ENSGALG00000001859 5 1 - - - - - - - 1.000 - - beta-1,3-galactosyltransferase 6
76. L3MBTL1 1 1 - - - - - - - - - 1.000 l(3)mbt-like 1 (Drosophila)
77. TOX3 ENSGALG00000034649 54 1 - - - - - - - 1.000 - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
78. GTF2E1L ENSGALG00000013600 4 1 - - - - - - - - - 1.000 general transcription factor IIE subunit 1-like
79. DSCAM ENSGALG00000016138 16 1 - - - - - - - 1.000 - - DS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]
80. GGT5 ENSGALG00000040504 24 1 - - - - - - - 1.000 - - gamma-glutamyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4260]
81. ENSGALG00000027796 ENSGALG00000027796 7 1 - - - - - - - 1.000 - -
82. CKMT1A ENSGALG00000008352 44 1 - - - - - - - 1.000 - - creatine kinase, mitochondrial 1A [Source:NCBI gene;Acc:374002]
83. OCM2 ENSGALG00000003465 74 1 - - - - - - - 1.000 - - oncomodulin 2 [Source:NCBI gene;Acc:396531]
84. HECA ENSGALG00000013824 14 1 - - - - - - - 1.000 - - hdc homolog, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:21041]
85. CSRP3 ENSGALG00000004044 456 1 - - - - - - - 1.000 - - cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
86. ENSGALG00000026654 ENSGALG00000026654 10 1 - - - - - - - 1.000 - -
87. MUT ENSGALG00000016697 43 1 - - - - - - - 1.000 - - methylmalonyl-CoA mutase [Source:HGNC Symbol;Acc:HGNC:7526]
88. ENSGALG00000014605 ENSGALG00000014605 1 1 - - - - - - - 1.000 - -
89. THRB ENSGALG00000011294 7 1 - - - - - - - 1.000 - - thyroid hormone receptor beta [Source:NCBI gene;Acc:396431]
90. KIAA1199 KIAA1199 6 1 - - - - - - - 1.000 - -
91. HK3 ENSGALG00000027287 20 1 - - - - - - - 1.000 - - hexokinase 3, transcript variant X3
92. TMEM72 ENSGALG00000026808 5 1 - - - - - - - 1.000 - - transmembrane protein 72 [Source:HGNC Symbol;Acc:HGNC:31658]
93. IQSEC3 ENSGALG00000012975 4 1 - - - - - - - 1.000 - - IQ motif and Sec7 domain 3, transcript variant X5
94. MECR ENSGALG00000032763 110 1 - - - - - - - 1.000 - - mitochondrial trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:19691]
95. BTG4 ENSGALG00000007618 2 1 - - - - - - - 1.000 - - BTG anti-proliferation factor 4 [Source:NCBI gene;Acc:419781]
96. TLL2 ENSGALG00000005519 10 1 - - - - - - - 1.000 - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
97. gga-mir-6659 ENSGALG00000028216 6 1 - - - - - - - 1.000 - - gga-mir-6659 [Source:miRBase;Acc:MI0022479]
98. NLGN4 NLGN4 283 1 - - - - - - - 1.000 - -
99. AMER3 ENSGALG00000041501 5 1 - - - - - - - 1.000 - - APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
100. ENSGALG00000005482 ENSGALG00000005482 1 1 - - - - - - - 1.000 - -

There are 297 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA