Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SIX1

Gene Name Gene ID Reads Annotation
SIX1 ENSGALG00000029401 526 SIX homeobox 1 [Source:NCBI gene;Acc:693262]











Genes with expression patterns similar to SIX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SIX1 ENSGALG00000029401 526 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SIX homeobox 1 [Source:NCBI gene;Acc:693262]
2. CABP2 ENSGALG00000037497 329 1 - - - - - - - 1.000 - - calcium binding protein 2 [Source:NCBI gene;Acc:429967]
3. SNORA19 SNORA19 70 0.942 - - - - - - - 0.942 - -
4. DNAJB5 ENSGALG00000001918 81 0.942 - - - - - - - 0.942 - - DnaJ heat shock protein family (Hsp40) member B5 [Source:HGNC Symbol;Acc:HGNC:14887]
5. IL13RA2 ENSGALG00000020316 22 0.942 - - - - - - - 0.942 - - interleukin 13 receptor subunit alpha 2 [Source:NCBI gene;Acc:422219]
6. SH3RF1 ENSGALG00000009692 46 0.942 - - - - - - - 0.942 - - SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
7. ELOVL3 ENSGALG00000025772 212 0.942 - - - - - - - 0.942 - - Gallus gallus ELOVL fatty acid elongase 3 (ELOVL3), mRNA. [Source:RefSeq mRNA;Acc:NM_001318410]
8. HOXD12 ENSGALG00000009274 637 0.917 - - - - - - - 0.917 - - homeobox D12 [Source:NCBI gene;Acc:396178]
9. EBF2 ENSGALG00000000242 753 0.84 - - - - - - - 0.840 - - early B cell factor 2 [Source:NCBI gene;Acc:395176]
10. CKMT2 ENSGALG00000015602 46 0.825 - - - - - - - 0.825 - - creatine kinase, mitochondrial 2 [Source:NCBI gene;Acc:396508]
11. GRIK4 ENSGALG00000006638 22 0.818 - - - - - - - 0.818 - - glutamate ionotropic receptor kainate type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4582]
12. GPR114 GPR114 46 0.818 - - - - - - - 0.818 - -
13. SAMD11 ENSGALG00000034453 43 0.818 - - - - - - - 0.818 - - sterile alpha motif domain containing 11 [Source:NCBI gene;Acc:419434]
14. TIGD3 TIGD3 36 0.818 - - - - - - - 0.818 - -
15. SLC22A13 ENSGALG00000005934 8 0.818 - - - - - - - 0.818 - - solute carrier family 22 member 13
16. IGHMBP2 ENSGALG00000004328 118 0.818 - - - - - - - 0.818 - - immunoglobulin mu DNA binding protein 2 [Source:NCBI gene;Acc:422999]
17. ENSGALG00000001137 ENSGALG00000001137 0 0.818 - - - - - - - 0.818 - -
18. RAB44 ENSGALG00000000544 6 0.818 - - - - - - - 0.818 - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
19. CDK19 ENSGALG00000015051 26 0.818 - - - - - - - 0.818 - - cyclin dependent kinase 19 [Source:HGNC Symbol;Acc:HGNC:19338]
20. PKDCCB ENSGALG00000011166 74 0.818 - - - - - - - 0.818 - - protein kinase domain containing, cytoplasmic b
21. TRIM27.1 ENSGALG00000030397 19 0.818 - - - - - - - 0.818 - - tripartite motif containing 27.1 [Source:NCBI gene;Acc:417042]
22. GPM6A ENSGALG00000043480 2133 0.818 - - - - - - - 0.818 - - glycoprotein M6A [Source:NCBI gene;Acc:422569]
23. MNX1 ENSGALG00000041154 244 0.79 - - - - - - 0.790 - - - motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
24. CADM3 ENSGALG00000036925 1753 0.776 - - - - - - - 0.776 - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
25. PAX-9 PAX-9 491 0.774 - - - - - - - 0.774 - -
26. RADIL ENSGALG00000004504 0 0.768 - - - - - - - 0.768 - - Rap associating with DIL domain [Source:HGNC Symbol;Acc:HGNC:22226]
27. LOC421081 ENSGALG00000015106 0 0.768 - - - - - - - 0.768 - - uncharacterized LOC421081, transcript variant X1
28. ENSGALG00000028340 ENSGALG00000028340 31 0.768 - - - - - - - 0.768 - -
29. GTF2A1L ENSGALG00000026747 13 0.768 - - - - - - - 0.768 - - general transcription factor IIA subunit 1 like [Source:NCBI gene;Acc:100534591]
30. JADE1 ENSGALG00000010214 51 0.768 - - - - - - - 0.768 - - jade family PHD finger 1 [Source:HGNC Symbol;Acc:HGNC:30027]
31. GABRG2 ENSGALG00000038042 211 0.768 - - - - - - - 0.768 - - gamma-aminobutyric acid type A receptor gamma2 subunit [Source:NCBI gene;Acc:396289]
32. BAFF BAFF 40 0.768 - - - - - - - 0.768 - -
33. SLC25A42 ENSGALG00000002621 6 0.768 - - - - - - - 0.768 - - solute carrier family 25 member 42 [Source:HGNC Symbol;Acc:HGNC:28380]
34. FAM160A1 ENSGALG00000010090 10 0.768 - - - - - - - 0.768 - - family with sequence similarity 160 member A1 [Source:HGNC Symbol;Acc:HGNC:34237]
35. SPOCK3 ENSGALG00000009568 33 0.768 - - - - - - - 0.768 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565]
36. PHACTR3 250 0.768 - - - - - - - 0.768 - - phosphatase and actin regulator 3, transcript variant X4
37. SMTN 18 0.768 - - - - - - - 0.768 - - smoothelin, transcript variant X2
38. ENSGALG00000016393 ENSGALG00000016393 3 0.768 - - - - - - - 0.768 - -
39. ENSGALG00000018621 ENSGALG00000018621 8 0.768 - - - - - - - 0.768 - -
40. WDR78 ENSGALG00000045792 6 0.768 - - - - - - - 0.768 - - WD repeat domain 78 [Source:HGNC Symbol;Acc:HGNC:26252]
41. EXOC6B ENSGALG00000016098 3 0.768 - - - - - - - 0.768 - - exocyst complex component 6B [Source:HGNC Symbol;Acc:HGNC:17085]
42. CBLN1 ENSGALG00000042664 15 0.768 - - - - - - - 0.768 - - cerebellin 1 precursor [Source:HGNC Symbol;Acc:HGNC:1543]
43. MYLK2 ENSGALG00000006273 5 0.768 - - - - - - - 0.768 - - myosin light chain kinase 2 [Source:NCBI gene;Acc:396356]
44. ENSGALG00000025781 ENSGALG00000025781 1 0.768 - - - - - - - 0.768 - -
45. TSGA10 ENSGALG00000016757 4 0.768 - - - - - - - 0.768 - - testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]
46. STAR ENSGALG00000003242 4 0.768 - - - - - - - 0.768 - - steroidogenic acute regulatory protein [Source:NCBI gene;Acc:395421]
47. BMPR1A ENSGALG00000002003 20 0.768 - - - - - - - 0.768 - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
48. PDCD4 ENSGALG00000008700 574 0.768 - - - - - - - 0.768 - - programmed cell death 4 [Source:NCBI gene;Acc:374191]
49. C12orf55 C12orf55 0 0.768 - - - - - - - 0.768 - -
50. BCORL1 ENSGALG00000003976 9 0.768 - - - - - - - 0.768 - - BCL6 corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:25657]
51. WDR90_1 ENSGALG00000028172 2 0.768 - - - - - - - 0.768 - - WD repeat domain 90 [Source:HGNC Symbol;Acc:HGNC:26960]
52. ENSGALG00000007388 ENSGALG00000007388 41 0.768 - - - - - - - 0.768 - -
53. ENSGALG00000029114 ENSGALG00000029114 4 0.768 - - - - - - - 0.768 - -
54. UNC13B ENSGALG00000002165 3 0.768 - - - - - - - 0.768 - - unc-13 homolog B [Source:HGNC Symbol;Acc:HGNC:12566]
55. ENSGALG00000019324 ENSGALG00000019324 0 0.768 - - - - - - - 0.768 - -
56. SNORA44 SNORA44 29 0.768 - - - - - - - 0.768 - -
57. SLC6A4 ENSGALG00000004246 5 0.768 - - - - - - - 0.768 - - solute carrier family 6 member 4 [Source:NCBI gene;Acc:404747]
58. B3GNTL1 ENSGALG00000001433 22 0.768 - - - - - - - 0.768 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
59. ENSGALG00000010288 ENSGALG00000010288 3 0.768 - - - - - - - 0.768 - -
60. RNF17 ENSGALG00000045414 2 0.768 - - - - - - - 0.768 - - ring finger protein 17, transcript variant X2
61. COL15A1 ENSGALG00000034119 9 0.768 - - - - - - - 0.768 - - collagen type XV alpha 1 chain, transcript variant X6
62. E2F3 ENSGALG00000012680 21 0.768 - - - - - - - 0.768 - - E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
63. GLRA2 ENSGALG00000016571 10 0.768 - - - - - - - 0.768 - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
64. LICOS LICOS 13 0.768 - - - - - - - 0.768 - -
65. CTRB2 ENSGALG00000000038 6 0.768 - - - - - - - 0.768 - - chymotrypsinogen B2 [Source:NCBI gene;Acc:431235]
66. HSPB7L ENSGALG00000028183 795 0.768 - - - - - - - 0.768 - - heat shock protein beta-7-like
67. EIF4H ENSGALG00000001313 59 0.768 - - - - - - - 0.768 - - eukaryotic translation initiation factor 4H [Source:NCBI gene;Acc:417490]
68. TNFRSF13B ENSGALG00000024122 0 0.768 - - - - - - - 0.768 - - TNF receptor superfamily member 13B [Source:NCBI gene;Acc:770275]
69. ADCK3 ADCK3 110 0.768 - - - - - - - 0.768 - -
70. EPSTI1 ENSGALG00000016964 6 0.768 - - - - - - - 0.768 - - epithelial stromal interaction 1 [Source:HGNC Symbol;Acc:HGNC:16465]
71. ENSGALG00000022661 ENSGALG00000022661 9 0.768 - - - - - - - 0.768 - -
72. WDR52 WDR52 37 0.768 - - - - - - - 0.768 - -
73. DOK6 ENSGALG00000013753 2 0.768 - - - - - - - 0.768 - - docking protein 6 [Source:HGNC Symbol;Acc:HGNC:28301]
74. TGFBR2 ENSGALG00000011442 3 0.768 - - - - - - - 0.768 - - transforming growth factor beta receptor 2 [Source:NCBI gene;Acc:396399]
75. CPS1 ENSGALG00000002944 2 0.768 - - - - - - - 0.768 - - carbamoyl-phosphate synthase 1 [Source:NCBI gene;Acc:428994]
76. OCM2 ENSGALG00000003465 74 0.768 - - - - - - - 0.768 - - oncomodulin 2 [Source:NCBI gene;Acc:396531]
77. CKMT1A ENSGALG00000008352 44 0.768 - - - - - - - 0.768 - - creatine kinase, mitochondrial 1A [Source:NCBI gene;Acc:374002]
78. HECA ENSGALG00000013824 14 0.768 - - - - - - - 0.768 - - hdc homolog, cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:21041]
79. CSRP3 ENSGALG00000004044 456 0.768 - - - - - - - 0.768 - - cysteine and glycine rich protein 3 [Source:NCBI gene;Acc:422979]
80. NIM1 NIM1 18 0.768 - - - - - - - 0.768 - -
81. TOX3 ENSGALG00000034649 54 0.768 - - - - - - - 0.768 - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
82. DSCAM ENSGALG00000016138 16 0.768 - - - - - - - 0.768 - - DS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]
83. ENSGALG00000027796 ENSGALG00000027796 7 0.768 - - - - - - - 0.768 - -
84. GGT5 ENSGALG00000040504 24 0.768 - - - - - - - 0.768 - - gamma-glutamyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4260]
85. B3GALT6 ENSGALG00000001859 5 0.768 - - - - - - - 0.768 - - beta-1,3-galactosyltransferase 6
86. ZNF22 ZNF22 25 0.768 - - - - - - - 0.768 - -
87. SLC6A11 ENSGALG00000004879 16 0.768 - - - - - - - 0.768 - - solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
88. DTX4 ENSGALG00000010835 25 0.768 - - - - - - - 0.768 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
89. TRAF1 ENSGALG00000001583 3 0.768 - - - - - - - 0.768 - - TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
90. SESN2_1 ENSGALG00000005648, ENSGALG00000037603 2 0.768 - - - - - - - 0.768 - - sestrin 2 [Source:HGNC Symbol;Acc:HGNC:20746]
91. BTG4 ENSGALG00000007618 2 0.768 - - - - - - - 0.768 - - BTG anti-proliferation factor 4 [Source:NCBI gene;Acc:419781]
92. TLL2 ENSGALG00000005519 10 0.768 - - - - - - - 0.768 - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
93. NLGN4 NLGN4 283 0.768 - - - - - - - 0.768 - -
94. gga-mir-6659 ENSGALG00000028216 6 0.768 - - - - - - - 0.768 - - gga-mir-6659 [Source:miRBase;Acc:MI0022479]
95. TMEM72 ENSGALG00000026808 5 0.768 - - - - - - - 0.768 - - transmembrane protein 72 [Source:HGNC Symbol;Acc:HGNC:31658]
96. MECR ENSGALG00000032763 110 0.768 - - - - - - - 0.768 - - mitochondrial trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:19691]
97. IQSEC3 ENSGALG00000012975 4 0.768 - - - - - - - 0.768 - - IQ motif and Sec7 domain 3, transcript variant X5
98. ENSGALG00000026654 ENSGALG00000026654 10 0.768 - - - - - - - 0.768 - -
99. MUT ENSGALG00000016697 43 0.768 - - - - - - - 0.768 - - methylmalonyl-CoA mutase [Source:HGNC Symbol;Acc:HGNC:7526]
100. ENSGALG00000014605 ENSGALG00000014605 1 0.768 - - - - - - - 0.768 - -

There are 185 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA