Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for SIX1

Gene Name Gene ID Reads Annotation
SIX1 ENSGALG00000029401 526 SIX homeobox 1 [Source:NCBI gene;Acc:693262]











Genes with expression patterns similar to SIX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. SIX1 ENSGALG00000029401 526 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SIX homeobox 1 [Source:NCBI gene;Acc:693262]
2. CABP2 ENSGALG00000037497 329 1 - - - - - - - 1.000 - - calcium binding protein 2 [Source:NCBI gene;Acc:429967]
3. IL13RA2 ENSGALG00000020316 22 0.942 - - - - - - - 0.942 - - interleukin 13 receptor subunit alpha 2 [Source:NCBI gene;Acc:422219]
4. SH3RF1 ENSGALG00000009692 46 0.942 - - - - - - - 0.942 - - SH3 domain containing ring finger 1 [Source:HGNC Symbol;Acc:HGNC:17650]
5. ELOVL3 ENSGALG00000025772 212 0.942 - - - - - - - 0.942 - - Gallus gallus ELOVL fatty acid elongase 3 (ELOVL3), mRNA. [Source:RefSeq mRNA;Acc:NM_001318410]
6. SNORA19 SNORA19 70 0.942 - - - - - - - 0.942 - -
7. DNAJB5 ENSGALG00000001918 81 0.942 - - - - - - - 0.942 - - DnaJ heat shock protein family (Hsp40) member B5 [Source:HGNC Symbol;Acc:HGNC:14887]
8. HOXD12 ENSGALG00000009274 637 0.917 - - - - - - - 0.917 - - homeobox D12 [Source:NCBI gene;Acc:396178]
9. EBF2 ENSGALG00000000242 753 0.84 - - - - - - - 0.840 - - early B cell factor 2 [Source:NCBI gene;Acc:395176]
10. CKMT2 ENSGALG00000015602 46 0.825 - - - - - - - 0.825 - - creatine kinase, mitochondrial 2 [Source:NCBI gene;Acc:396508]
11. CDK19 ENSGALG00000015051 26 0.818 - - - - - - - 0.818 - - cyclin dependent kinase 19 [Source:HGNC Symbol;Acc:HGNC:19338]
12. TIGD3 TIGD3 36 0.818 - - - - - - - 0.818 - -
13. PKDCCB ENSGALG00000011166 74 0.818 - - - - - - - 0.818 - - protein kinase domain containing, cytoplasmic b
14. SLC22A13 ENSGALG00000005934 8 0.818 - - - - - - - 0.818 - - solute carrier family 22 member 13
15. GPM6A ENSGALG00000043480 2133 0.818 - - - - - - - 0.818 - - glycoprotein M6A [Source:NCBI gene;Acc:422569]
16. TRIM27.1 ENSGALG00000030397 19 0.818 - - - - - - - 0.818 - - tripartite motif containing 27.1 [Source:NCBI gene;Acc:417042]
17. IGHMBP2 ENSGALG00000004328 118 0.818 - - - - - - - 0.818 - - immunoglobulin mu DNA binding protein 2 [Source:NCBI gene;Acc:422999]
18. ENSGALG00000001137 ENSGALG00000001137 0 0.818 - - - - - - - 0.818 - -
19. RAB44 ENSGALG00000000544 6 0.818 - - - - - - - 0.818 - - RAB44, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:21068]
20. GRIK4 ENSGALG00000006638 22 0.818 - - - - - - - 0.818 - - glutamate ionotropic receptor kainate type subunit 4 [Source:HGNC Symbol;Acc:HGNC:4582]
21. GPR114 GPR114 46 0.818 - - - - - - - 0.818 - -
22. SAMD11 ENSGALG00000034453 43 0.818 - - - - - - - 0.818 - - sterile alpha motif domain containing 11 [Source:NCBI gene;Acc:419434]
23. MNX1 ENSGALG00000041154 244 0.79 - - - - - - 0.790 - - - motor neuron and pancreas homeobox 1 [Source:NCBI gene;Acc:395768]
24. CADM3 ENSGALG00000036925 1753 0.776 - - - - - - - 0.776 - - cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:17601]
25. PAX-9 PAX-9 491 0.774 - - - - - - - 0.774 - -
26. TLL2 ENSGALG00000005519 10 0.768 - - - - - - - 0.768 - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
27. gga-mir-6659 ENSGALG00000028216 6 0.768 - - - - - - - 0.768 - - gga-mir-6659 [Source:miRBase;Acc:MI0022479]
28. NLGN4 NLGN4 283 0.768 - - - - - - - 0.768 - -
29. BTG4 ENSGALG00000007618 2 0.768 - - - - - - - 0.768 - - BTG anti-proliferation factor 4 [Source:NCBI gene;Acc:419781]
30. gga-mir-218-1 ENSGALG00000018327 3 0.768 - - - - - - - 0.768 - - gga-mir-218-1 [Source:miRBase;Acc:MI0001212]
31. PPP1R1B ENSGALG00000044406 6 0.768 - - - - - - - 0.768 - - protein phosphatase 1 regulatory inhibitor subunit 1B [Source:HGNC Symbol;Acc:HGNC:9287]
32. ENSGALG00000001345 ENSGALG00000001345 5 0.768 - - - - - - - 0.768 - -
33. B2M ENSGALG00000002160 4 0.768 - - - - - - - 0.768 - - beta-2-microglobulin [Source:NCBI gene;Acc:414830]
34. SLC6A6 ENSGALG00000006425 31 0.768 - - - - - - - 0.768 - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
35. CREB3 ENSGALG00000002523 23 0.768 - - - - - - - 0.768 - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
36. AOC1 13 0.768 - - - - - - - 0.768 - - amine oxidase, copper containing 1, transcript variant X2
37. FHDC1 ENSGALG00000041054 34 0.768 - - - - - - - 0.768 - - FH2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29363]
38. ENSGALG00000028964 ENSGALG00000028964 46 0.768 - - - - - - - 0.768 - -
39. MICALL2 ENSGALG00000004070 23 0.768 - - - - - - - 0.768 - - MICAL like 2 [Source:HGNC Symbol;Acc:HGNC:29672]
40. KIAA0319L ENSGALG00000002445 75 0.768 - - - - - - - 0.768 - - KIAA0319 like [Source:HGNC Symbol;Acc:HGNC:30071]
41. KLHL40 ENSGALG00000005292 61 0.768 - - - - - - - 0.768 - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
42. OTX2 ENSGALG00000034889 8 0.768 - - - - - - - 0.768 - - orthodenticle homeobox 2 [Source:NCBI gene;Acc:395191]
43. ROS1 ENSGALG00000014913 7 0.768 - - - - - - - 0.768 - - ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
44. TMEM72 ENSGALG00000026808 5 0.768 - - - - - - - 0.768 - - transmembrane protein 72 [Source:HGNC Symbol;Acc:HGNC:31658]
45. IQSEC3 ENSGALG00000012975 4 0.768 - - - - - - - 0.768 - - IQ motif and Sec7 domain 3, transcript variant X5
46. MECR ENSGALG00000032763 110 0.768 - - - - - - - 0.768 - - mitochondrial trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:19691]
47. OSBPL3 ENSGALG00000011007 23 0.768 - - - - - - - 0.768 - - oxysterol binding protein like 3 [Source:HGNC Symbol;Acc:HGNC:16370]
48. CBR4 ENSGALG00000009714 7 0.768 - - - - - - - 0.768 - - carbonyl reductase 4 [Source:HGNC Symbol;Acc:HGNC:25891]
49. ENSGALG00000014605 ENSGALG00000014605 1 0.768 - - - - - - - 0.768 - -
50. MPV17L2 ENSGALG00000041429 168 0.768 - - - - - - - 0.768 - - MPV17 mitochondrial inner membrane protein like 2 [Source:HGNC Symbol;Acc:HGNC:28177]
51. GDPD4 ENSGALG00000000690 824 0.768 - - - - - - - 0.768 - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
52. THRB ENSGALG00000011294 7 0.768 - - - - - - - 0.768 - - thyroid hormone receptor beta [Source:NCBI gene;Acc:396431]
53. HK3 ENSGALG00000027287 20 0.768 - - - - - - - 0.768 - - hexokinase 3, transcript variant X3
54. KIAA1199 KIAA1199 6 0.768 - - - - - - - 0.768 - -
55. SKI ENSGALG00000001229 50 0.768 - - - - - - - 0.768 - - SKI proto-oncogene [Source:NCBI gene;Acc:428181]
56. ENSGALG00000026654 ENSGALG00000026654 10 0.768 - - - - - - - 0.768 - -
57. SPG20 22 0.768 - - - - - - - 0.768 - - spastic paraplegia 20 (Troyer syndrome), transcript variant X1
58. MUT ENSGALG00000016697 43 0.768 - - - - - - - 0.768 - - methylmalonyl-CoA mutase [Source:HGNC Symbol;Acc:HGNC:7526]
59. CYBA ENSGALG00000029367 125 0.768 - - - - - - - 0.768 - - cytochrome b-245 alpha chain [Source:HGNC Symbol;Acc:HGNC:2577]
60. VIT ENSGALG00000010583 16 0.768 - - - - - - - 0.768 - - vitrin [Source:NCBI gene;Acc:421471]
61. PTPRO ENSGALG00000013085 26 0.768 - - - - - - - 0.768 - - protein tyrosine phosphatase, receptor type O [Source:NCBI gene;Acc:373911]
62. MMP11 ENSGALG00000005968 3 0.768 - - - - - - - 0.768 - - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
63. KNDC1 ENSGALG00000007007 31 0.768 - - - - - - - 0.768 - - kinase non-catalytic C-lobe domain containing 1, transcript variant X1
64. CYP7B1 ENSGALG00000029435 3 0.768 - - - - - - - 0.768 - - cytochrome P450 family 7 subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:2652]
65. PBEF1 PBEF1 25 0.768 - - - - - - - 0.768 - -
66. ID3 ENSGALG00000035317 52 0.768 - - - - - - - 0.768 - - inhibitor of DNA binding 3, HLH protein [Source:NCBI gene;Acc:395281]
67. MGAT3 ENSGALG00000036743 5 0.768 - - - - - - - 0.768 - - mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:418013]
68. TRAF6 ENSGALG00000007932 12 0.768 - - - - - - - 0.768 - - TNF receptor associated factor 6 [Source:HGNC Symbol;Acc:HGNC:12036]
69. KIAA1755 3 0.768 - - - - - - - 0.768 - - KIAA1755 ortholog, transcript variant X2
70. PPIL6 ENSGALG00000015237 11 0.768 - - - - - - - 0.768 - - peptidylprolyl isomerase like 6 [Source:HGNC Symbol;Acc:HGNC:21557]
71. TCF20 ENSGALG00000011878 69 0.768 - - - - - - - 0.768 - - transcription factor 20 [Source:HGNC Symbol;Acc:HGNC:11631]
72. UHRF1BP1L ENSGALG00000011557 17 0.768 - - - - - - - 0.768 - - UHRF1 binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:29102]
73. TPH1 ENSGALG00000006236 21 0.768 - - - - - - - 0.768 - - tryptophan hydroxylase 1 [Source:NCBI gene;Acc:395799]
74. CD99L2 ENSGALG00000009075 5 0.768 - - - - - - - 0.768 - - CD99 molecule like 2 [Source:HGNC Symbol;Acc:HGNC:18237]
75. ALG12 ENSGALG00000008539 20 0.768 - - - - - - - 0.768 - - ALG12, alpha-1,6-mannosyltransferase [Source:NCBI gene;Acc:417733]
76. FOXI1 ENSGALG00000002105 0 0.768 - - - - - - - 0.768 - - forkhead box I1 [Source:HGNC Symbol;Acc:HGNC:3815]
77. MAP2K1 ENSGALG00000007687 250 0.768 - - - - - - - 0.768 - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
78. ADCY1 ENSGALG00000031170 4 0.768 - - - - - - - 0.768 - - adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]
79. RBM15 ENSGALG00000000401 22 0.768 - - - - - - - 0.768 - - RNA binding motif protein 15 [Source:HGNC Symbol;Acc:HGNC:14959]
80. RMST RMST 2 0.768 - - - - - - - 0.768 - -
81. ANKRD31 46 0.768 - - - - - - - 0.768 - - ankyrin repeat domain 31, transcript variant X2
82. USP19 ENSGALG00000006824 44 0.768 - - - - - - - 0.768 - - ubiquitin specific peptidase 19 [Source:HGNC Symbol;Acc:HGNC:12617]
83. ENSGALG00000010218 ENSGALG00000010218 12 0.768 - - - - - - - 0.768 - -
84. AMER3 ENSGALG00000041501 5 0.768 - - - - - - - 0.768 - - APC membrane recruitment protein 3 [Source:HGNC Symbol;Acc:HGNC:26771]
85. ADCY7 ENSGALG00000003837 10 0.768 - - - - - - - 0.768 - - adenylate cyclase 7 [Source:HGNC Symbol;Acc:HGNC:238]
86. ENSGALG00000005482 ENSGALG00000005482 1 0.768 - - - - - - - 0.768 - -
87. APOD ENSGALG00000006995 2 0.768 - - - - - - - 0.768 - - apolipoprotein D [Source:NCBI gene;Acc:424893]
88. LRP3 ENSGALG00000004853 13 0.768 - - - - - - - 0.768 - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
89. COTL1 ENSGALG00000017644 81 0.768 - - - - - - - 0.768 - - coactosin like F-actin binding protein 1 [Source:NCBI gene;Acc:768420]
90. UNCX ENSGALG00000039292 165 0.768 - - - - - - - 0.768 - - UNC homeobox [Source:HGNC Symbol;Acc:HGNC:33194]
91. RBKS ENSGALG00000010043 3 0.768 - - - - - - - 0.768 - - ribokinase [Source:HGNC Symbol;Acc:HGNC:30325]
92. ZFYVE28 15 0.768 - - - - - - - 0.768 - - zinc finger FYVE-type containing 28, transcript variant X3
93. BLB1 ENSGALG00000000141 13 0.768 - - - - - - - 0.768 - - Major histocompatibility complex class II beta chain BLB1 [Source:NCBI gene;Acc:693256]
94. IL18R1 ENSGALG00000040621 12 0.768 - - - - - - - 0.768 - - interleukin 18 receptor 1 [Source:NCBI gene;Acc:418717]
95. RAI1 ENSGALG00000004888 14 0.768 - - - - - - - 0.768 - - retinoic acid induced 1 [Source:HGNC Symbol;Acc:HGNC:9834]
96. SLC38A10 ENSGALG00000006880 34 0.768 - - - - - - - 0.768 - - solute carrier family 38 member 10 [Source:HGNC Symbol;Acc:HGNC:28237]
97. ENSGALG00000008047 ENSGALG00000008047 13 0.768 - - - - - - - 0.768 - -
98. ABCG1 ENSGALG00000016164 10 0.768 - - - - - - - 0.768 - - ATP binding cassette subfamily G member 1 [Source:HGNC Symbol;Acc:HGNC:73]
99. TNMD ENSGALG00000006821 19 0.768 - - - - - - - 0.768 - - tenomodulin [Source:NCBI gene;Acc:404530]
100. RFX4 ENSGALG00000012647 119 0.768 - - - - - - - 0.768 - - regulatory factor X4 [Source:HGNC Symbol;Acc:HGNC:9985]

There are 185 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA